Your message dated Sat, 29 Apr 2017 18:05:39 +0000 with message-id <[email protected]> and subject line Bug#861333: fixed in quantlib-swig 1.9-2 has caused the Debian Bug report #861333, regarding r-base: R packages uploaded to Debian before 14 April 2017 that use .C or .Fortran fail to find objects to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 861333: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=861333 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: r-base Version: 3.4.0-1 Severity: normal With current R, R packages built for Debian before the upload of R 3.3.3.20170413-1 on 14 April that use .C or .Fortran do no work properly, because the functions calling .C or .Fortran do not find the compiled objects. Example packages are r-cran-spatial and r-cran-kernsmooth. An example session in a fresh Debian sid chroot: > library(spatial) > example(surf.gls) srf.gl> library(MASS) # for eqscplot srf.gl> data(topo, package="MASS") srf.gl> topo.kr <- surf.gls(2, expcov, topo, d=0.7) Error in surf.gls(2, expcov, topo, d = 0.7) : object 'VR_frset' not found The relevant NEWS entry from R is * Packages which register native routines for .C or .Fortran need to be re-installed for this version (unless installed with R-devel SVN revision r72375 or later). Packages compiled locally can simply be rebuilt using update.packages(lib.loc="/usr/local/lib/R/site-library", checkBuilt=TRUE) However the packages provided by Debian packages are installed in a directory only writable by privileged users. Cheers, Johannes -- System Information: Debian Release: 9.0 APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Kernel: Linux 4.9.0-0.bpo.2-amd64 (SMP w/8 CPU cores) Locale: LANG=C, LC_CTYPE=C (charmap=ANSI_X3.4-1968) Shell: /bin/sh linked to /usr/bin/dash Init: unable to detect Versions of packages r-base depends on: ii r-base-core 3.4.0-1 ii r-recommended 3.4.0-1 Versions of packages r-base recommends: ii r-base-html 3.4.0-1 ii r-doc-html 3.4.0-1 Versions of packages r-base suggests: pn ess <none> pn r-doc-info | r-doc-pdf <none> -- no debconf information
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--- Begin Message ---Source: quantlib-swig Source-Version: 1.9-2 We believe that the bug you reported is fixed in the latest version of quantlib-swig, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Dirk Eddelbuettel <[email protected]> (supplier of updated quantlib-swig package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sat, 29 Apr 2017 11:52:14 -0500 Source: quantlib-swig Binary: quantlib-python Architecture: source amd64 Version: 1.9-2 Distribution: unstable Urgency: medium Maintainer: Dirk Eddelbuettel <[email protected]> Changed-By: Dirk Eddelbuettel <[email protected]> Description: quantlib-python - Python bindings for the Quantlib Quantitative Finance library Closes: 861333 Changes: quantlib-swig (1.9-2) unstable; urgency=medium . * debian/rules: Uncomment call to dh_md5sums (Closes: #861333) Checksums-Sha1: ea4dc796e8e831bd1d9febc98825e207bf1e1a82 1819 quantlib-swig_1.9-2.dsc 7c5f107c3ab82bd55ec8546edb9b1cc11fe03c2e 10053 quantlib-swig_1.9-2.diff.gz 2ff508f49ca8521d9f1bacb6aee5d3167c93d959 14635162 quantlib-python-dbgsym_1.9-2_amd64.deb 73bcaecbb80e3be9f636a65ddd751c0d7fa06d16 2058792 quantlib-python_1.9-2_amd64.deb 2594c6dfdf30ff4de9c8946b638e06f97e468b59 6097 quantlib-swig_1.9-2_amd64.buildinfo Checksums-Sha256: e5d7bf90ba10d6caa252fa9d7e58f803e9171b4046e90b7f6bf7963c57bb81d9 1819 quantlib-swig_1.9-2.dsc cffddabf7bd9693bdf9dbf102474b5893faa289f7589ef0e342d00bd8094b6ce 10053 quantlib-swig_1.9-2.diff.gz 376487359cdc0623dfcf88b24aa15bfcd8c66af8f506ffcb2c69aaa36726212e 14635162 quantlib-python-dbgsym_1.9-2_amd64.deb 34ae2ff532b68d505b224a6e534b59c47dd3dd774e3c221d03615240c5320d9a 2058792 quantlib-python_1.9-2_amd64.deb 3c4190cb3d13273e41f31ab7825a4a1be7e9c8d7b02d9e8ebcd8b831fc3cf42b 6097 quantlib-swig_1.9-2_amd64.buildinfo Files: b15763be2503465b09e7f9bf2e7a9f15 1819 interpreters optional quantlib-swig_1.9-2.dsc c1dc68c736f326a86399ee996e3c4c7a 10053 interpreters optional quantlib-swig_1.9-2.diff.gz 3f4c8135e4c74c8a75785fa319058c72 14635162 debug extra quantlib-python-dbgsym_1.9-2_amd64.deb 32605a3086c62914503bc80473ad0caf 2058792 python optional quantlib-python_1.9-2_amd64.deb 51f40458fa68e43096cd4bb00e61fa50 6097 interpreters optional quantlib-swig_1.9-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQIVAwUBWQTSrKFIn+KrmaIaAQgmsQ/+PGyijDgQVoEV38Gceaw06rLJy8O/W6xA mfN+dY3QrSvmupcR3uuG6JZR2x8RcCkQXNs7gPdZ/jQkBN1Co4E8DZVPxcNMYeJo LAhKWXlFZuTEBQ5aReULcq4t92MgGpYtqqwTp0U8V13vFx3FC6ez6pYN+UHlUJa3 2Qczkmm0A1y2dFfIaBfY9XzVOsf/CSaB2xHk8HOTakdsWtWJvKMP/VP9FDSBIMyG PZ0aeTvWlgQykCzDpkEBt25q+Mt0JEfIryNfPO1PdF9+ezPfMU3+cM9tEr+2otlh 9MMv3QaJ4uDmoZ1P1cY8l6RigGjVcgdTJK3EgrUji9aRr71u3hB2gWXo5wNCRcXL +hr7z8QuaZTCeQd+FGbVtkhDUlqCxpBd5wzFlOV4yLLHCGCnLwPZeNZoa1mKm6na KyiIV5tmKjXo5jdpPk9EON76sWNFXYcdYZZwlhIYIdu41sQrnv8bfUfDlLrvdjni Ow1Hyvfumfgzjj5YrljuZUZvWmO2uj+NNkEMDEM+ptqUU2YSaYy+G1Owql2STWXW R6ULgIy0uGgX54mj9Pcw8B2zkXAYdi0g5tOkqEKhKpsIyYKDqV1rL64eB23uY3RL gE8N0l8Ix3VjNhZlgVPA5CP9hEzFCXm3xvLeOGPNajkiA4yoRLw+UPR7AaSy0W6N F/jjfbQzwbs= =9c2d -----END PGP SIGNATURE-----
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