Source: seqan2 Version: 2.4.0+dfsg-8 Severity: serious Tags: buster sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20180502 qa-ftbfs Justification: FTBFS on amd64
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory > '/<<BUILDDIR>>/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu' > /usr/bin/ctest --force-new-ctest-process -j8 > Test project /<<BUILDDIR>>/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu > Start 1: test_test_align > Start 2: test_test_align_simd_global_equal_length > Start 3: test_test_align_simd_global_equal_length_sse4_host > Start 4: test_test_align_simd_global_equal_length_avx2_host > Start 5: test_test_align_simd_global_variable_length > Start 6: test_test_align_simd_global_variable_length_sse4_host > Start 7: test_test_align_simd_global_variable_length_avx2_host > Start 8: test_test_align_simd_local_equal_length > 1/417 Test #1: test_test_align > ................................................................... Passed > 0.03 sec > Start 9: test_test_align_simd_local_equal_length_sse4_host > 2/417 Test #3: test_test_align_simd_global_equal_length_sse4_host > ................................ Passed 0.06 sec > Start 10: test_test_align_simd_local_equal_length_avx2_host > 3/417 Test #8: test_test_align_simd_local_equal_length > ........................................... Passed 0.04 sec > Start 11: test_test_align_simd_local_variable_length > 4/417 Test #9: test_test_align_simd_local_equal_length_sse4_host > ................................. Passed 0.04 sec > Start 12: test_test_align_simd_local_variable_length_sse4_host > 5/417 Test #4: test_test_align_simd_global_equal_length_avx2_host > ................................ Passed 0.07 sec > Start 13: test_test_align_simd_local_variable_length_avx2_host > 6/417 Test #5: test_test_align_simd_global_variable_length > ....................................... Passed 0.07 sec > Start 14: test_test_align_extend > 7/417 Test #2: test_test_align_simd_global_equal_length > .......................................... Passed 0.08 sec > Start 15: test_align_parallel_data_structures > 8/417 Test #6: test_test_align_simd_global_variable_length_sse4_host > ............................. Passed 0.08 sec > Start 16: test_test_align_parallel_interface > 9/417 Test #10: test_test_align_simd_local_equal_length_avx2_host > ................................. Passed 0.03 sec > Start 17: test_test_align_parallel_interface_sse4_host > 10/417 Test #14: test_test_align_extend > ............................................................ Passed 0.01 > sec > Start 18: test_test_align_parallel_interface_avx2_host > 11/417 Test #7: test_test_align_simd_global_variable_length_avx2_host > ............................. Passed 0.07 sec > Start 19: test_test_align_parallel_algorithm > 12/417 Test #11: test_test_align_simd_local_variable_length > ........................................ Passed 0.03 sec > Start 20: test_test_align_parallel_algorithm_sse4_host > 13/417 Test #12: test_test_align_simd_local_variable_length_sse4_host > .............................. Passed 0.03 sec > Start 21: test_test_align_parallel_algorithm_avx2_host > 14/417 Test #13: test_test_align_simd_local_variable_length_avx2_host > .............................. Passed 0.03 sec > Start 22: test_test_align_profile > 15/417 Test #22: test_test_align_profile > ........................................................... Passed 0.02 > sec > Start 23: test_test_align_split > 16/417 Test #23: test_test_align_split > ............................................................. Passed > 0.02 sec > Start 24: test_test_alignment_free > 17/417 Test #15: test_align_parallel_data_structures > ............................................... Passed 0.16 sec > Start 25: test_test_arg_parse > 18/417 Test #25: test_test_arg_parse > ............................................................... Passed > 0.02 sec > Start 26: test_test_arg_parse_version_check > 19/417 Test #26: test_test_arg_parse_version_check > ................................................. Passed 0.03 sec > Start 27: test_test_bam_io > 20/417 Test #16: test_test_align_parallel_interface > ................................................ Passed 0.29 sec > Start 28: test_test_basic_exception > 21/417 Test #28: test_test_basic_exception > ......................................................... Passed 0.02 sec > Start 29: test_test_basic_metaprogramming > 22/417 Test #29: test_test_basic_metaprogramming > ................................................... Passed 0.02 sec > Start 30: test_test_basic_fundamental > 23/417 Test #30: test_test_basic_fundamental > ....................................................... Passed 0.01 sec > Start 31: test_test_basic_concept > 24/417 Test #31: test_test_basic_concept > ........................................................... Passed 0.00 > sec > Start 32: test_test_basic_alphabet > 25/417 Test #32: test_test_basic_alphabet > .......................................................... Passed 0.01 > sec > Start 33: test_test_basic_aggregate > 26/417 Test #33: test_test_basic_aggregate > ......................................................... Passed 0.01 sec > Start 34: test_test_basic_allocator > 27/417 Test #34: test_test_basic_allocator > ......................................................... Passed 0.01 sec > Start 35: test_test_basic_parallelism > 28/417 Test #35: test_test_basic_parallelism > ....................................................... Passed 0.01 sec > Start 36: test_test_basic_math > 29/417 Test #36: test_test_basic_math > .............................................................. Passed > 0.01 sec > Start 37: test_test_basic_smart_pointer > 30/417 Test #37: test_test_basic_smart_pointer > ..................................................... Passed 0.00 sec > Start 38: test_test_basic_container > 31/417 Test #38: test_test_basic_container > ......................................................... Passed 0.01 sec > Start 39: test_test_basic_proxy > 32/417 Test #19: test_test_align_parallel_algorithm > ................................................ Passed 0.42 sec > Start 40: test_test_basic_iterator > 33/417 Test #39: test_test_basic_proxy > ............................................................. Passed > 0.03 sec > Start 41: test_test_bed_io > 34/417 Test #40: test_test_basic_iterator > .......................................................... Passed 0.01 > sec > Start 42: test_blast > 35/417 Test #41: test_test_bed_io > .................................................................. Passed > 0.01 sec > Start 43: test_test_consensus > 36/417 Test #43: test_test_consensus > ............................................................... Passed > 0.02 sec > Start 44: test_test_consensus_v2 > 37/417 Test #42: test_blast > ........................................................................ > Passed 0.04 sec > Start 45: test_test_find > 38/417 Test #18: test_test_align_parallel_interface_avx2_host > ...................................... Passed 0.62 sec > Start 46: test_test_gff_io > 39/417 Test #46: test_test_gff_io > .................................................................. Passed > 0.03 sec > Start 47: test_test_graph_algorithms > 40/417 Test #47: test_test_graph_algorithms > ........................................................ Passed 0.01 sec > Start 48: test_test_graph_align > 41/417 Test #48: test_test_graph_align > ............................................................. Passed > 0.01 sec > Start 49: test_test_graph_msa > 42/417 Test #17: test_test_align_parallel_interface_sse4_host > ...................................... Passed 0.74 sec > Start 50: test_test_graph_types_property_map > 43/417 Test #50: test_test_graph_types_property_map > ................................................ Passed 0.01 sec > Start 51: test_test_graph_types_derived > 44/417 Test #51: test_test_graph_types_derived > ..................................................... Passed 0.01 sec > Start 52: test_test_graph_types_iterators > 45/417 Test #52: test_test_graph_types_iterators > ................................................... Passed 0.01 sec > Start 53: test_test_graph_types_types > 46/417 Test #53: test_test_graph_types_types > ....................................................... Passed 0.00 sec > Start 54: test_test_graph_types_utils > 47/417 Test #54: test_test_graph_types_utils > ....................................................... Passed 0.00 sec > Start 55: test_test_index_creation > 48/417 Test #44: test_test_consensus_v2 > ............................................................ Passed 0.33 > sec > Start 56: test_test_index_crosscompare_char > 49/417 Test #56: test_test_index_crosscompare_char > ................................................. Passed 0.03 sec > Start 57: test_test_index_crosscompare_char_dfi > 50/417 Test #57: test_test_index_crosscompare_char_dfi > ............................................. Passed 0.02 sec > Start 58: test_test_index_crosscompare_dna > 51/417 Test #20: test_test_align_parallel_algorithm_sse4_host > ...................................... Passed 0.86 sec > Start 59: test_test_index_crosscompare_dna_dfi > 52/417 Test #58: test_test_index_crosscompare_dna > .................................................. Passed 0.04 sec > Start 60: test_test_index_qgram > 53/417 Test #59: test_test_index_crosscompare_dna_dfi > .............................................. Passed 0.02 sec > Start 61: test_test_index_sa_bwtwalk > 54/417 Test #60: test_test_index_qgram > ............................................................. Passed > 0.01 sec > Start 62: test_test_index_shapes > 55/417 Test #62: test_test_index_shapes > ............................................................ Passed 0.01 > sec > Start 63: test_test_index_drawing > 56/417 Test #63: test_test_index_drawing > ........................................................... Passed 0.01 > sec > Start 64: test_test_index_fm_rank_dictionary > 57/417 Test #45: test_test_find > .................................................................... Passed > 0.47 sec > Start 65: test_test_index_fm_sparse_string > 58/417 Test #55: test_test_index_creation > .......................................................... Passed 0.19 > sec > Start 66: test_test_index_base > 59/417 Test #65: test_test_index_fm_sparse_string > .................................................. Passed 0.02 sec > Start 67: test_test_index_fm > 60/417 Test #61: test_test_index_sa_bwtwalk > ........................................................ Passed 0.09 sec > Start 68: test_test_index_bifm > 61/417 Test #21: test_test_align_parallel_algorithm_avx2_host > ...................................... Passed 0.98 sec > Start 69: test_test_index_vstree > 62/417 Test #49: test_test_graph_msa > ............................................................... Passed > 0.37 sec > Start 70: test_test_index_stree_iterators > 63/417 Test #70: test_test_index_stree_iterators > ................................................... Passed 0.06 sec > Start 71: test_test_index_view > 64/417 Test #71: test_test_index_view > .............................................................. Passed > 0.03 sec > Start 72: test_test_index_finder > 65/417 Test #24: test_test_alignment_free > .......................................................... Passed 1.39 > sec > Start 73: test_test_find_backtracking > 66/417 Test #73: test_test_find_backtracking > ....................................................... Passed 0.03 sec > Start 74: test_test_index_repeats > 67/417 Test #74: test_test_index_repeats > ........................................................... Passed 0.33 > sec > Start 75: test_test_journaled_set > 68/417 Test #75: test_test_journaled_set > ........................................................... Passed 0.04 > sec > Start 76: test_test_journaled_string_tree > 69/417 Test #76: test_test_journaled_string_tree > ................................................... Passed 0.01 sec > Start 77: test_test_delta_map > 70/417 Test #77: test_test_delta_map > ............................................................... Passed > 0.01 sec > Start 78: test_journaled_string_tree_traverser > 71/417 Test #64: test_test_index_fm_rank_dictionary > ................................................ Passed 1.13 sec > Start 79: test_journaled_string_tree_find > 72/417 Test #78: test_journaled_string_tree_traverser > .............................................. Passed 0.28 sec > Start 80: test_test_map > 73/417 Test #72: test_test_index_finder > ............................................................ Passed 1.38 > sec > Start 81: test_test_misc > 74/417 Test #81: test_test_misc > .................................................................... Passed > 0.03 sec > Start 82: test_test_modifier > 75/417 Test #82: test_test_modifier > ................................................................ Passed > 0.08 sec > Start 83: test_test_modifier_cyclic_shape > 76/417 Test #83: test_test_modifier_cyclic_shape > ................................................... Passed 0.02 sec > Start 84: test_test_multiple_translation_units > 77/417 Test #84: test_test_multiple_translation_units > .............................................. Passed 0.00 sec > Start 85: test_test_parallel > 78/417 Test #69: test_test_index_vstree > ............................................................ Passed 2.61 > sec > Start 86: test_test_parse_lm > 79/417 Test #86: test_test_parse_lm > ................................................................ Passed > 0.02 sec > Start 87: test_test_pipe > 80/417 Test #80: test_test_map > ..................................................................... > Passed 1.74 sec > Start 88: test_test_platform > 81/417 Test #88: test_test_platform > ................................................................ Passed > 0.02 sec > Start 89: test_test_random > 82/417 Test #89: test_test_random > .................................................................. Passed > 0.03 sec > Start 90: test_test_realign > 83/417 Test #90: test_test_realign > ................................................................. Passed > 0.34 sec > Start 91: test_reduced_aminoacid > 84/417 Test #91: test_reduced_aminoacid > ............................................................ Passed 0.03 > sec > Start 92: test_test_rna_io > 85/417 Test #92: test_test_rna_io > .................................................................. Passed > 0.02 sec > Start 93: test_test_roi_io > 86/417 Test #93: test_test_roi_io > .................................................................. Passed > 0.00 sec > Start 94: test_test_score > 87/417 Test #94: test_test_score > ................................................................... Passed > 0.01 sec > Start 95: test_test_seeds_combination > 88/417 Test #95: test_test_seeds_combination > ....................................................... Passed 0.02 sec > Start 96: test_test_seeds_extension > 89/417 Test #96: test_test_seeds_extension > ......................................................... Passed 0.02 sec > Start 97: test_test_seeds_global_chaining > 90/417 Test #97: test_test_seeds_global_chaining > ................................................... Passed 0.00 sec > Start 98: test_test_seeds_seed_base > 91/417 Test #98: test_test_seeds_seed_base > ......................................................... Passed 0.00 sec > Start 99: test_test_seeds_seed_chained > 92/417 Test #99: test_test_seeds_seed_chained > ...................................................... Passed 0.00 sec > Start 100: test_test_seeds_seed_diagonal > 93/417 Test #100: test_test_seeds_seed_diagonal > ..................................................... Passed 0.00 sec > Start 101: test_test_seeds_seed_set_base > 94/417 Test #66: test_test_index_base > .............................................................. Passed > 3.46 sec > Start 102: test_test_seeds_seed_set_unordered > 95/417 Test #101: test_test_seeds_seed_set_base > ..................................................... Passed 0.02 sec > Start 103: test_test_seeds_align_banded_chain_impl > 96/417 Test #102: test_test_seeds_seed_set_unordered > ................................................ Passed 0.04 sec > Start 104: test_test_seeds_banded_chain_alignment_interface > 97/417 Test #103: test_test_seeds_align_banded_chain_impl > ........................................... Passed 0.06 sec > Start 105: test_test_seq_io > 98/417 Test #104: test_test_seeds_banded_chain_alignment_interface > .................................. Passed 0.06 sec > Start 106: test_test_sequence > 99/417 Test #106: test_test_sequence > ................................................................ Passed > 0.03 sec > Start 107: test_test_sequence_v2 > 100/417 Test #105: test_test_seq_io > .................................................................. Passed > 0.14 sec > Start 108: test_test_stringset_v2 > 101/417 Test #108: test_test_stringset_v2 > ............................................................ Passed 0.06 > sec > Start 109: test_test_sequence_journaled > 102/417 Test #109: test_test_sequence_journaled > ...................................................... Passed 0.02 sec > Start 110: test_test_simd_vector > 103/417 Test #110: test_test_simd_vector > ............................................................. Passed > 0.02 sec > Start 111: test_test_simd_vector_sse4_host > 104/417 Test #87: test_test_pipe > .................................................................... Passed > 1.12 sec > Start 112: test_test_simd_vector_avx2_host > 105/417 Test #111: test_test_simd_vector_sse4_host > ................................................... Passed 0.03 sec > Start 113: test_test_simple_intervals_io > 106/417 Test #112: test_test_simd_vector_avx2_host > ................................................... Passed 0.02 sec > Start 114: test_test_statistics > 107/417 Test #113: test_test_simple_intervals_io > ..................................................... Passed 0.03 sec > Start 115: test_test_store > 108/417 Test #114: test_test_statistics > .............................................................. Passed > 0.04 sec > Start 116: test_test_stream > 109/417 Test #107: test_test_sequence_v2 > ............................................................. Passed > 0.58 sec > Start 117: test_test_find_swift > 110/417 Test #117: test_test_find_swift > .............................................................. Passed > 0.03 sec > Start 118: test_test_tabix_io > 111/417 Test #118: test_test_tabix_io > ................................................................ Passed > 0.20 sec > Start 119: test_translation > 112/417 Test #115: test_test_store > ................................................................... Passed > 0.70 sec > Start 120: test_ucsc_io > 113/417 Test #120: test_ucsc_io > ...................................................................... > Passed 0.02 sec > Start 121: test_test_vcf_io > 114/417 Test #121: test_test_vcf_io > .................................................................. Passed > 0.01 sec > Start 122: test_demo_dox_align_align > 115/417 Test #122: test_demo_dox_align_align > ......................................................... Passed 0.10 sec > Start 123: test_demo_dox_align_compute_alignment_stats > 116/417 Test #123: test_demo_dox_align_compute_alignment_stats > ....................................... Passed 0.11 sec > Start 124: test_demo_dox_align_gaps_example > 117/417 Test #124: test_demo_dox_align_gaps_example > .................................................. Passed 0.04 sec > Start 125: test_demo_dox_align_global_alignment_banded > 118/417 Test #125: test_demo_dox_align_global_alignment_banded > ....................................... Passed 0.12 sec > Start 126: test_demo_dox_align_global_alignment_unbanded > 119/417 Test #126: test_demo_dox_align_global_alignment_unbanded > ..................................... Passed 0.07 sec > Start 127: test_demo_dox_align_integrate_align > 120/417 Test #119: test_translation > .................................................................. Passed > 0.71 sec > Start 128: test_demo_dox_align_extend_extend_alignment > 121/417 Test #127: test_demo_dox_align_integrate_align > ............................................... Passed 0.11 sec > Start 129: test_demo_dox_align_split_split_alignment > 122/417 Test #128: test_demo_dox_align_extend_extend_alignment > ....................................... Passed 0.07 sec > Start 130: test_demo_dox_bam_io_bam_tags_dict > 123/417 Test #130: test_demo_dox_bam_io_bam_tags_dict > ................................................ Passed 0.06 sec > Start 131: test_demo_dox_basic_zip_iterator > 124/417 Test #129: test_demo_dox_align_split_split_alignment > ......................................... Passed 0.14 sec > Start 132: test_demo_dox_consensus_consensus_alignment > 125/417 Test #131: test_demo_dox_basic_zip_iterator > .................................................. Passed 0.08 sec > Start 133: test_demo_dox_find_finder_index > 126/417 Test #132: test_demo_dox_consensus_consensus_alignment > ....................................... Passed 0.11 sec > Start 134: test_demo_dox_find_finder_online > 127/417 Test #133: test_demo_dox_find_finder_index > ................................................... Passed 0.09 sec > Start 135: test_demo_dox_graph_algorithms_all_pairs_shortest_path > 128/417 Test #67: test_test_index_fm > ................................................................ Passed > 5.46 sec > Start 136: test_demo_dox_graph_algorithms_bellman_ford_algorithm > 129/417 Test #134: test_demo_dox_find_finder_online > .................................................. Passed 0.08 sec > Start 137: test_demo_dox_graph_algorithms_breadth_first_search > 130/417 Test #135: test_demo_dox_graph_algorithms_all_pairs_shortest_path > ............................ Passed 0.08 sec > Start 138: test_demo_dox_graph_algorithms_dag_shortest_path > 131/417 Test #136: test_demo_dox_graph_algorithms_bellman_ford_algorithm > ............................. Passed 0.06 sec > Start 139: test_demo_dox_graph_algorithms_depth_first_search > 132/417 Test #137: test_demo_dox_graph_algorithms_breadth_first_search > ............................... Passed 0.05 sec > Start 140: test_demo_dox_graph_algorithms_dijkstra > 133/417 Test #138: test_demo_dox_graph_algorithms_dag_shortest_path > .................................. Passed 0.13 sec > Start 141: test_demo_dox_graph_algorithms_floyd_warshall_algorithm > 134/417 Test #140: test_demo_dox_graph_algorithms_dijkstra > ........................................... Passed 0.10 sec > Start 142: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm > 135/417 Test #139: test_demo_dox_graph_algorithms_depth_first_search > ................................. Passed 0.16 sec > Start 143: test_demo_dox_graph_algorithms_kruskals_algorithm > 136/417 Test #141: test_demo_dox_graph_algorithms_floyd_warshall_algorithm > ........................... Passed 0.11 sec > Start 144: test_demo_dox_graph_algorithms_prims_algorithm > 137/417 Test #142: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm > ........................... Passed 0.14 sec > Start 145: > test_demo_dox_graph_algorithms_strongly_connected_components > 138/417 Test #143: test_demo_dox_graph_algorithms_kruskals_algorithm > ................................. Passed 0.10 sec > Start 146: test_demo_dox_graph_algorithms_topological_sort > 139/417 Test #144: test_demo_dox_graph_algorithms_prims_algorithm > .................................... Passed 0.07 sec > Start 147: test_demo_dox_graph_algorithms_transitive_closure > 140/417 Test #146: test_demo_dox_graph_algorithms_topological_sort > ................................... Passed 0.05 sec > Start 148: test_demo_dox_graph_types_graph_algo_dijkstra > 141/417 Test #145: > test_demo_dox_graph_algorithms_strongly_connected_components > ...................... Passed 0.09 sec > Start 149: test_demo_dox_index_begin_atEnd_representative > 142/417 Test #147: test_demo_dox_graph_algorithms_transitive_closure > ................................. Passed 0.07 sec > Start 150: test_demo_dox_index_counting > 143/417 Test #148: test_demo_dox_graph_types_graph_algo_dijkstra > ..................................... Passed 0.06 sec > Start 151: test_demo_dox_index_finder > 144/417 Test #149: test_demo_dox_index_begin_atEnd_representative > .................................... Passed 0.04 sec > Start 152: > test_demo_dox_index_getOccurrences_getFrequency_range_getFibre > 145/417 Test #150: test_demo_dox_index_counting > ...................................................... Passed 0.06 sec > Start 153: test_demo_dox_index_iterator > 146/417 Test #152: > test_demo_dox_index_getOccurrences_getFrequency_range_getFibre > .................... Passed 0.06 sec > Start 154: test_demo_dox_index_iterator_short > 147/417 Test #151: test_demo_dox_index_finder > ........................................................ Passed 0.08 sec > Start 155: test_demo_dox_index_length_countSequences > 148/417 Test #153: test_demo_dox_index_iterator > ...................................................... Passed 0.07 sec > Start 156: test_demo_dox_index_mummy > 149/417 Test #154: test_demo_dox_index_iterator_short > ................................................ Passed 0.05 sec > Start 157: test_demo_dox_index_open_save > 150/417 Test #156: test_demo_dox_index_mummy > ......................................................... Passed 0.05 sec > Start 158: test_demo_dox_index_sufarray > 151/417 Test #155: test_demo_dox_index_length_countSequences > ......................................... Passed 0.08 sec > Start 159: test_demo_dox_index_textAt_indexText_saAt_indexRequire > 152/417 Test #157: test_demo_dox_index_open_save > ..................................................... Passed 0.06 sec > Start 160: test_demo_dox_misc_enumerate_strings > 153/417 Test #158: test_demo_dox_index_sufarray > ...................................................... Passed 0.06 sec > Start 161: test_demo_dox_misc_name_store_cache > 154/417 Test #159: test_demo_dox_index_textAt_indexText_saAt_indexRequire > ............................ Passed 0.06 sec > Start 162: test_demo_dox_modifier_cyclic_shape > 155/417 Test #160: test_demo_dox_misc_enumerate_strings > .............................................. Passed 0.05 sec > Start 163: test_demo_dox_modifier_modified_string > 156/417 Test #161: test_demo_dox_misc_name_store_cache > ............................................... Passed 0.06 sec > Start 164: test_demo_dox_modifier_modified_string_mod_view > 157/417 Test #163: test_demo_dox_modifier_modified_string > ............................................ Passed 0.05 sec > Start 165: test_demo_dox_modifier_modified_string_nested > 158/417 Test #85: test_test_parallel > ................................................................ Passed > 4.50 sec > Start 166: test_demo_dox_parallel_queue_example > 159/417 Test #116: test_test_stream > .................................................................. Passed > 2.38 sec > Start 167: test_demo_dox_parallel_splitter_example > 160/417 Test #164: test_demo_dox_modifier_modified_string_mod_view > ................................... Passed 0.08 sec > Start 168: test_demo_dox_score_score > 161/417 Test #162: test_demo_dox_modifier_cyclic_shape > ............................................... Passed 0.13 sec > Start 169: test_demo_dox_seeds_seeds_chaining > 162/417 Test #165: test_demo_dox_modifier_modified_string_nested > ..................................... Passed 0.11 sec > Start 170: test_demo_dox_seeds_seeds_extension > 163/417 Test #166: test_demo_dox_parallel_queue_example > .............................................. Passed 0.08 sec > Start 171: test_demo_dox_seq_io_fai_index_example > 164/417 Test #167: test_demo_dox_parallel_splitter_example > ........................................... Passed 0.09 sec > Start 172: test_demo_dox_sequence_container_view_zip > 165/417 Test #169: test_demo_dox_seeds_seeds_chaining > ................................................ Passed 0.08 sec > Start 173: test_demo_dox_sequence_string2 > 166/417 Test #172: test_demo_dox_sequence_container_view_zip > ......................................... Passed 0.05 sec > Start 174: test_demo_dox_sequence_stringset > 167/417 Test #171: test_demo_dox_seq_io_fai_index_example > ............................................ Passed 0.09 sec > Start 175: test_demo_dox_stream_lexical_cast > 168/417 Test #168: test_demo_dox_score_score > ......................................................... Passed 0.16 sec > Start 176: test_demo_howto_align_gaps_clipping > 169/417 Test #170: test_demo_dox_seeds_seeds_extension > ............................................... Passed 0.15 sec > Start 177: test_demo_howto_custom_file_endings > 170/417 Test #173: test_demo_dox_sequence_string2 > .................................................... Passed 0.09 sec > Start 178: test_demo_howto_filter_similar_sequences > 171/417 Test #174: test_demo_dox_sequence_stringset > .................................................. Passed 0.08 sec > Start 179: test_demo_howto_scores_init_score > 172/417 Test #175: test_demo_dox_stream_lexical_cast > ................................................. Passed 0.09 sec > Start 180: test_demo_howto_scores_load_score > 173/417 Test #176: test_demo_howto_align_gaps_clipping > ............................................... Passed 0.08 sec > Start 181: test_demo_tutorial_a_first_example_basic_code > 174/417 Test #177: test_demo_howto_custom_file_endings > ............................................... Passed 0.07 sec > Start 182: test_demo_tutorial_a_first_example_basic_code_detailed > 175/417 Test #178: test_demo_howto_filter_similar_sequences > .......................................... Passed 0.08 sec > Start 183: test_demo_tutorial_a_first_example_code_encapsulation > 176/417 Test #179: test_demo_howto_scores_init_score > ................................................. Passed 0.08 sec > Start 184: test_demo_tutorial_a_first_example_final_result > 177/417 Test #181: test_demo_tutorial_a_first_example_basic_code > ..................................... Passed 0.06 sec > Start 185: test_demo_tutorial_a_first_example_solution_1 > 178/417 Test #180: test_demo_howto_scores_load_score > ................................................. Passed 0.08 sec > Start 186: test_demo_tutorial_a_first_example_solution_2 > 179/417 Test #182: test_demo_tutorial_a_first_example_basic_code_detailed > ............................ Passed 0.07 sec > Start 187: test_demo_tutorial_a_first_example_solution_3 > 180/417 Test #183: test_demo_tutorial_a_first_example_code_encapsulation > ............................. Passed 0.08 sec > Start 188: test_demo_tutorial_a_first_example_solution_4 > 181/417 Test #184: test_demo_tutorial_a_first_example_final_result > ................................... Passed 0.07 sec > Start 189: test_demo_tutorial_a_first_example_solution_5 > 182/417 Test #186: test_demo_tutorial_a_first_example_solution_2 > ..................................... Passed 0.08 sec > Start 190: test_demo_tutorial_a_first_example_solution_6 > 183/417 Test #187: test_demo_tutorial_a_first_example_solution_3 > ..................................... Passed 0.08 sec > Start 191: test_demo_tutorial_alignment_align > 184/417 Test #188: test_demo_tutorial_a_first_example_solution_4 > ..................................... Passed 0.06 sec > Start 192: test_demo_tutorial_alignment_align_assignment1 > 185/417 Test #189: test_demo_tutorial_a_first_example_solution_5 > ..................................... Passed 0.07 sec > Start 193: test_demo_tutorial_alignment_graph > 186/417 Test #185: test_demo_tutorial_a_first_example_solution_1 > ..................................... Passed 0.16 sec > Start 194: test_demo_tutorial_alignment_graph_assignment1 > 187/417 Test #190: test_demo_tutorial_a_first_example_solution_6 > ..................................... Passed 0.09 sec > Start 195: test_demo_tutorial_alignment_scoring_scheme_affine_dgs > 188/417 Test #191: test_demo_tutorial_alignment_align > ................................................ Passed 0.10 sec > Start 196: test_demo_tutorial_alignment_scoring_scheme_matrix > 189/417 Test #192: test_demo_tutorial_alignment_align_assignment1 > .................................... Passed 0.11 sec > Start 197: test_demo_tutorial_alignment_scoring_scheme_simple > 190/417 Test #194: test_demo_tutorial_alignment_graph_assignment1 > .................................... Passed 0.07 sec > Start 198: test_demo_tutorial_alphabets_assignment_1 > 191/417 Test #193: test_demo_tutorial_alignment_graph > ................................................ Passed 0.10 sec > Start 199: test_demo_tutorial_alphabets_assignment_1_solution > 192/417 Test #195: test_demo_tutorial_alignment_scoring_scheme_affine_dgs > ............................ Passed 0.07 sec > Start 200: test_demo_tutorial_alphabets_example_bitsPerValue > 193/417 Test #196: test_demo_tutorial_alignment_scoring_scheme_matrix > ................................ Passed 0.06 sec > Start 201: test_demo_tutorial_alphabets_example_ordValue > 194/417 Test #198: test_demo_tutorial_alphabets_assignment_1 > ......................................... Passed 0.06 sec > Start 202: test_demo_tutorial_alphabets_example_size > 195/417 Test #197: test_demo_tutorial_alignment_scoring_scheme_simple > ................................ Passed 0.08 sec > Start 203: test_demo_tutorial_background_and_motivation_example > 196/417 Test #200: test_demo_tutorial_alphabets_example_bitsPerValue > ................................. Passed 0.07 sec > Start 204: test_demo_tutorial_basic_techniques_base > 197/417 Test #201: test_demo_tutorial_alphabets_example_ordValue > ..................................... Passed 0.07 sec > Start 205: test_demo_tutorial_basics_allocator > 198/417 Test #199: test_demo_tutorial_alphabets_assignment_1_solution > ................................ Passed 0.12 sec > Start 206: test_demo_tutorial_basics_base > 199/417 Test #202: test_demo_tutorial_alphabets_example_size > ......................................... Passed 0.07 sec > Start 207: test_demo_tutorial_basics_show_alphabets > 200/417 Test #204: test_demo_tutorial_basic_techniques_base > .......................................... Passed 0.06 sec > Start 208: test_demo_tutorial_basics_strings > 201/417 Test #203: test_demo_tutorial_background_and_motivation_example > .............................. Passed 0.11 sec > Start 209: test_demo_tutorial_bed_io_base > 202/417 Test #206: test_demo_tutorial_basics_base > .................................................... Passed 0.09 sec > Start 210: test_demo_tutorial_bed_io_example1 > 203/417 Test #208: test_demo_tutorial_basics_strings > ................................................. Passed 0.09 sec > Start 211: test_demo_tutorial_bed_io_solution1 > 204/417 Test #207: test_demo_tutorial_basics_show_alphabets > .......................................... Passed 0.11 sec > Start 212: test_demo_tutorial_bed_io_solution2 > 205/417 Test #210: test_demo_tutorial_bed_io_example1 > ................................................ Passed 0.08 sec > Start 213: test_demo_tutorial_bed_io_solution3 > 206/417 Test #209: test_demo_tutorial_bed_io_base > .................................................... Passed 0.12 sec > Start 214: test_demo_tutorial_blast_io_read_assignment > 207/417 Test #211: test_demo_tutorial_bed_io_solution1 > ............................................... Passed 0.09 sec > Start 215: test_demo_tutorial_blast_io_write_assignment > 208/417 Test #212: test_demo_tutorial_bed_io_solution2 > ............................................... Passed 0.10 sec > Start 216: test_demo_tutorial_consensus_alignment_with_positions > 209/417 Test #214: test_demo_tutorial_blast_io_read_assignment > ....................................... Passed 0.07 sec > Start 217: test_demo_tutorial_consensus_alignment_without_positions > 210/417 Test #205: test_demo_tutorial_basics_allocator > ............................................... Passed 0.29 sec > Start 218: test_demo_tutorial_file_io_overview_example1 > 211/417 Test #213: test_demo_tutorial_bed_io_solution3 > ............................................... Passed 0.11 sec > Start 219: test_demo_tutorial_file_io_overview_solution1 > 212/417 Test #215: test_demo_tutorial_blast_io_write_assignment > ...................................... Passed 0.09 sec > Start 220: test_demo_tutorial_file_io_overview_solution2 > 213/417 Test #216: test_demo_tutorial_consensus_alignment_with_positions > ............................. Passed 0.09 sec > Start 221: test_demo_tutorial_file_io_overview_solution3 > 214/417 Test #217: test_demo_tutorial_consensus_alignment_without_positions > .......................... Passed 0.07 sec > Start 222: test_demo_tutorial_fragment_store_access_aligned_reads > 215/417 Test #218: test_demo_tutorial_file_io_overview_example1 > ...................................... Passed 0.11 sec > Start 223: test_demo_tutorial_fragment_store_access_aligned_reads2 > 216/417 Test #220: test_demo_tutorial_file_io_overview_solution2 > ..................................... Passed 0.12 sec > Start 224: test_demo_tutorial_fragment_store_base > 217/417 Test #221: test_demo_tutorial_file_io_overview_solution3 > ..................................... Passed 0.12 sec > Start 225: test_demo_tutorial_fragment_store_display_aligned_reads > 218/417 Test #219: test_demo_tutorial_file_io_overview_solution1 > ..................................... Passed 0.17 sec > Start 226: test_demo_tutorial_generic_programming_example_hashing > 219/417 Test #222: test_demo_tutorial_fragment_store_access_aligned_reads > ............................ Passed 0.14 sec > Start 227: test_demo_tutorial_generic_programming_template_subclassing > 220/417 Test #224: test_demo_tutorial_fragment_store_base > ............................................ Passed 0.10 sec > Start 228: test_demo_tutorial_genome_annotations_assignment_1_hint > 221/417 Test #223: test_demo_tutorial_fragment_store_access_aligned_reads2 > ........................... Passed 0.16 sec > Start 229: test_demo_tutorial_genome_annotations_assignment_1_solution > 222/417 Test #225: test_demo_tutorial_fragment_store_display_aligned_reads > ........................... Passed 0.12 sec > Start 230: test_demo_tutorial_genome_annotations_assignment_2_solution > 223/417 Test #226: test_demo_tutorial_generic_programming_example_hashing > ............................ Passed 0.12 sec > Start 231: test_demo_tutorial_genome_annotations_assignment_3_solution > 224/417 Test #227: > test_demo_tutorial_generic_programming_template_subclassing > ....................... Passed 0.10 sec > Start 232: test_demo_tutorial_genome_annotations_assignment_4_solution > 225/417 Test #228: test_demo_tutorial_genome_annotations_assignment_1_hint > ........................... Passed 0.07 sec > Start 233: test_demo_tutorial_genome_annotations_base > 226/417 Test #230: > test_demo_tutorial_genome_annotations_assignment_2_solution > ....................... Passed 0.10 sec > Start 234: test_demo_tutorial_gff_and_gtf_io_base > 227/417 Test #229: > test_demo_tutorial_genome_annotations_assignment_1_solution > ....................... Passed 0.12 sec > Start 235: test_demo_tutorial_gff_and_gtf_io_example1 > 228/417 Test #231: > test_demo_tutorial_genome_annotations_assignment_3_solution > ....................... Passed 0.11 sec > Start 236: test_demo_tutorial_gff_and_gtf_io_example2 > 229/417 Test #233: test_demo_tutorial_genome_annotations_base > ........................................ Passed 0.11 sec > Start 237: test_demo_tutorial_gff_and_gtf_io_solution1 > 230/417 Test #232: > test_demo_tutorial_genome_annotations_assignment_4_solution > ....................... Passed 0.16 sec > Start 238: test_demo_tutorial_gff_and_gtf_io_solution2 > 231/417 Test #234: test_demo_tutorial_gff_and_gtf_io_base > ............................................ Passed 0.07 sec > Start 239: test_demo_tutorial_gff_and_gtf_io_solution3 > 232/417 Test #236: test_demo_tutorial_gff_and_gtf_io_example2 > ........................................ Passed 0.07 sec > Start 240: test_demo_tutorial_graph_graph_algo_scc > 233/417 Test #235: test_demo_tutorial_gff_and_gtf_io_example1 > ........................................ Passed 0.11 sec > Start 241: test_demo_tutorial_graph_graph_dijkstra > 234/417 Test #237: test_demo_tutorial_gff_and_gtf_io_solution1 > ....................................... Passed 0.10 sec > Start 242: test_demo_tutorial_graph_graph_hmm > 235/417 Test #239: test_demo_tutorial_gff_and_gtf_io_solution3 > ....................................... Passed 0.08 sec > Start 243: test_demo_tutorial_graph_solution_1 > 236/417 Test #238: test_demo_tutorial_gff_and_gtf_io_solution2 > ....................................... Passed 0.13 sec > Start 244: test_demo_tutorial_index_iterators_index_assignment1 > 237/417 Test #240: test_demo_tutorial_graph_graph_algo_scc > ........................................... Passed 0.14 sec > Start 245: test_demo_tutorial_index_iterators_index_assignment2 > 238/417 Test #242: test_demo_tutorial_graph_graph_hmm > ................................................ Passed 0.12 sec > Start 246: > test_demo_tutorial_index_iterators_index_bidirectional_search > 239/417 Test #241: test_demo_tutorial_graph_graph_dijkstra > ........................................... Passed 0.15 sec > Start 247: test_demo_tutorial_index_iterators_index_preorder > 240/417 Test #243: test_demo_tutorial_graph_solution_1 > ............................................... Passed 0.14 sec > Start 248: test_demo_tutorial_index_iterators_index_property_maps > 241/417 Test #244: test_demo_tutorial_index_iterators_index_assignment1 > .............................. Passed 0.10 sec > Start 249: test_demo_tutorial_index_iterators_index_search > 242/417 Test #245: test_demo_tutorial_index_iterators_index_assignment2 > .............................. Passed 0.10 sec > Start 250: test_demo_tutorial_index_iterators_index_search2 > 243/417 Test #246: > test_demo_tutorial_index_iterators_index_bidirectional_search > ..................... Passed 0.08 sec > Start 251: test_demo_tutorial_index_iterators_iterator_assignment2 > 244/417 Test #247: test_demo_tutorial_index_iterators_index_preorder > ................................. Passed 0.06 sec > Start 252: test_demo_tutorial_index_iterators_iterator_solution1 > 245/417 Test #251: test_demo_tutorial_index_iterators_iterator_assignment2 > ........................... Passed 0.08 sec > Start 253: test_demo_tutorial_index_iterators_iterator_solution2 > 246/417 Test #252: test_demo_tutorial_index_iterators_iterator_solution1 > ............................. Passed 0.06 sec > Start 254: test_demo_tutorial_index_iterators_iterator_solution3 > 247/417 Test #249: test_demo_tutorial_index_iterators_index_search > ................................... Passed 0.11 sec > Start 255: test_demo_tutorial_indexed_fasta_io_base > 248/417 Test #250: test_demo_tutorial_index_iterators_index_search2 > .................................. Passed 0.12 sec > Start 256: test_demo_tutorial_indexed_fasta_io_solution1 > 249/417 Test #254: test_demo_tutorial_index_iterators_iterator_solution3 > ............................. Passed 0.06 sec > Start 257: test_demo_tutorial_indexed_fasta_io_solution2 > 250/417 Test #248: test_demo_tutorial_index_iterators_index_property_maps > ............................ Passed 0.19 sec > Start 258: test_demo_tutorial_indices_assignment_1 > 251/417 Test #255: test_demo_tutorial_indexed_fasta_io_base > .......................................... Passed 0.06 sec > Start 259: test_demo_tutorial_indices_assignment_2 > 252/417 Test #253: test_demo_tutorial_index_iterators_iterator_solution2 > ............................. Passed 0.09 sec > Start 260: test_demo_tutorial_indices_base > 253/417 Test #256: test_demo_tutorial_indexed_fasta_io_solution1 > ..................................... Passed 0.09 sec > Start 261: test_demo_tutorial_iterators_assignment_1 > 254/417 Test #257: test_demo_tutorial_indexed_fasta_io_solution2 > ..................................... Passed 0.08 sec > Start 262: test_demo_tutorial_iterators_assignment_1_solution > 255/417 Test #259: test_demo_tutorial_indices_assignment_2 > ........................................... Passed 0.09 sec > Start 263: test_demo_tutorial_iterators_assignment_2_solution > 256/417 Test #258: test_demo_tutorial_indices_assignment_1 > ........................................... Passed 0.12 sec > Start 264: test_demo_tutorial_iterators_assignment_3_workshop > 257/417 Test #260: test_demo_tutorial_indices_base > ................................................... Passed 0.10 sec > Start 265: test_demo_tutorial_iterators_assignment_3_workshop_solution > 258/417 Test #262: test_demo_tutorial_iterators_assignment_1_solution > ................................ Passed 0.09 sec > Start 266: test_demo_tutorial_iterators_assignment_4_workshop_solution > 259/417 Test #263: test_demo_tutorial_iterators_assignment_2_solution > ................................ Passed 0.06 sec > Start 267: test_demo_tutorial_iterators_base > 260/417 Test #264: test_demo_tutorial_iterators_assignment_3_workshop > ................................ Passed 0.06 sec > Start 268: test_demo_tutorial_iterators_sequence_iterator_demo > 261/417 Test #261: test_demo_tutorial_iterators_assignment_1 > ......................................... Passed 0.13 sec > Start 269: test_demo_tutorial_journaled_set_base > 262/417 Test #265: > test_demo_tutorial_iterators_assignment_3_workshop_solution > ....................... Passed 0.07 sec > Start 270: test_demo_tutorial_journaled_set_example_join > 263/417 Test #269: test_demo_tutorial_journaled_set_base > ............................................. Passed 0.05 sec > Start 271: > test_demo_tutorial_journaled_set_example_journal_string_basic > 264/417 Test #266: > test_demo_tutorial_iterators_assignment_4_workshop_solution > ....................... Passed 0.08 sec > Start 272: test_demo_tutorial_journaled_set_example_online_search > 265/417 Test #268: test_demo_tutorial_iterators_sequence_iterator_demo > ............................... Passed 0.08 sec > Start 273: > test_demo_tutorial_journaled_set_example_online_search_assignment1_hint > 266/417 Test #270: test_demo_tutorial_journaled_set_example_join > ..................................... Passed 0.06 sec > Start 274: > test_demo_tutorial_journaled_set_solution_online_search_assignment1 > 267/417 Test #271: > test_demo_tutorial_journaled_set_example_journal_string_basic > ..................... Passed 0.04 sec > Start 275: > test_demo_tutorial_journaled_set_solution_online_search_assignment2 > 268/417 Test #267: test_demo_tutorial_iterators_base > ................................................. Passed 0.16 sec > Start 276: > test_demo_tutorial_journaled_set_solution_online_search_assignment3 > 269/417 Test #273: > test_demo_tutorial_journaled_set_example_online_search_assignment1_hint > ........... Passed 0.08 sec > Start 277: > test_demo_tutorial_journaled_set_solution_online_search_assignment4 > 270/417 Test #272: test_demo_tutorial_journaled_set_example_online_search > ............................ Passed 0.32 sec > Start 278: > test_demo_tutorial_journaled_set_solution_online_search_finder > 271/417 Test #274: > test_demo_tutorial_journaled_set_solution_online_search_assignment1 > ............... Passed 0.30 sec > Start 279: > test_demo_tutorial_journaled_string_tree_journaled_string_tree_base > 272/417 Test #276: > test_demo_tutorial_journaled_set_solution_online_search_assignment3 > ............... Passed 0.36 sec > Start 280: > test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 > 273/417 Test #279: > test_demo_tutorial_journaled_string_tree_journaled_string_tree_base > ............... Passed 0.13 sec > Start 281: test_demo_tutorial_metafunctions_assignment1_solution > 274/417 Test #275: > test_demo_tutorial_journaled_set_solution_online_search_assignment2 > ............... Passed 0.44 sec > Start 282: test_demo_tutorial_metafunctions_base > 275/417 Test #281: test_demo_tutorial_metafunctions_assignment1_solution > ............................. Passed 0.11 sec > Start 283: test_demo_tutorial_modifiers_UNUSED_modcomplementdna > 276/417 Test #282: test_demo_tutorial_metafunctions_base > ............................................. Passed 0.12 sec > Start 284: test_demo_tutorial_modifiers_assignment1 > 277/417 Test #277: > test_demo_tutorial_journaled_set_solution_online_search_assignment4 > ............... Passed 0.51 sec > Start 285: test_demo_tutorial_modifiers_assignment1_solution > 278/417 Test #278: > test_demo_tutorial_journaled_set_solution_online_search_finder > ....................***Failed 0.33 sec > Running > /<<BUILDDIR>>/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_finder. > ERROR: Return code of > /<<BUILDDIR>>/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_finder > was -11. > > Start 286: test_demo_tutorial_modifiers_modreverse > 279/417 Test #280: > test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 > ... Passed 0.21 sec > Start 287: test_demo_tutorial_modifiers_modview > 280/417 Test #283: test_demo_tutorial_modifiers_UNUSED_modcomplementdna > .............................. Passed 0.12 sec > Start 288: test_demo_tutorial_modifiers_nested > 281/417 Test #285: test_demo_tutorial_modifiers_assignment1_solution > ................................. Passed 0.09 sec > Start 289: test_demo_tutorial_multiple_sequence_alignment_assignment1 > 282/417 Test #286: test_demo_tutorial_modifiers_modreverse > ........................................... Passed 0.06 sec > Start 290: test_demo_tutorial_multiple_sequence_alignment_consensus > 283/417 Test #287: test_demo_tutorial_modifiers_modview > .............................................. Passed 0.06 sec > Start 291: test_demo_tutorial_multiple_sequence_alignment_msa > 284/417 Test #284: test_demo_tutorial_modifiers_assignment1 > .......................................... Passed 0.13 sec > Start 292: > test_demo_tutorial_pairwise_sequence_alignment_alignment_banded > 285/417 Test #288: test_demo_tutorial_modifiers_nested > ............................................... Passed 0.07 sec > Start 293: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 > 286/417 Test #292: > test_demo_tutorial_pairwise_sequence_alignment_alignment_banded > ................... Passed 0.07 sec > Start 294: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 > 287/417 Test #291: test_demo_tutorial_multiple_sequence_alignment_msa > ................................ Passed 0.09 sec > Start 295: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 > 288/417 Test #289: test_demo_tutorial_multiple_sequence_alignment_assignment1 > ........................ Passed 0.13 sec > Start 296: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap > 289/417 Test #290: test_demo_tutorial_multiple_sequence_alignment_consensus > .......................... Passed 0.13 sec > Start 297: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised > 290/417 Test #293: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 > ....... Passed 0.10 sec > Start 298: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard > 291/417 Test #294: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 > ....... Passed 0.09 sec > Start 299: > test_demo_tutorial_pairwise_sequence_alignment_alignment_local > 292/417 Test #296: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap > ........... Passed 0.06 sec > Start 300: > test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 > 293/417 Test #295: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 > ....... Passed 0.10 sec > Start 301: test_demo_tutorial_pairwise_sequence_alignment_assignment5 > 294/417 Test #297: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised > ....... Passed 0.08 sec > Start 302: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1 > 295/417 Test #298: > test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard > .......... Passed 0.11 sec > Start 303: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2 > 296/417 Test #300: > test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 > ........ Passed 0.08 sec > Start 304: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3 > 297/417 Test #299: > test_demo_tutorial_pairwise_sequence_alignment_alignment_local > .................... Passed 0.09 sec > Start 305: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4 > 298/417 Test #301: test_demo_tutorial_pairwise_sequence_alignment_assignment5 > ........................ Passed 0.11 sec > Start 306: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5 > 299/417 Test #304: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3 > .................. Passed 0.05 sec > Start 307: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6 > 300/417 Test #302: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1 > .................. Passed 0.11 sec > Start 308: test_demo_tutorial_parsing_command_line_arguments_base > 301/417 Test #303: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2 > .................. Passed 0.09 sec > Start 309: test_demo_tutorial_pattern_matching_assignment1 > 302/417 Test #305: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4 > .................. Passed 0.07 sec > Start 310: test_demo_tutorial_pattern_matching_assignment1_solution > 303/417 Test #308: test_demo_tutorial_parsing_command_line_arguments_base > ............................ Passed 0.06 sec > Start 311: test_demo_tutorial_pattern_matching_assignment2 > 304/417 Test #307: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6 > .................. Passed 0.07 sec > Start 312: test_demo_tutorial_pattern_matching_assignment2_solution > 305/417 Test #306: > test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5 > .................. Passed 0.11 sec > Start 313: test_demo_tutorial_pattern_matching_assignment3 > 306/417 Test #309: test_demo_tutorial_pattern_matching_assignment1 > ................................... Passed 0.08 sec > Start 314: test_demo_tutorial_pattern_matching_assignment3_solution > 307/417 Test #310: test_demo_tutorial_pattern_matching_assignment1_solution > .......................... Passed 0.10 sec > Start 315: test_demo_tutorial_pattern_matching_find_approx > 308/417 Test #312: test_demo_tutorial_pattern_matching_assignment2_solution > .......................... Passed 0.08 sec > Start 316: test_demo_tutorial_pattern_matching_find_exact > 309/417 Test #311: test_demo_tutorial_pattern_matching_assignment2 > ................................... Passed 0.11 sec > Start 317: test_demo_tutorial_pattern_matching_find_index > 310/417 Test #315: test_demo_tutorial_pattern_matching_find_approx > ................................... Passed 0.05 sec > Start 318: test_demo_tutorial_pattern_matching_find_index_multiple > 311/417 Test #313: test_demo_tutorial_pattern_matching_assignment3 > ................................... Passed 0.12 sec > Start 319: test_demo_tutorial_q_gram_index_index_assignment5 > 312/417 Test #314: test_demo_tutorial_pattern_matching_assignment3_solution > .......................... Passed 0.12 sec > Start 320: test_demo_tutorial_q_gram_index_index_assignment6 > 313/417 Test #316: test_demo_tutorial_pattern_matching_find_exact > .................................... Passed 0.12 sec > Start 321: test_demo_tutorial_q_gram_index_index_qgram > 314/417 Test #317: test_demo_tutorial_pattern_matching_find_index > .................................... Passed 0.11 sec > Start 322: test_demo_tutorial_q_gram_index_index_qgram_hash > 315/417 Test #318: test_demo_tutorial_pattern_matching_find_index_multiple > ........................... Passed 0.10 sec > Start 323: test_demo_tutorial_realignment_step1 > 316/417 Test #319: test_demo_tutorial_q_gram_index_index_assignment5 > ................................. Passed 0.09 sec > Start 324: test_demo_tutorial_realignment_step2 > 317/417 Test #321: test_demo_tutorial_q_gram_index_index_qgram > ....................................... Passed 0.08 sec > Start 325: test_demo_tutorial_sam_and_bam_io_base > 318/417 Test #320: test_demo_tutorial_q_gram_index_index_assignment6 > ................................. Passed 0.15 sec > Start 326: test_demo_tutorial_sam_and_bam_io_example1 > 319/417 Test #322: test_demo_tutorial_q_gram_index_index_qgram_hash > .................................. Passed 0.10 sec > Start 327: test_demo_tutorial_sam_and_bam_io_example2 > 320/417 Test #323: test_demo_tutorial_realignment_step1 > .............................................. Passed 0.12 sec > Start 328: test_demo_tutorial_sam_and_bam_io_example7 > 321/417 Test #325: test_demo_tutorial_sam_and_bam_io_base > ............................................ Passed 0.09 sec > Start 329: test_demo_tutorial_sam_and_bam_io_solution1 > 322/417 Test #326: test_demo_tutorial_sam_and_bam_io_example1 > ........................................ Passed 0.09 sec > Start 330: test_demo_tutorial_sam_and_bam_io_solution2 > 323/417 Test #327: test_demo_tutorial_sam_and_bam_io_example2 > ........................................ Passed 0.11 sec > Start 331: test_demo_tutorial_sam_and_bam_io_solution3 > 324/417 Test #329: test_demo_tutorial_sam_and_bam_io_solution1 > ....................................... Passed 0.10 sec > Start 332: test_demo_tutorial_seed_and_extend_example1 > 325/417 Test #331: test_demo_tutorial_sam_and_bam_io_solution3 > ....................................... Passed 0.08 sec > Start 333: test_demo_tutorial_seed_and_extend_example2 > 326/417 Test #328: test_demo_tutorial_sam_and_bam_io_example7 > ........................................ Passed 0.19 sec > Start 334: test_demo_tutorial_seed_and_extend_example3 > 327/417 Test #330: test_demo_tutorial_sam_and_bam_io_solution2 > ....................................... Passed 0.13 sec > Start 335: test_demo_tutorial_seed_and_extend_example4 > 328/417 Test #332: test_demo_tutorial_seed_and_extend_example1 > ....................................... Passed 0.09 sec > Start 336: test_demo_tutorial_seed_and_extend_example5 > 329/417 Test #333: test_demo_tutorial_seed_and_extend_example2 > ....................................... Passed 0.11 sec > Start 337: test_demo_tutorial_seed_and_extend_example6 > 330/417 Test #334: test_demo_tutorial_seed_and_extend_example3 > ....................................... Passed 0.11 sec > Start 338: test_demo_tutorial_seed_and_extend_example7 > 331/417 Test #336: test_demo_tutorial_seed_and_extend_example5 > ....................................... Passed 0.09 sec > Start 339: test_demo_tutorial_seed_and_extend_solution1 > 332/417 Test #335: test_demo_tutorial_seed_and_extend_example4 > ....................................... Passed 0.12 sec > Start 340: test_demo_tutorial_seed_and_extend_solution2 > 333/417 Test #337: test_demo_tutorial_seed_and_extend_example6 > ....................................... Passed 0.07 sec > Start 341: test_demo_tutorial_seed_and_extend_solution3 > 334/417 Test #338: test_demo_tutorial_seed_and_extend_example7 > ....................................... Passed 0.10 sec > Start 342: test_demo_tutorial_seed_and_extend_solution4 > 335/417 Test #339: test_demo_tutorial_seed_and_extend_solution1 > ...................................... Passed 0.12 sec > Start 343: test_demo_tutorial_seed_and_extend_solution5 > 336/417 Test #341: test_demo_tutorial_seed_and_extend_solution3 > ...................................... Passed 0.09 sec > Start 344: test_demo_tutorial_seed_and_extend_solution6 > 337/417 Test #340: test_demo_tutorial_seed_and_extend_solution2 > ...................................... Passed 0.14 sec > Start 345: test_demo_tutorial_seeds_example1 > 338/417 Test #342: test_demo_tutorial_seed_and_extend_solution4 > ...................................... Passed 0.08 sec > Start 346: test_demo_tutorial_sequence_io_base > 339/417 Test #343: test_demo_tutorial_seed_and_extend_solution5 > ...................................... Passed 0.08 sec > Start 347: test_demo_tutorial_sequence_io_example1 > 340/417 Test #324: test_demo_tutorial_realignment_step2 > .............................................. Passed 0.66 sec > Start 348: test_demo_tutorial_sequence_io_solution1 > 341/417 Test #344: test_demo_tutorial_seed_and_extend_solution6 > ...................................... Passed 0.10 sec > Start 349: test_demo_tutorial_sequence_io_solution2 > 342/417 Test #345: test_demo_tutorial_seeds_example1 > ................................................. Passed 0.10 sec > Start 350: test_demo_tutorial_sequence_io_solution3 > 343/417 Test #346: test_demo_tutorial_sequence_io_base > ............................................... Passed 0.09 sec > Start 351: test_demo_tutorial_sequence_io_solution4 > 344/417 Test #347: test_demo_tutorial_sequence_io_example1 > ........................................... Passed 0.09 sec > Start 352: test_demo_tutorial_sequences_assignment_1_solution > 345/417 Test #348: test_demo_tutorial_sequence_io_solution1 > .......................................... Passed 0.07 sec > Start 353: test_demo_tutorial_sequences_assignment_2_solution > 346/417 Test #349: test_demo_tutorial_sequence_io_solution2 > .......................................... Passed 0.08 sec > Start 354: test_demo_tutorial_sequences_assignment_3_solution > 347/417 Test #350: test_demo_tutorial_sequence_io_solution3 > .......................................... Passed 0.09 sec > Start 355: test_demo_tutorial_sequences_assignment_4_solution > 348/417 Test #351: test_demo_tutorial_sequence_io_solution4 > .......................................... Passed 0.09 sec > Start 356: test_demo_tutorial_sequences_assignment_5_solution > 349/417 Test #353: test_demo_tutorial_sequences_assignment_2_solution > ................................ Passed 0.05 sec > Start 357: test_demo_tutorial_sequences_assignment_6_solution > 350/417 Test #352: test_demo_tutorial_sequences_assignment_1_solution > ................................ Passed 0.10 sec > Start 358: test_demo_tutorial_sequences_example_comparisons > 351/417 Test #355: test_demo_tutorial_sequences_assignment_4_solution > ................................ Passed 0.08 sec > Start 359: test_demo_tutorial_sequences_example_conversions_copy > 352/417 Test #354: test_demo_tutorial_sequences_assignment_3_solution > ................................ Passed 0.10 sec > Start 360: test_demo_tutorial_sequences_example_conversions_move > 353/417 Test #356: test_demo_tutorial_sequences_assignment_5_solution > ................................ Passed 0.08 sec > Start 361: test_demo_tutorial_sequences_example_functionality1 > 354/417 Test #357: test_demo_tutorial_sequences_assignment_6_solution > ................................ Passed 0.08 sec > Start 362: test_demo_tutorial_sequences_example_functionality2 > 355/417 Test #359: test_demo_tutorial_sequences_example_conversions_copy > ............................. Passed 0.05 sec > Start 363: test_demo_tutorial_sequences_example_segments > 356/417 Test #360: test_demo_tutorial_sequences_example_conversions_move > ............................. Passed 0.07 sec > Start 364: > test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution > 357/417 Test #361: test_demo_tutorial_sequences_example_functionality1 > ............................... Passed 0.07 sec > Start 365: test_demo_tutorial_sequences_in_depth_base > 358/417 Test #362: test_demo_tutorial_sequences_example_functionality2 > ............................... Passed 0.08 sec > Start 366: test_demo_tutorial_sequences_in_depth_example_overflow > 359/417 Test #358: test_demo_tutorial_sequences_example_comparisons > .................................. Passed 0.12 sec > Start 367: test_demo_tutorial_simple_rna_seq_base > 360/417 Test #363: test_demo_tutorial_sequences_example_segments > ..................................... Passed 0.05 sec > Start 368: test_demo_tutorial_simple_rna_seq_genequant_assignment1 > 361/417 Test #365: test_demo_tutorial_sequences_in_depth_base > ........................................ Passed 0.07 sec > Start 369: test_demo_tutorial_simple_rna_seq_genequant_assignment2 > 362/417 Test #366: test_demo_tutorial_sequences_in_depth_example_overflow > ............................ Passed 0.07 sec > Start 370: test_demo_tutorial_simple_rna_seq_genequant_assignment3 > 363/417 Test #367: test_demo_tutorial_simple_rna_seq_base > ............................................ Passed 0.11 sec > Start 371: test_demo_tutorial_simple_rna_seq_genequant_assignment4 > 364/417 Test #368: test_demo_tutorial_simple_rna_seq_genequant_assignment1 > ........................... Passed 0.12 sec > Start 372: test_demo_tutorial_simple_rna_seq_genequant_assignment5 > 365/417 Test #369: test_demo_tutorial_simple_rna_seq_genequant_assignment2 > ........................... Passed 0.10 sec > Start 373: test_demo_tutorial_simple_rna_seq_genequant_solution1 > 366/417 Test #370: test_demo_tutorial_simple_rna_seq_genequant_assignment3 > ........................... Passed 0.11 sec > Start 374: test_demo_tutorial_simple_rna_seq_genequant_solution2 > 367/417 Test #371: test_demo_tutorial_simple_rna_seq_genequant_assignment4 > ........................... Passed 0.14 sec > Start 375: test_demo_tutorial_simple_rna_seq_genequant_solution3 > 368/417 Test #373: test_demo_tutorial_simple_rna_seq_genequant_solution1 > ............................. Passed 0.12 sec > Start 376: test_demo_tutorial_simple_rna_seq_genequant_solution4 > 369/417 Test #374: test_demo_tutorial_simple_rna_seq_genequant_solution2 > ............................. Passed 0.11 sec > Start 377: test_demo_tutorial_simple_rna_seq_genequant_solution5 > 370/417 Test #372: test_demo_tutorial_simple_rna_seq_genequant_assignment5 > ........................... Passed 0.22 sec > Start 378: test_demo_tutorial_simple_rna_seq_interval_tree > 371/417 Test #378: test_demo_tutorial_simple_rna_seq_interval_tree > ................................... Passed 0.07 sec > Start 379: test_demo_tutorial_string_sets_assignment_1_solution > 372/417 Test #377: test_demo_tutorial_simple_rna_seq_genequant_solution5 > ............................. Passed 0.19 sec > Start 380: test_demo_tutorial_string_sets_assignment_2 > 373/417 Test #375: test_demo_tutorial_simple_rna_seq_genequant_solution3 > ............................. Passed 0.24 sec > Start 381: test_demo_tutorial_string_sets_assignment_2_solution > 374/417 Test #376: test_demo_tutorial_simple_rna_seq_genequant_solution4 > ............................. Passed 0.26 sec > Start 382: > test_demo_tutorial_string_sets_assignment_3_workshop_solution > 375/417 Test #379: test_demo_tutorial_string_sets_assignment_1_solution > .............................. Passed 0.13 sec > Start 383: > test_demo_tutorial_string_sets_assignment_4_workshop_solution > 376/417 Test #380: test_demo_tutorial_string_sets_assignment_2 > ....................................... Passed 0.08 sec > Start 384: test_demo_tutorial_string_sets_example_functionality > 377/417 Test #364: > test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution > .......... Passed 0.60 sec > Start 385: test_demo_tutorial_string_sets_example_functionality_2 > 378/417 Test #383: > test_demo_tutorial_string_sets_assignment_4_workshop_solution > ..................... Passed 0.06 sec > Start 386: test_demo_tutorial_string_sets_example_iterators > 379/417 Test #382: > test_demo_tutorial_string_sets_assignment_3_workshop_solution > ..................... Passed 0.07 sec > Start 387: test_demo_tutorial_vcf_io_base > 380/417 Test #381: test_demo_tutorial_string_sets_assignment_2_solution > .............................. Passed 0.17 sec > Start 388: test_demo_tutorial_vcf_io_example1 > 381/417 Test #384: test_demo_tutorial_string_sets_example_functionality > .............................. Passed 0.12 sec > Start 389: test_demo_tutorial_vcf_io_solution1 > 382/417 Test #385: test_demo_tutorial_string_sets_example_functionality_2 > ............................ Passed 0.12 sec > Start 390: test_demo_tutorial_vcf_io_solution2 > 383/417 Test #386: test_demo_tutorial_string_sets_example_iterators > .................................. Passed 0.09 sec > Start 391: test_demo_tutorial_vcf_io_solution3 > 384/417 Test #387: test_demo_tutorial_vcf_io_base > .................................................... Passed 0.13 sec > Start 392: app_test_bs_tools > 385/417 Test #389: test_demo_tutorial_vcf_io_solution1 > ............................................... Passed 0.10 sec > Start 393: app_test_dfi > 386/417 Test #388: test_demo_tutorial_vcf_io_example1 > ................................................ Passed 0.13 sec > Start 394: app_test_fiona > 387/417 Test #391: test_demo_tutorial_vcf_io_solution3 > ............................................... Passed 0.06 sec > Start 395: app_test_gustaf > 388/417 Test #390: test_demo_tutorial_vcf_io_solution2 > ............................................... Passed 0.15 sec > Start 396: app_test_insegt > 389/417 Test #396: app_test_insegt > ................................................................... Passed > 0.14 sec > Start 397: app_test_mason2 > 390/417 Test #395: app_test_gustaf > ................................................................... Passed > 0.49 sec > Start 398: app_test_micro_razers > 391/417 Test #27: test_test_bam_io > .................................................................. Passed > 13.19 sec > Start 399: app_test_ngs_roi > 392/417 Test #399: app_test_ngs_roi > .................................................................. Passed > 0.87 sec > Start 400: app_test_pair_align > 393/417 Test #400: app_test_pair_align > ............................................................... Passed > 1.56 sec > Start 401: test_test_funcs_param_chooser > 394/417 Test #401: test_test_funcs_param_chooser > ..................................................... Passed 0.02 sec > Start 402: app_test_rabema > 395/417 Test #397: app_test_mason2 > ................................................................... Passed > 4.28 sec > Start 403: app_test_razers > 396/417 Test #68: test_test_index_bifm > .............................................................. Passed > 20.76 sec > Start 404: app_test_razers3 > 397/417 Test #404: app_test_razers3 > .................................................................. Passed > 8.70 sec > Start 405: app_test_razers3_sequential > 398/417 Test #405: app_test_razers3_sequential > ....................................................... Passed 10.64 sec > Start 406: app_test_sak > 399/417 Test #406: app_test_sak > ...................................................................... > Passed 0.31 sec > Start 407: app_test_sam2matrix > 400/417 Test #407: app_test_sam2matrix > ............................................................... Passed > 0.13 sec > Start 408: app_test_samcat > 401/417 Test #408: app_test_samcat > ................................................................... Passed > 0.36 sec > Start 409: app_test_searchjoin > 402/417 Test #392: app_test_bs_tools > ................................................................. Passed > 33.26 sec > Start 410: app_test_seqan_tcoffee > 403/417 Test #398: app_test_micro_razers > ............................................................. Passed > 33.13 sec > Start 411: app_test_seqcons2 > 404/417 Test #411: app_test_seqcons2 > ................................................................. Passed > 2.17 sec > Start 412: app_test_sgip > 405/417 Test #410: app_test_seqan_tcoffee > ............................................................ Passed 4.92 > sec > Start 413: app_test_snp_store > 406/417 Test #412: app_test_sgip > ..................................................................... > Passed 3.72 sec > Start 414: app_test_splazers > 407/417 Test #409: app_test_searchjoin > ............................................................... Passed > 23.93 sec > Start 415: app_test_stellar > 408/417 Test #414: app_test_splazers > ................................................................. Passed > 19.37 sec > Start 416: app_test_tree_recon > 409/417 Test #416: app_test_tree_recon > ............................................................... Passed > 0.66 sec > Start 417: app_test_yara > 410/417 Test #403: app_test_razers > ................................................................... Passed > 55.12 sec > 411/417 Test #417: app_test_yara > ..................................................................... > Passed 0.19 sec > 412/417 Test #79: test_journaled_string_tree_find > ................................................... Passed 74.16 sec > 413/417 Test #413: app_test_snp_store > ................................................................ Passed > 26.60 sec > 414/417 Test #402: app_test_rabema > ................................................................... Passed > 66.97 sec > 415/417 Test #415: app_test_stellar > .................................................................. Passed > 23.99 sec > 416/417 Test #393: app_test_dfi > ...................................................................... > Passed 95.44 sec > 417/417 Test #394: app_test_fiona > .................................................................... Passed > 100.60 sec > > 99% tests passed, 1 tests failed out of 417 > > Total Test time (real) = 113.01 sec > > The following tests FAILED: > 278 - test_demo_tutorial_journaled_set_solution_online_search_finder > (Failed) > Errors while running CTest > make[1]: *** [Makefile:112: test] Error 8 > make[1]: Leaving directory > '/<<BUILDDIR>>/seqan2-2.4.0+dfsg/obj-x86_64-linux-gnu' > dh_auto_test: cd obj-x86_64-linux-gnu && make -j8 -Oline test ARGS\+=-j8 > returned exit code 2 The full build log is available from: http://aws-logs.debian.net/2018/05/02/seqan2_2.4.0+dfsg-8_unstable.log A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! About the archive rebuild: The rebuild was done on EC2 VM instances from Amazon Web Services, using a clean, minimal and up-to-date chroot. Every failed build was retried once to eliminate random failures.