Hi Pranav, since you dealt with tests in this package could you please have a look?
Kind regards Andreas. On Sat, May 16, 2020 at 02:50:12PM +0300, Adrian Bunk wrote: > Source: tree-puzzle > Version: 5.3~rc16+dfsg-1 > Severity: serious > Tags: ftbfs > > Based on the "Important remark" below, test failures shouldn't be fatal. > This would also make them not suitable for autopkgtest. > > > https://buildd.debian.org/status/package.php?p=tree-puzzle&suite=sid > > ... > FAIL: qp-hky-rhet-nucl > ====================== > > > Testing: nucleotide data, HKY, rate heterogeneity, quartet puzzling > (qp-hky-rhet-nucl) > 327c327 > < Dasyurus 3 0.00001 0.00268 11 0.07879 0.07178 > --- > > Dasyurus 3 0.00001 0.00141 11 0.07879 0.07178 > FAIL qp-hky-rhet-nucl.test (exit status: 1) > > FAIL: qp-hky-rhet-clock-nucl > ============================ > > > Testing: nucleotide data, HKY, clock, rate heterogeneity, quartet puzzling > (qp-hky-rhet-clock-nucl) > 327c327 > < Dasyurus 3 0.00001 0.00268 11 0.07879 0.07178 > --- > > Dasyurus 3 0.00001 0.00141 11 0.07879 0.07178 > FAIL qp-hky-rhet-clock-nucl.test (exit status: 1) > > FAIL: qp-jtt-rhet-prot > ====================== > > > Testing: protein data, JTT, rate heterogeneity, quartet puzzling > (qp-jtt-rhet-prot) > 295c295 > < HBA_HUMAN 3 0.01975 0.02293 10 0.74671 0.14184 > --- > > HBA_HUMAN 3 0.01975 0.02294 10 0.74671 0.14184 > FAIL qp-jtt-rhet-prot.test (exit status: 1) > > FAIL: qp-jtt-rhet-clock-prot > ============================ > > > Testing: protein data, JTT, clock, rate heterogeneity, quartet puzzling > (qp-jtt-rhet-clock-prot) > 295c295 > < HBA_HUMAN 3 0.01975 0.02293 10 0.74671 0.14184 > --- > > HBA_HUMAN 3 0.01975 0.02294 10 0.74671 0.14184 > FAIL qp-jtt-rhet-clock-prot.test (exit status: 1) > > FAIL: ut-pure-prot > ================== > > > Testing: protein data, default model, user tree evaluation (ut-pure-prot) > 178c178 > < HBB_HORSE 2 0.12686 0.03876 9 0.00001 0.00105 > --- > > HBB_HORSE 2 0.12686 0.03876 9 0.00001 0.00100 > 218c218 > < HBB_HUMAN 1 0.04915 0.03158 8 0.28347 0.08777 > --- > > HBB_HUMAN 1 0.04915 0.03158 8 0.28347 0.08778 > 258c258 > < HBB_HORSE 2 0.12653 0.03874 9 0.12334 0.15663 > --- > > HBB_HORSE 2 0.12653 0.03874 9 0.12334 0.15661 > FAIL ut-pure-prot.test (exit status: 1) > > FAIL: cons-pure-prot > ==================== > > > Testing: protein data, default model, consensus construction (cons-pure-prot) > 230c230 > < HBB_HUMAN 1 0.04834 0.03148 8 0.28040 0.08745 > --- > > HBB_HUMAN 1 0.04834 0.03148 8 0.28040 0.08746 > FAIL cons-pure-prot.test (exit status: 1) > > SKIP: build-remark > ================== > > > *** > *** !!! Important remark !!! > *** > *** Please note that only the output file *.puzzle is checked > *** for identity. The overall precision reached in the program > *** is heavily dependent on the compiler as well as the optimization > *** level (-O) used to compile the executable. > *** Hence, even if tests are marked as failed this might just be > *** due to differences in less significant digits caused by rounding > *** errors from less acurate computations for the sake of faster > *** running times. (If you want to be sure about this please refer > *** to your compiler's manual!) > *** > *** Please check the output file differences which are printed during the > tests. > *** The template files which the results are checked against have been > *** generated with TREE-PUZZLE 5.2 compiled with GCC version 3.3-20030226 > *** and default compiler flags '-g -O2' and using the SPRNG random number > *** generator. > *** > > SKIP build-remark (exit status: 77) > > ============================================================================ > Testsuite summary for tree-puzzle 5.3.rc16 > ============================================================================ > # TOTAL: 19 > # PASS: 11 > # SKIP: 2 > # XFAIL: 0 > # FAIL: 6 > # XPASS: 0 > # ERROR: 0 > ============================================================================ > See tests/test-suite.log > ============================================================================ > make[5]: *** [Makefile:563: test-suite.log] Error 1 > make[5]: Leaving directory '/<<PKGBUILDDIR>>/tests' > > _______________________________________________ > Debian-med-packaging mailing list > debian-med-packag...@alioth-lists.debian.net > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging -- http://fam-tille.de