Your message dated Mon, 05 Sep 2022 14:43:51 +0000
with message-id <e1ovdkj-009dme...@fasolo.debian.org>
and subject line Bug#1015136: fixed in q2cli 2022.8.0-1
has caused the Debian Bug report #1015136,
regarding q2cli: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i
python{version} -p 3.10 returned exit code 13
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1015136: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1015136
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: q2cli
Version: 2021.8.0-2
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20220716 ftbfs-bookworm
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> debian/rules binary
> dh binary --with python3 --buildsystem=pybuild
> dh_update_autotools_config -O--buildsystem=pybuild
> dh_autoreconf -O--buildsystem=pybuild
> dh_auto_configure -O--buildsystem=pybuild
> I: pybuild base:239: python3.10 setup.py config
> running config
> dh_auto_build -O--buildsystem=pybuild
> I: pybuild base:239: /usr/bin/python3 setup.py build
> running build
> running build_py
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> copying q2cli/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> copying q2cli/util.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> copying q2cli/__main__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> copying q2cli/commands.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> copying q2cli/_version.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/builtin
> copying q2cli/builtin/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/builtin
> copying q2cli/builtin/tools.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/builtin
> copying q2cli/builtin/dev.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/builtin
> copying q2cli/builtin/info.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/builtin
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> copying q2cli/click/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> copying q2cli/click/parser.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> copying q2cli/click/option.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> copying q2cli/click/type.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> copying q2cli/click/command.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/click
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/test_cli.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/test_dev.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/test_usage.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/test_core.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> copying q2cli/tests/test_tools.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/tests
> creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> copying q2cli/core/__init__.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> copying q2cli/core/usage.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> copying q2cli/core/cache.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> copying q2cli/core/config.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> copying q2cli/core/completion.py ->
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/core
> running egg_info
> creating q2cli.egg-info
> writing q2cli.egg-info/PKG-INFO
> writing dependency_links to q2cli.egg-info/dependency_links.txt
> writing entry points to q2cli.egg-info/entry_points.txt
> writing top-level names to q2cli.egg-info/top_level.txt
> writing manifest file 'q2cli.egg-info/SOURCES.txt'
> reading manifest file 'q2cli.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> adding license file 'LICENSE'
> writing manifest file 'q2cli.egg-info/SOURCES.txt'
> UPDATING /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/_version.py
> set /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build/q2cli/_version.py to
> '2021.8.0'
> running build_scripts
> creating build
> creating build/scripts-3.10
> copying bin/tab-qiime -> build/scripts-3.10
> changing mode of build/scripts-3.10/tab-qiime from 644 to 755
> dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:239: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build;
> python3.10 -m pytest
> ============================= test session starts
> ==============================
> platform linux -- Python 3.10.5, pytest-7.1.2, pluggy-1.0.0
> rootdir: /<<PKGBUILDDIR>>
> collected 119 items
>
> q2cli/tests/test_cli.py ........................................... [
> 36%]
> q2cli/tests/test_core.py ............ [
> 46%]
> q2cli/tests/test_dev.py .... [
> 49%]
> q2cli/tests/test_tools.py .............................................. [
> 88%]
> ........ [
> 94%]
> q2cli/tests/test_usage.py FFFFFF
> [100%]
>
> =================================== FAILURES
> ===================================
> _ test_examples[concatenate_ints-# ### example: concatenate ints simple
> ###\n# This example demonstrates basic usage.\nqiime dummy-plugin
> concatenate-ints \\\n --i-ints1 ints_a.qza \\\n --i-ints2 ints_b.qza
> \\\n --i-ints3 ints_c.qza \\\n --p-int1 4 \\\n --p-int2 2 \\\n
> --o-concatenated-ints ints_d.qza\n# ### example: concatenate ints complex
> ###\n# This example demonstrates chained usage (pt 1).\nqiime dummy-plugin
> concatenate-ints \\\n --i-ints1 ints_a.qza \\\n --i-ints2 ints_b.qza
> \\\n --i-ints3 ints_c.qza \\\n --p-int1 4 \\\n --p-int2 2 \\\n
> --o-concatenated-ints ints_d.qza\n# This example demonstrates chained usage
> (pt 2).\nqiime dummy-plugin concatenate-ints \\\n --i-ints1 ints_d.qza
> \\\n --i-ints2 ints_b.qza \\\n --i-ints3 ints_c.qza \\\n --p-int1 41
> \\\n --p-int2 0 \\\n --o-concatenated-ints concatenated_ints.qza\n# ###
> example: comments only ###\n# comment 1\n# comment 2\n# ### example: comments
> only factory ###\n# comment 1\n# comment 2] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <method qiime2.plugins.dummy_plugin.methods.concatenate_ints>
> exp = '# ### example: concatenate ints simple ###\n# This example
> demonstrates basic usage.\nqiime dummy-plugin concatenate-...ample: comments
> only ###\n# comment 1\n# comment 2\n# ### example: comments only factory
> ###\n# comment 1\n# comment 2'
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...\n# comment 2' == '# ###
> exampl...y factory ###'
> E Skipping 35 identical leading characters in diff, use -v to show
> E ple ###
> E + # This example demonstrates basic usage.
