Your message dated Sun, 04 Sep 2022 06:53:02 +0000 with message-id <e1oujv8-00272u...@fasolo.debian.org> and subject line Bug#1013415: fixed in r-cran-rstantools 2.2.0-2 has caused the Debian Bug report #1013415, regarding r-cran-rstantools: r-cran-rstan needs recompilation autopkgtest regression with r-cran-rcppparallel to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1013415: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1013415 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: r-cran-rstantools Version: 2.2.0-1 Severity: serious Hi Maintainer Since the upload of r-cran-rcppparallel 5.1.5+dfsg-2, the autopkgtests of r-cran-rstantools have been failing [1]. I've copied what I hope is the relevant part of the log below. Regards Graham [1] https://ci.debian.net/packages/r/r-cran-rstantools/testing/amd64/ == Failed tests ================================================================ -- Error (test-rstan_config.R:62:1): (code run outside of `test_that()`) ------- Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/usr/lib/R/site-library/rstan/libs/rstan.so': /usr/lib/R/site-library/rstan/libs/rstan.so: undefined symbol: _ZN3tbb8internal26task_scheduler_observer_v37observeEb Backtrace: x 1. +-rstantools::rstan_config(pkg_dest_path) at test-rstan_config.R:62:0 2. | \-base::sapply(stan_files, .make_cc, pkgdir = pkgdir) 3. | \-base::lapply(X = X, FUN = FUN, ...) 4. | \-rstantools FUN(X[[i]], ...) 5. \-base::loadNamespace(x) 6. \-base::library.dynam(lib, package, package.lib) 7. \-base::dyn.load(file, DLLpath = DLLpath, ...) -- Error (test-rstan_create_package.R:89:3): (code run outside of `test_that()`) -- Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/usr/lib/R/site-library/rstan/libs/rstan.so': /usr/lib/R/site-library/rstan/libs/rstan.so: undefined symbol: _ZN3tbb8internal26task_scheduler_observer_v37observeEb Backtrace: x 1. +-rstantools::rstan_config(pkg_dest_path) at test-rstan_create_package.R:89:2 2. | \-base::sapply(stan_files, .make_cc, pkgdir = pkgdir) 3. | \-base::lapply(X = X, FUN = FUN, ...) 4. | \-rstantools FUN(X[[i]], ...) 5. \-base::loadNamespace(x) 6. \-base::library.dynam(lib, package, package.lib) 7. \-base::dyn.load(file, DLLpath = DLLpath, ...) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 41 ] Error: Test failures Execution halted
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--- Begin Message ---Source: r-cran-rstantools Source-Version: 2.2.0-2 Done: Nilesh Patra <nil...@debian.org> We believe that the bug you reported is fixed in the latest version of r-cran-rstantools, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1013...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Nilesh Patra <nil...@debian.org> (supplier of updated r-cran-rstantools package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sun, 04 Sep 2022 11:38:05 +0530 Source: r-cran-rstantools Architecture: source Version: 2.2.0-2 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net> Changed-By: Nilesh Patra <nil...@debian.org> Closes: 1013415 Changes: r-cran-rstantools (2.2.0-2) unstable; urgency=medium . * Team Upload. * Add d/s/lintian-overrides for FP * Version B-D on cppparallel and test dep against rstan to rebuild against recompiled packages against onetbb Closes: #1013415 Checksums-Sha1: 52af754a796609cecf297cc10c25d5419deef5d6 2244 r-cran-rstantools_2.2.0-2.dsc 9c829bfb13206a7422fb5d5583aad4091da72e2a 2732 r-cran-rstantools_2.2.0-2.debian.tar.xz 77281344592c65b2c7b8641f8e27fff2ea69e373 11152 r-cran-rstantools_2.2.0-2_amd64.buildinfo Checksums-Sha256: da0b68a0d3849b7525252769ec5244efdf66737718919a06a8bbe31a9e792247 2244 r-cran-rstantools_2.2.0-2.dsc f33550a804fd3d37a019cbdb0a620430d733afc6f6db24cd27ab6fdbe99f727d 2732 r-cran-rstantools_2.2.0-2.debian.tar.xz 3ea9fb42bfe0c299cbaae3d543f30f2184fa860e7b8fbc67f5692782d0fc006b 11152 r-cran-rstantools_2.2.0-2_amd64.buildinfo Files: f3c6835bf305816bae478d1d666b1fd5 2244 gnu-r optional r-cran-rstantools_2.2.0-2.dsc 638f1cd2748151d2f8c018d220e8d663 2732 gnu-r optional r-cran-rstantools_2.2.0-2.debian.tar.xz b2f8389aa509c1bc4bd0959bc7246845 11152 gnu-r optional r-cran-rstantools_2.2.0-2_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmMURSoSHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nxGTMP/0YDdfwi+kJr3vcJWJtPam33HlzggMCI ACkM06TGPZQ0heJf0Y95rsKNdMIf+jdmMl4LLf1f4wxw9R8QRwx2toPt68D0KTZu Mhfe3JTRE/Q72PVQjjy+Ua5ux5kaXbcPrwSelpacYJJzFDZs+TpXw+XVVn/3LYc4 Nd11RR6fxvkZUifKGh0AxRZSlUag/UQDO98IF3Ls5u/Ya2/4uka9SsTF4Kme6Kou rpLIR1wGDYyOuqe1F1+Rw1UsoecLdd2S3xMNhejjtpRH+Nw+pbGfgToo1a2VlV1b qibY0TY9THThKsPJY1LFdHvkF+68Yic+YB1hgAeANXVgTMS2aY+JCVsw6Ec8B8I0 9iKC3cC04SrTNJtgJBB5QAb+9Ts+t00dn4EvQS4tfZeKTvX/lvuZgnU84zInJJD6 /DSsVu5ssF5VmcjbJjrzstvEaznGc9U3EIIe1rPSa8vyZlGomp3gcAHjcmKxeAM8 ZOehcOk11vDlSbSLRX3rd2a7aMmI6FJiyAnPw5PQUtIIAWUKtXRxtEtL4DhBYStV v+zlEX6zZceX5JfmvoRbN958GS66Vo83INEcxQ+JruZZzzbEM0kxIwJ6SwVEAUFF RsaDREZPC84ffCh5UqldafDfQveGrxvWZDBuemZZ213OYUCdWfrqUw+Ywu8oeOXf G+CvuF489s2Z =IOzG -----END PGP SIGNATURE-----
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