Source: python-biopython
Version: 1.79+dfsg-1
Severity: serious
Justification: FTBFS
Control: block -1 with 1000358
python-biopython FTBFS with tests failing like so:
======================================================================
FAIL: test_tblastx (test_NCBI_BLAST_tools.CheckCompleteArgList)
Check all tblastx arguments are supported.
----------------------------------------------------------------------
Traceback (most recent call last):
File
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/Tests/test_NCBI_BLAST_tools.py",
line 424, in test_tblastx
self.check("tblastx", Applications.NcbitblastxCommandline)
File
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build/Tests/test_NCBI_BLAST_tools.py",
line 388, in check
self.assertEqual(stderrdata, "", "%s\n%s" % (cline, stderrdata))
AssertionError: 'Critical: External MBEDTLS version mismat[36 chars]me\n' != ''
- Critical: External MBEDTLS version mismatch: 2.16.9 headers vs. 2.16.11
runtime
: /usr/bin/tblastx -h
Critical: External MBEDTLS version mismatch: 2.16.9 headers vs. 2.16.11 runtime
----------------------------------------------------------------------
See:
https://buildd.debian.org/status/fetch.php?pkg=python-biopython&arch=amd64&ver=1.79%2Bdfsg-1%2Bb1&stamp=1637490185&raw=0
Looks like ncbi-blast+ needs to be rebuilt.
SR
