Package: src:kissplice Version: 2.5.3-2 Severity: serious Tags: sid bullseye User: debian-pyt...@lists.debian.org Usertags: python3.9
Not sure if that's python 3.9 specific (python3-defaults from experimental was used). this ends up with a link error: https://people.debian.org/~ginggs/python3.9-default/kissplice_2.5.3-2build1_amd64-2020-10-21T09:34:38Z.build usr/bin/ld: CMakeFiles/ks_kissreadsSplice.dir/tree.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:56: multiple definition of `quality'; CMakeFiles/ks_kissreadsSplice.dir/commons.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:56: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSplice.dir/tree.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:55: multiple definition of `silent'; CMakeFiles/ks_kissreadsSplice.dir/commons.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:55: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSplice.dir/tree.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:54: multiple definition of `standard_fasta'; CMakeFiles/ks_kissreadsSplice.dir/commons.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:54: first defined here /usr/bin/ld: CMakeFiles/ks_kissreadsSplice.dir/tree.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:53: multiple definition of `nuc'; CMakeFiles/ks_kissreadsSplice.dir/commons.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:53: first defined here /usr/bin/ldcd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/modules && /usr/bin/c++ -I/<<PKGBUILDDIR>>/modules -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -Wno-parentheses -Wno-error=format-security -std=c++11 -o CMakeFiles/ks_clean_duplicates.dir/LabelledCEdge.cpp.o -c /<<PKGBUILDDIR>>/modules/LabelledCEdge.cpp : CMakeFiles/ks_kissreadsSplice.dir/tree.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:52: multiple definition of `comp'; CMakeFiles/ks_kissreadsSplice.dir/commons.c.o:./obj-x86_64-linux-gnu/thirdparty/kissreads/src/./thirdparty/kissreads/include/commons.h:52: first defined here collect2: error: ld returned 1 exit status make[3]: *** [thirdparty/kissreads/src/CMakeFiles/ks_kissreadsSplice.dir/build.make:257: lib/kissplice/ks_kissreadsSplice] Error 1 make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-x86_64-linux-gnu'