> E + qiime dummy-plugin concatenate-ints \
> E + --i-ints1 ints_a.qza \
> E + --i-ints2 ints_b.qza \
> E + --i-ints3 ints_c.qza \...
> E
> E ...Full output truncated (29 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> _ test_examples[identity_with_metadata-# ### example: identity with metadata
> simple ###\nqiime dummy-plugin identity-with-metadata \\\n --i-ints
> ints.qza \\\n --m-metadata-file md.tsv \\\n --o-out out.qza\n# ###
> example: identity with metadata merging ###\nqiime dummy-plugin
> identity-with-metadata \\\n --i-ints ints.qza \\\n --m-metadata-file
> md1.tsv \\\n --m-metadata-file md2.tsv \\\n --o-out out.qza] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <method qiime2.plugins.dummy_plugin.methods.identity_with_metadata>
> exp = '# ### example: identity with metadata simple ###\nqiime dummy-plugin
> identity-with-metadata \\\n --i-ints ints.qza... \\\n --i-ints ints.qza
> \\\n --m-metadata-file md1.tsv \\\n --m-metadata-file md2.tsv \\\n
> --o-out out.qza'
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...o-out out.qza' == '# ###
> exampl...a merging ###'
> E Skipping 39 identical leading characters in diff, use -v to show
> E imple ###
> E + qiime dummy-plugin identity-with-metadata \
> E + --i-ints ints.qza \
> E + --m-metadata-file md.tsv \
> E + --o-out out.qza
> E - # ### example: identity with metadata merging ###...
> E
> E ...Full output truncated (8 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> _ test_examples[identity_with_metadata_column-# ### example: identity with
> metadata column get mdc ###\nqiime dummy-plugin identity-with-metadata-column
> \\\n --i-ints ints.qza \\\n --m-metadata-file md.tsv \\\n
> --m-metadata-column 'a' \\\n --o-out out.qza] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <method
> qiime2.plugins.dummy_plugin.methods.identity_with_metadata_column>
> exp = "# ### example: identity with metadata column get mdc ###\nqiime
> dummy-plugin identity-with-metadata-column \\\n --i-ints ints.qza \\\n
> --m-metadata-file md.tsv \\\n --m-metadata-column 'a' \\\n --o-out
> out.qza"
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...o-out out.qza' == '# ###
> exampl...n get mdc ###'
> E Skipping 45 identical leading characters in diff, use -v to show
> E - get mdc ###
> E + get mdc ###
> E ? +
> E + qiime dummy-plugin identity-with-metadata-column \
> E + --i-ints ints.qza \
> E + --m-metadata-file md.tsv \...
