Source: python-anndata
Version: 0.7.5+ds-2
Severity: serious
https://tracker.debian.org/pkg/python-anndata
Migration status for python-anndata (- to 0.7.5+ds-2): BLOCKED:
Rejected/violates migration policy/introduces a regression
Issues preventing migration:
autopkgtest for python-anndata/0.7.5+ds-2: amd64: Pass, arm64: Pass, armhf:
Regression ♻ , i386: Regression ♻ , ppc64el: Pass
...
=================================== FAILURES ===================================
___________________ test_set_dataframe[<lambda>-False-int32] ___________________
homogenous = False, df = <function <lambda> at 0xf1d74148>
dtype = <class 'numpy.int32'>
@pytest.mark.parametrize(
"df,homogenous,dtype",
[
(lambda: gen_typed_df_t2_size(*X.shape), True, np.object_),
(lambda: pd.DataFrame(X ** 2), False, np.int_),
],
)
def test_set_dataframe(homogenous, df, dtype):
adata = AnnData(X)
if homogenous:
with pytest.warns(UserWarning, match=r"Layer 'df'.*dtype object"):
adata.layers["df"] = df()
else:
with pytest.warns(None) as warnings:
adata.layers["df"] = df()
assert not len(warnings)
assert isinstance(adata.layers["df"], np.ndarray)
> assert np.issubdtype(adata.layers["df"].dtype, dtype)
E AssertionError: assert False
E + where False = <function issubdtype at 0xf60991d8>(dtype('int32'),
<class 'numpy.int32'>)
E + where <function issubdtype at 0xf60991d8> = np.issubdtype
E + and dtype('int32') = array([[ 1, 4, 9],\n [16, 25,
36],\n [49, 64, 81]], dtype=int32).dtype
/usr/lib/python3/dist-packages/anndata/tests/test_layers.py:62: AssertionError
...
Removing this assert in line 62 fixes the build on i386 for me,
which might be the way forward for getting the package into bullseye.
