Your message dated Thu, 01 Nov 2018 09:19:44 +0000
with message-id <[email protected]>
and subject line Bug#912437: fixed in openmpi 3.1.3-2
has caused the Debian Bug report #912437,
regarding openmpi-bin: Fails to upgrade: update-alternatives: error:
/var/lib/dpkg/alternatives/mpi corrupt: slave link same as main link
/usr/bin/mpicc
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
912437: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912437
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: openmpi-bin
Version: 3.1.3-1
Severity: serious
openmpi-bin fails to upgrade from 3.1.2-6 to 3.1.3-1 as follows for me:
Setting up openmpi-bin (3.1.3-1) ...
update-alternatives: error: /var/lib/dpkg/alternatives/mpi corrupt: slave link
same as main link /usr/bin/mpicc
dpkg: error processing package openmpi-bin (--configure):
installed openmpi-bin package post-installation script subprocess returned
error exit status 2
Errors were encountered while processing:
openmpi-bin
-- System Information:
Debian Release: buster/sid
APT prefers unstable
APT policy: (990, 'unstable'), (600, 'testing'), (500, 'unstable-debug'),
(500, 'buildd-unstable'), (110, 'experimental'), (1, 'experimental-debug'), (1,
'buildd-experimental')
Architecture: amd64 (x86_64)
Kernel: Linux 4.18.0-2-amd64 (SMP w/8 CPU cores)
Locale: LANG=C.UTF-8, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE=C.UTF-8
(charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: sysvinit (via /sbin/init)
LSM: AppArmor: enabled
Versions of packages openmpi-bin depends on:
ii libc6 2.27-8
ii libevent-2.1-6 2.1.8-stable-4
ii libevent-pthreads-2.1-6 2.1.8-stable-4
ii libhwloc5 1.11.11-2
ii libopenmpi3 3.1.3-1
ii openmpi-common 3.1.3-1
ii openssh-client [ssh-client] 1:7.9p1-1
ii zlib1g 1:1.2.11.dfsg-1
Versions of packages openmpi-bin recommends:
pn libopenmpi-dev <none>
Versions of packages openmpi-bin suggests:
ii gfortran 4:8.2.0-2
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: openmpi
Source-Version: 3.1.3-2
We believe that the bug you reported is fixed in the latest version of
openmpi, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <[email protected]> (supplier of updated openmpi package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 31 Oct 2018 17:12:52 +0000
Source: openmpi
Binary: openmpi-bin libopenmpi-dev libopenmpi3 openmpi-common openmpi-doc
Architecture: source amd64 all
Version: 3.1.3-2
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <[email protected]>
Changed-By: Alastair McKinstry <[email protected]>
Description:
libopenmpi-dev - high performance message passing library -- header files
libopenmpi3 - high performance message passing library -- shared library
openmpi-bin - high performance message passing library -- binaries
openmpi-common - high performance message passing library -- common files
openmpi-doc - high performance message passing library -- man pages
Closes: 912437
Changes:
openmpi (3.1.3-2) unstable; urgency=medium
.
* Check if mpi alternatives is corrupt. If so, delete. Closes: #912437
* openmpi-dev.postinst: don't call update-alt on abort
* openmpi-bin.postinst: silence grep output on check
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