Your message dated Tue, 16 Aug 2022 05:19:27 +0000 with message-id <e1onoz9-002bru...@fasolo.debian.org> and subject line Bug#1012969: fixed in libbpp-popgen 2.4.1-7 has caused the Debian Bug report #1012969, regarding libbpp-popgen: ftbfs with GCC-12 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1012969: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1012969 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Package: src:libbpp-popgen Version: 2.4.1-6 Severity: normal Tags: sid bookworm User: debian-...@lists.debian.org Usertags: ftbfs-gcc-12 [This bug is targeted to the upcoming bookworm release] Please keep this issue open in the bug tracker for the package it was filed for. If a fix in another package is required, please file a bug for the other package (or clone), and add a block in this package. Please keep the issue open until the package can be built in a follow-up test rebuild. The package fails to build in a test rebuild on at least amd64 with gcc-12/g++-12, but succeeds to build with gcc-11/g++-11. The severity of this report will be raised before the bookworm release. The full build log can be found at: http://qa-logs.debian.net/2022/06/09/gcc12/libbpp-popgen_2.4.1-6_unstable_gcc12.log The last lines of the build log are at the end of this report. To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly, or install the gcc, g++, gfortran, ... packages from experimental. apt-get -t=experimental install g++ Common build failures are new warnings resulting in build failures with -Werror turned on, or new/dropped symbols in Debian symbols files. For other C/C++ related build failures see the porting guide at http://gcc.gnu.org/gcc-11/porting_to.html GCC 11 defaults to the GNU++17 standard. If your package installs header files in /usr/include, please don't work around C++17 issues by choosing a lower C++ standard for the package build, but fix these issues to build with the C++17 standard. 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_ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_PKS5_@Base 2.4.1 +#MISSING: 2.4.1-6# _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_PKS5_@Base 2.4.1 + _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEOS8_S9_@Base 2.4.1-6 _ZStplIcSt11char_traitsIcESaIcEENSt7__cxx1112basic_stringIT_T0_T1_EEPKS5_RKS8_@Base 2.4.1 _ZTIN3bpp10AlleleInfoE@Base 2.4.1 _ZTIN3bpp10IndividualE@Base 2.4.1 @@ -1285,6 +1301,7 @@ _ZTv0_n24_N3bpp11PopgenlibIOD0Ev@Base 2.4.1 _ZTv0_n24_N3bpp11PopgenlibIOD1Ev@Base 2.4.1 _ZTv0_n24_N3bpp13BasicSequenceD0Ev@Base 2.4.1 + _ZTv0_n24_N3bpp13BasicSequenceD1Ev@Base 2.4.1-6 _ZTv0_n24_N3bpp14DistanceMatrixD0Ev@Base 2.4.1 _ZTv0_n24_N3bpp14DistanceMatrixD1Ev@Base 2.4.1 _ZTv0_n24_N3bpp15BasicAlleleInfoD0Ev@Base 2.4.1 dh_makeshlibs: error: failing due to earlier errors make: *** [debian/rules:8: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
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--- Begin Message ---Source: libbpp-popgen Source-Version: 2.4.1-7 Done: Andreas Tille <ti...@debian.org> We believe that the bug you reported is fixed in the latest version of libbpp-popgen, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1012...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated libbpp-popgen package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 16 Aug 2022 07:01:14 +0200 Source: libbpp-popgen Architecture: source Version: 2.4.1-7 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Closes: 1012969 Changes: libbpp-popgen (2.4.1-7) unstable; urgency=medium . [ Étienne Mollier ] * Team upload. * d/libbpp-popgen8.symbols.amd64: mark compiler specific symbols optional. (Closes: #1012969) . [ Andreas Tille ] * Standards-Version: 4.6.1 (routine-update) Checksums-Sha1: eec1405c84167c5c27bb30854a8e94ba98d4cca3 2178 libbpp-popgen_2.4.1-7.dsc 5841a6f9f90a9adf21856606efbba0e694f813d7 19084 libbpp-popgen_2.4.1-7.debian.tar.xz 43bbcaeb6f8b7d17b83df2e50847aeaa6d9527b2 7754 libbpp-popgen_2.4.1-7_amd64.buildinfo Checksums-Sha256: f229ed822cc4b85a5b85bdf51b041d4bb5db7ca16a6d764495a2311ed057c4f5 2178 libbpp-popgen_2.4.1-7.dsc 990848dfdae8c6b61102f6ce638fe085ffa76e7e8946c5452e841b8644ebe011 19084 libbpp-popgen_2.4.1-7.debian.tar.xz 86e11907ac3df3fdef3527dff9650338fcc1ef9bdfd3b0f2afd5840ac019a0c7 7754 libbpp-popgen_2.4.1-7_amd64.buildinfo Files: b9985c3e1f7b2974d14a2d03a150e3d1 2178 science optional libbpp-popgen_2.4.1-7.dsc b294025c913eaadef4adba07136b4236 19084 science optional libbpp-popgen_2.4.1-7.debian.tar.xz a6746271c526800366661b65544f41b3 7754 science optional libbpp-popgen_2.4.1-7_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmL7JQ4RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtG5ZA/+OvtEeqcEYo/NGtjsmGMZKaW5Fu+fkNYl +JiuOwArChqQDO9dlTi1Cq0NVyZKmvwrodU8mIhVkhs/kCE6Yx0TOQxMAkkK+kbD AXFwFW8iYbejUw1G/HuH6HVqhhkxv8kcLNOlQBwl8dgNUTw4WWc7wbvQ5G/A487F AwHLftRZbhjwJHsicrIDIdUzF7uaYbQJJhMs1Q1uyWuBKlp4ticltKT0+kYx77L1 PnT9isYcHfFbJPqEP0tC/Sdoh7rkS+VQhrTELDlJUyRbebpMxRmR7OYOpFNba0bt w2RxrQhdqV/U0xPZs1E2VcfVRTm5lFtEiDN3oQNywnmj/py0ZnSUwmq7E9Y91Ygd ubgvAOGh7JzicQDXurvZ+18dLGo/PoMv9Ip6JTPikuATJJwcVx3UDvI3hRlZzZSX FOekQCnZTvRbnDnl+PZ+CdWeXIzSKkS9PruL89oR+RnVW4LWqcFFJbJXPXerYvjM EwSs5c9qC7LV/duy+3+Sfh2x7Uv4d4meosfDAettCD3Hg9/NnWdqutvzD7vtB6vN sHGdn9YC09ti9RXiP8O8sKJfn8c5VOjYPBBhkz5Vs2Nd6n0QmSK0gVI42YunljJQ ydwAKEDuKNDI0idB7U/9cFwXVtIGOBo54L9jWPMbJ7HoCNj/oR2GYA5scdPeFz/V OpU9jtOxGAE= =3uTW -----END PGP SIGNATURE-----
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