> E
> E ...Full output truncated (3 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> _ test_examples[typical_pipeline-# ### example: typical pipeline simple
> ###\nqiime dummy-plugin typical-pipeline \\\n --i-int-sequence ints.qza
> \\\n --i-mapping mapper.qza \\\n --p-do-extra-thing True \\\n
> --o-out-map out_map.qza \\\n --o-left left.qza \\\n --o-right right.qza
> \\\n --o-left-viz left_viz.qzv \\\n --o-right-viz right_viz.qzv\n# ###
> example: typical pipeline complex ###\nqiime dummy-plugin typical-pipeline
> \\\n --i-int-sequence ints1.qza \\\n --i-mapping mapper1.qza \\\n
> --p-do-extra-thing True \\\n --o-out-map out_map1.qza \\\n --o-left
> left1.qza \\\n --o-right right1.qza \\\n --o-left-viz left_viz1.qzv
> \\\n --o-right-viz right_viz1.qzv\nqiime dummy-plugin typical-pipeline
> \\\n --i-int-sequence left1.qza \\\n --i-mapping out_map1.qza \\\n
> --p-do-extra-thing False \\\n --o-out-map out_map2.qza \\\n --o-left
> left2.qza \\\n --o-right right2.qza \\\n --o-left-viz left_viz2.qzv
> \\\n --o-right-viz right_viz2.qzv] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <pipeline qiime2.plugins.dummy_plugin.pipelines.typical_pipeline>
> exp = '# ### example: typical pipeline simple ###\nqiime dummy-plugin
> typical-pipeline \\\n --i-int-sequence ints.qza \\\...-o-left left2.qza
> \\\n --o-right right2.qza \\\n --o-left-viz left_viz2.qzv \\\n
> --o-right-viz right_viz2.qzv'
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...ight_viz2.qzv' == '# ###
> exampl...e complex ###'
> E Skipping 33 identical leading characters in diff, use -v to show
> E imple ###
> E + qiime dummy-plugin typical-pipeline \
> E + --i-int-sequence ints.qza \
> E + --i-mapping mapper.qza \
> E + --p-do-extra-thing True \
> E + --o-out-map out_map.qza \...
> E
> E ...Full output truncated (26 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> _ test_examples[optional_artifacts_method-# ### example: optional inputs
> ###\nqiime dummy-plugin optional-artifacts-method \\\n --i-ints ints.qza
> \\\n --p-num1 1 \\\n --o-output output.qza\nqiime dummy-plugin
> optional-artifacts-method \\\n --i-ints ints.qza \\\n --p-num1 1 \\\n
> --p-num2 2 \\\n --o-output output.qza\nqiime dummy-plugin
> optional-artifacts-method \\\n --i-ints ints.qza \\\n --p-num1 1 \\\n
> --p-num2 None \\\n --o-output ints_b.qza\nqiime dummy-plugin
> optional-artifacts-method \\\n --i-ints ints.qza \\\n --i-optional1
> ints_b.qza \\\n --p-num1 3 \\\n --p-num2 4 \\\n --o-output
> output.qza] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <method
> qiime2.plugins.dummy_plugin.methods.optional_artifacts_method>
> exp = '# ### example: optional inputs ###\nqiime dummy-plugin
> optional-artifacts-method \\\n --i-ints ints.qza \\\n --...--i-ints
> ints.qza \\\n --i-optional1 ints_b.qza \\\n --p-num1 3 \\\n --p-num2
> 4 \\\n --o-output output.qza'
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...ut output.qza' == '# ###
> exampl...al inputs ###'
> E - # ### example: optional inputs ###
> E + # ### example: optional inputs ###
> E ? +
> E + qiime dummy-plugin optional-artifacts-method \
> E + --i-ints ints.qza \
> E + --p-num1 1 \
> E + --o-output output.qza...
> E
> E ...Full output truncated (17 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> _ test_examples[variadic_input_method-# ### example: variadic input simple
> ###\nqiime dummy-plugin variadic-input-method \\\n --i-ints ints_a.qza
> \\\n --i-ints ints_b.qza \\\n --i-int-set single_int1.qza \\\n
> --i-int-set single_int2.qza \\\n --p-nums 7 \\\n --p-nums 8 \\\n
> --p-nums 9 \\\n --o-output out.qza] _
>
> dummy_plugin = <qiime2.plugin.plugin.Plugin object at 0x7fd503d719c0>
> action = <method qiime2.plugins.dummy_plugin.methods.variadic_input_method>
> exp = '# ### example: variadic input simple ###\nqiime dummy-plugin
> variadic-input-method \\\n --i-ints ints_a.qza \\\n ...\\n --i-int-set
> single_int2.qza \\\n --p-nums 7 \\\n --p-nums 8 \\\n --p-nums 9 \\\n
> --o-output out.qza'
>
> @pytest.mark.parametrize('action, exp', params)
> def test_examples(dummy_plugin, action, exp):
> action = dummy_plugin.actions[action]
> result = list(examples(action))
> > assert exp == '\n'.join(result)
> E AssertionError: assert '# ### exampl...utput out.qza' == '# ###
> exampl...ut simple ###'
> E - # ### example: variadic input simple ###
> E + # ### example: variadic input simple ###
> E ? +
> E + qiime dummy-plugin variadic-input-method \
> E + --i-ints ints_a.qza \
> E + --i-ints ints_b.qza \
> E + --i-int-set single_int1.qza \...
