Hi Aaron,
I've checked ncbi-blast+ and your last upload does not seem to be
pushed.
Since there is a strong relation in time with your upload and this
FTBFS of biopython do you think that this could be connected:
On Sun, May 03, 2020 at 02:43:59PM +0200, Lucas Nussbaum wrote:
> > ======================================================================
> > FAIL: test_fasta_db_nucl (test_NCBI_BLAST_tools.BlastDB)
> > Test makeblastdb wrapper with nucleotide database.
> > ----------------------------------------------------------------------
> > Traceback (most recent call last):
> > File
> > "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/Tests/test_NCBI_BLAST_tools.py",
> > line 248, in test_fasta_db_nucl
> > self.assertTrue(os.path.isfile("GenBank/NC_005816.fna.nsd"))
> > AssertionError: False is not true
> >
> > ======================================================================
> > FAIL: test_fasta_db_prot (test_NCBI_BLAST_tools.BlastDB)
> > Test makeblastdb wrapper with protein database.
> > ----------------------------------------------------------------------
> > Traceback (most recent call last):
> > File
> > "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.8/build/Tests/test_NCBI_BLAST_tools.py",
> > line 213, in test_fasta_db_prot
> > self.assertTrue(os.path.isfile("GenBank/NC_005816.faa.psd"))
> > AssertionError: False is not true
> >
> > ----------------------------------------------------------------------
> > Ran 519 tests in 222.972 seconds
> >
> > FAILED (failures = 1)
Kind regards
Andreas.
--
http://fam-tille.de
