Your message dated Fri, 03 Feb 2017 15:03:33 +0000 with message-id <e1czfof-000esk...@fasolo.debian.org> and subject line Bug#853892: fixed in bedops 2.4.20+dfsg-2 has caused the Debian Bug report #853892, regarding bedops: /usr/bin/starch is already used by coop-computing-tools to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 853892: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853892 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: bedops Version: 2.4.20+dfsg-1 Severity: serious User: debian...@lists.debian.org Usertags: piuparts Hi, during a test with piuparts I noticed your package failed to install because it tries to overwrite other packages files. Since coop-computing-tools has been in the archive for several years already, bedops will have to rename the conflicting program. >From the attached log (scroll to the bottom...): Selecting previously unselected package bedops. Preparing to unpack .../5-bedops_2.4.20+dfsg-1_amd64.deb ... Unpacking bedops (2.4.20+dfsg-1) ... dpkg: error processing archive /tmp/apt-dpkg-install-W94bnb/5-bedops_2.4.20+dfsg-1_amd64.deb (--unpack): trying to overwrite '/usr/bin/starch', which is also in package coop-computing-tools 4.0-1.1 dpkg-deb: error: subprocess paste was killed by signal (Broken pipe) Errors were encountered while processing: /tmp/apt-dpkg-install-W94bnb/5-bedops_2.4.20+dfsg-1_amd64.deb cheers, Andreas
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--- Begin Message ---Source: bedops Source-Version: 2.4.20+dfsg-2 We believe that the bug you reported is fixed in the latest version of bedops, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 853...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Olivier Sallou <osal...@debian.org> (supplier of updated bedops package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 03 Feb 2017 11:26:22 +0000 Source: bedops Binary: bedops Architecture: source amd64 Version: 2.4.20+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Olivier Sallou <osal...@debian.org> Description: bedops - high-performance genomic feature operations Closes: 853892 854003 Changes: bedops (2.4.20+dfsg-2) unstable; urgency=medium . * avoid underlinking when linking with --as-needed (Closes: #854003) Thanks to gin...@debian.org * rename starch binary to bedops-starch (Closes: #853892) Checksums-Sha1: eefa8e10ccad3cb36d53a67405e6527a56494989 1999 bedops_2.4.20+dfsg-2.dsc 0a40796c25046e77bbb263ad6e55dfe5cdfa5742 5340 bedops_2.4.20+dfsg-2.debian.tar.xz 808abe430a465e7a465a4e27b6c5d739c436d592 3772 bedops-dbgsym_2.4.20+dfsg-2_amd64.deb e6cbf5ef8dad8149a07ec61207b034c6dc6832a7 5756 bedops_2.4.20+dfsg-2_amd64.buildinfo ac9ae123093d841307e30302552f85f59ad30ec9 12524842 bedops_2.4.20+dfsg-2_amd64.deb Checksums-Sha256: 6f10a72834134d1aaa49d5d64f2b577badcb673fdc6d0bc465bbd60d27bb2e4f 1999 bedops_2.4.20+dfsg-2.dsc 882479241291630984a27a3c7183a22226a593024d4dab85a60c66a929460add 5340 bedops_2.4.20+dfsg-2.debian.tar.xz 0f54aab8ba12a39eccec77e4ae29fc0ba9b6aa1d5d27a01601c1e3cc6d2dbd4b 3772 bedops-dbgsym_2.4.20+dfsg-2_amd64.deb 07f1eecdad4c1343283c7abfd7d39297d629a1e5bc583cd4f3cfd729ba218743 5756 bedops_2.4.20+dfsg-2_amd64.buildinfo 8bd94ff15a23b486d85621a5f4c70ad4712af980f08722411b94a81608650b10 12524842 bedops_2.4.20+dfsg-2_amd64.deb Files: 999ddf6510ea342452c5b61dc5f6c308 1999 science optional bedops_2.4.20+dfsg-2.dsc 4d483bedbe9dfe2e1bdb555eff31776a 5340 science optional bedops_2.4.20+dfsg-2.debian.tar.xz 1d4ddf6074bd1072b05d6aa09d4000a3 3772 debug extra bedops-dbgsym_2.4.20+dfsg-2_amd64.deb 1dec25cb11d02ba0610e30ba092a0d27 5756 science optional bedops_2.4.20+dfsg-2_amd64.buildinfo b55dabfc829553bdef06cbf4fcf9cf96 12524842 science optional bedops_2.4.20+dfsg-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJYlJS7AAoJEHjcaNsybYQ4M8AP/AsVsM+AVZjYN8tMlLDpMaZ9 l2IdqyxntYxWc50B7dlCBvZ39vDEnW/Y7P+pFAtA7qVTGNkUEUEJnGqHUpihx7vV i0VzPE6hRDLUSEAC/a4MHtwKkLSVjwTLyUvsUBGYarnWDeouHo4xirkj8YPgdBCi YJClpq57TX1LP5BFmp90f8+OpuxxmwwS6ToqCszvuAbeR1tkNDJ2guePWHjaggLs t2NGKTn2rK1Qf8yZvUsrGG/C0pS0BtDPTsfm7zEtP2z7NOEXd2yGscQNNR/dSB49 Nfh6+KzCPtmS/hYbLcpqS6rUj2Jy1eoRNSA5o+WhmQ7dAK/ggljiiv2tPVKMMHZr xxvaM16liNah7Tc/Oeen2OzJhNQW3PQTQitcR9GxbZo7hvekFhQfLiciMQbICxlL bDIYDjrHop9dgxNYqZFxwvAP6TzfhR5Q+71xxQnNY3NV8aIC0WZ3AejOG2zGNdnx 21NzvEsvWZGo8l2Co1KJ7xSdJqRlsIbWV1nw5u6fh8fDNpr/hd4MOFMB+uuAsx9T wIe6wmZRJagRl+D4toSN64JK3ycBFvddtYY19nstFvAII8EyiNLF6niMkyJobpn1 WDKFTQjLLh6WZUrBkrgQI2yacjKSTOn3MZJZOUOX7ixXE1evCaYqjb7uQMmBYzNq 2HQQ+hxa2Lu/TPZ6Oc+d =3282 -----END PGP SIGNATURE-----
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