> E
> E ...Full output truncated (6 lines hidden), use '-vv' to show
>
> q2cli/tests/test_usage.py:163: AssertionError
> =============================== warnings summary
> ===============================
> ../../../../../../usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:20
> /usr/lib/python3/dist-packages/qiime2/core/archive/provenance.py:20:
> DeprecationWarning: The distutils package is deprecated and slated for
> removal in Python 3.12. Use setuptools or check PEP 632 for potential
> alternatives
> import distutils
>
> .pybuild/cpython3_3.10/build/q2cli/tests/test_cli.py::CliTests::test_run_deprecated_gets_warning_msg
> /usr/lib/python3/dist-packages/qiime2/sdk/action.py:241: FutureWarning:
> This Method is deprecated and will be removed in a future version of this
> plugin.
> warn(self._build_deprecation_message(),
>
> -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
> =========================== short test summary info
> ============================
> FAILED q2cli/tests/test_usage.py::test_examples[concatenate_ints-# ###
> example: concatenate ints simple ###\n# This example demonstrates basic
> usage.\nqiime dummy-plugin concatenate-ints \\\n --i-ints1 ints_a.qza \\\n
> --i-ints2 ints_b.qza \\\n --i-ints3 ints_c.qza \\\n --p-int1 4 \\\n
> --p-int2 2 \\\n --o-concatenated-ints ints_d.qza\n# ### example:
> concatenate ints complex ###\n# This example demonstrates chained usage (pt
> 1).\nqiime dummy-plugin concatenate-ints \\\n --i-ints1 ints_a.qza \\\n
> --i-ints2 ints_b.qza \\\n --i-ints3 ints_c.qza \\\n --p-int1 4 \\\n
> --p-int2 2 \\\n --o-concatenated-ints ints_d.qza\n# This example
> demonstrates chained usage (pt 2).\nqiime dummy-plugin concatenate-ints \\\n
> --i-ints1 ints_d.qza \\\n --i-ints2 ints_b.qza \\\n --i-ints3
> ints_c.qza \\\n --p-int1 41 \\\n --p-int2 0 \\\n
> --o-concatenated-ints concatenated_ints.qza\n# ### example: comments only
> ###\n# comment 1\n# comment 2\n# ### example: comments only factory ###\n#
> comment 1\n# comment 2]
> FAILED q2cli/tests/test_usage.py::test_examples[identity_with_metadata-# ###
> example: identity with metadata simple ###\nqiime dummy-plugin
> identity-with-metadata \\\n --i-ints ints.qza \\\n --m-metadata-file
> md.tsv \\\n --o-out out.qza\n# ### example: identity with metadata merging
> ###\nqiime dummy-plugin identity-with-metadata \\\n --i-ints ints.qza \\\n
> --m-metadata-file md1.tsv \\\n --m-metadata-file md2.tsv \\\n
> --o-out out.qza]
> FAILED
> q2cli/tests/test_usage.py::test_examples[identity_with_metadata_column-# ###
> example: identity with metadata column get mdc ###\nqiime dummy-plugin
> identity-with-metadata-column \\\n --i-ints ints.qza \\\n
> --m-metadata-file md.tsv \\\n --m-metadata-column 'a' \\\n --o-out
> out.qza]
> FAILED q2cli/tests/test_usage.py::test_examples[typical_pipeline-# ###
> example: typical pipeline simple ###\nqiime dummy-plugin typical-pipeline
> \\\n --i-int-sequence ints.qza \\\n --i-mapping mapper.qza \\\n
> --p-do-extra-thing True \\\n --o-out-map out_map.qza \\\n --o-left
> left.qza \\\n --o-right right.qza \\\n --o-left-viz left_viz.qzv \\\n
> --o-right-viz right_viz.qzv\n# ### example: typical pipeline complex
> ###\nqiime dummy-plugin typical-pipeline \\\n --i-int-sequence ints1.qza
> \\\n --i-mapping mapper1.qza \\\n --p-do-extra-thing True \\\n
> --o-out-map out_map1.qza \\\n --o-left left1.qza \\\n --o-right
> right1.qza \\\n --o-left-viz left_viz1.qzv \\\n --o-right-viz
> right_viz1.qzv\nqiime dummy-plugin typical-pipeline \\\n --i-int-sequence
> left1.qza \\\n --i-mapping out_map1.qza \\\n --p-do-extra-thing False
> \\\n --o-out-map out_map2.qza \\\n --o-left left2.qza \\\n --o-right
> right2.qza \\\n --o-left-viz left_viz2.qzv \\\n --o-right-viz
> right_viz2.qzv]
> FAILED q2cli/tests/test_usage.py::test_examples[optional_artifacts_method-#
> ### example: optional inputs ###\nqiime dummy-plugin
> optional-artifacts-method \\\n --i-ints ints.qza \\\n --p-num1 1 \\\n
> --o-output output.qza\nqiime dummy-plugin optional-artifacts-method \\\n
> --i-ints ints.qza \\\n --p-num1 1 \\\n --p-num2 2 \\\n --o-output
> output.qza\nqiime dummy-plugin optional-artifacts-method \\\n --i-ints
> ints.qza \\\n --p-num1 1 \\\n --p-num2 None \\\n --o-output
> ints_b.qza\nqiime dummy-plugin optional-artifacts-method \\\n --i-ints
> ints.qza \\\n --i-optional1 ints_b.qza \\\n --p-num1 3 \\\n --p-num2
> 4 \\\n --o-output output.qza]
> FAILED q2cli/tests/test_usage.py::test_examples[variadic_input_method-# ###
> example: variadic input simple ###\nqiime dummy-plugin variadic-input-method
> \\\n --i-ints ints_a.qza \\\n --i-ints ints_b.qza \\\n --i-int-set
> single_int1.qza \\\n --i-int-set single_int2.qza \\\n --p-nums 7 \\\n
> --p-nums 8 \\\n --p-nums 9 \\\n --o-output out.qza]
> ================== 6 failed, 113 passed, 2 warnings in 5.48s
> ===================
> E: pybuild pybuild:369: test: plugin distutils failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10/build; python3.10 -m pytest
> dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.10
> returned exit code 13
The full build log is available from:
http://qa-logs.debian.net/2022/07/16/q2cli_2021.8.0-2_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20220716;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20220716&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: q2cli
Source-Version: 2022.8.0-1
Done: Nilesh Patra <nil...@debian.org>
We believe that the bug you reported is fixed in the latest version of
q2cli, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1015...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Nilesh Patra <nil...@debian.org> (supplier of updated q2cli package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 05 Sep 2022 13:56:16 +0000
Source: q2cli
Architecture: source
Version: 2022.8.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Nilesh Patra <nil...@debian.org>
Closes: 1015136 1018606
Changes:
q2cli (2022.8.0-1) unstable; urgency=medium
.
* Team upload.
* New upstream version 2022.8.0
* Drop d/p/fix-click8.patch: merged upstream
* Bump versioned Build-Depends: qiime (>= 2022.8.0)
* Ignore test_usage.py during build time tests as the package
cannot be checked for usability w/o installing. (Closes: #1015136)
Usage is being properly validated in autopkgtests
* Drop B-D on python3-nose (Closes: #1018606)
* d/t/run-unit-test: Update config file as per new q2cli (fixes autopkgtest)
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978bcf49a7f2d81e572e1a2c45feb0735fac87dc 69146 q2cli_2022.8.0.orig.tar.gz
4c88798875529a70d4238e7c71f103ce724434db 7716 q2cli_2022.8.0-1.debian.tar.xz
bfe841c618535e531cfae9e00a7867cd54206bc9 7506 q2cli_2022.8.0-1_amd64.buildinfo
Checksums-Sha256:
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q2cli_2022.8.0-1.dsc
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q2cli_2022.8.0-1_amd64.buildinfo
Files:
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8eb3f08887ee6503df83422e8a02d2dc 69146 science optional
q2cli_2022.8.0.orig.tar.gz
90e71136ffe279f3c8b324c126fbdfd9 7716 science optional
q2cli_2022.8.0-1.debian.tar.xz
0a530d0a4afb947e478770a92dbbd83d 7506 science optional
q2cli_2022.8.0-1_amd64.buildinfo
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--- End Message ---
