Bug#1028122: marked as done (sortmerna: FTBFS on i386)

Debian Bug Tracking System Sat, 07 Jan 2023 10:51:25 -0800

Your message dated Sat, 07 Jan 2023 18:48:55 +0000
with message-id <e1peeft-0024no...@fasolo.debian.org>
and subject line Bug#1028122: fixed in sortmerna 4.3.6-2
has caused the Debian Bug report #1028122,
regarding sortmerna: FTBFS on i386
to be marked as done.


This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1028122: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1028122
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

--- Begin Message ---

Source: sortmerna
Version: 4.3.6-1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

https://buildd.debian.org/status/fetch.php?pkg=sortmerna&arch=i386&ver=4.3.6-1&stamp=1673038926&raw=0

cd /<<PKGBUILDDIR>>/obj-i686-linux-gnu/src/sortmerna && /usr/bin/cc  
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/3rdparty/cmph 
-I/<<PKGBUILDDIR>>/3rdparty/concurrentqueue -I/<<PKGBUILDDIR>>/3rdparty/alp -g 
-O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat 
-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT 
src/sortmerna/CMakeFiles/smr_objs.dir/ssw.c.o -MF 
CMakeFiles/smr_objs.dir/ssw.c.o.d -o CMakeFiles/smr_objs.dir/ssw.c.o -c 
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c: In function ‘sw_sse2_byte’:
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:177:17: warning: SSE vector return without 
SSE enabled changes the ABI [-Wpsabi]
  177 |         __m128i vZero = _mm_set1_epi32(0);
      |                 ^~~~~
In file included from /<<PKGBUILDDIR>>/src/sortmerna/ssw.c:49:
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:654:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_set1_epi8’: target specific option 
mismatch
  654 | _mm_set1_epi8 (char __A)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:192:25: note: called from here
  192 |         __m128i vBias = _mm_set1_epi8(bias);
      |                         ^~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:654:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_set1_epi8’: target specific option 
mismatch
  654 | _mm_set1_epi8 (char __A)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:189:25: note: called from here
  189 |         __m128i vGapE = _mm_set1_epi8(weight_gapE);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:654:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_set1_epi8’: target specific option 
mismatch
  654 | _mm_set1_epi8 (char __A)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:186:25: note: called from here
  186 |         __m128i vGapO = _mm_set1_epi8(weight_gapO);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:642:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_set1_epi32’: target specific option 
mismatch
  642 | _mm_set1_epi32 (int __A)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:177:25: note: called from here
  177 |         __m128i vZero = _mm_set1_epi32(0);
      |                         ^~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1227:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_slli_si128’: target specific option 
mismatch
 1227 | _mm_slli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:217:22: note: called from here
  217 |                 vH = _mm_slli_si128(vH, 1); /* Shift the 128-bit value 
in vH left by 1 byte. */
      |                      ^~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:695:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_load_si128’: target specific option 
mismatch
  695 | _mm_load_si128 (__m128i const *__P)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:259:30: note: called from here
  259 |                         vH = _mm_load_si128(pvHLoad + j);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:256:30: note: called from here
  256 |                         vF = _mm_max_epu8(vF, vH);
      |                              ^~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:255:30: note: called from here
  255 |                         vF = _mm_subs_epu8(vF, vGapE);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:731:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_store_si128’: target specific option 
mismatch
  731 | _mm_store_si128 (__m128i *__P, __m128i __B)
      | ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:252:25: note: called from here
  252 |                         _mm_store_si128(pvE + j, e);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:251:29: note: called from here
  251 |                         e = _mm_max_epu8(e, vH);
      |                             ^~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:250:29: note: called from here
  250 |                         e = _mm_subs_epu8(e, vGapE);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:249:30: note: called from here
  249 |                         vH = _mm_subs_epu8(vH, vGapO); /* saturation 
arithmetic, result >= 0 */
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:731:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_store_si128’: target specific option 
mismatch
  731 | _mm_store_si128 (__m128i *__P, __m128i __B)
      | ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:246:25: note: called from here
  246 |                         _mm_store_si128(pvHStore + j, vH);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:239:38: note: called from here
  239 |                         vMaxColumn = _mm_max_epu8(vMaxColumn, vH);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:238:30: note: called from here
  238 |                         vH = _mm_max_epu8(vH, vF);
      |                              ^~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:237:30: note: called from here
  237 |                         vH = _mm_max_epu8(vH, e);
      |                              ^~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:695:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_load_si128’: target specific option 
mismatch
  695 | _mm_load_si128 (__m128i const *__P)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:236:29: note: called from here
  236 |                         e = _mm_load_si128(pvE + j);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:228:30: note: called from here
  228 |                         vH = _mm_subs_epu8(vH, vBias); /* vH will be 
always > 0 */
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1088:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_adds_epu8’: target specific option 
mismatch
 1088 | _mm_adds_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:227:30: note: called from here
  227 |                         vH = _mm_adds_epu8(vH, _mm_load_si128(vP + j));
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:695:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_load_si128’: target specific option 
mismatch
  695 | _mm_load_si128 (__m128i const *__P)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:227:30: note: called from here
  227 |                         vH = _mm_adds_epu8(vH, _mm_load_si128(vP + j));
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1431:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_movemask_epi8’: target specific option 
mismatch
 1431 | _mm_movemask_epi8 (__m128i __A)
      | ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:274:23: note: called from here
  274 |                 cmp = _mm_movemask_epi8(vTemp);
      |                       ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1333:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_cmpeq_epi8’: target specific option 
mismatch
 1333 | _mm_cmpeq_epi8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:273:25: note: called from here
  273 |                 vTemp = _mm_cmpeq_epi8(vTemp, vZero);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:272:25: note: called from here
  272 |                 vTemp = _mm_subs_epu8(vF, vTemp);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:271:25: note: called from here
  271 |                 vTemp = _mm_subs_epu8(vH, vGapO);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1227:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_slli_si128’: target specific option 
mismatch
 1227 | _mm_slli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:270:22: note: called from here
  270 |                 vF = _mm_slli_si128(vF, 1);
      |                      ^~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:695:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_load_si128’: target specific option 
mismatch
  695 | _mm_load_si128 (__m128i const *__P)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:265:22: note: called from here
  265 |                 vH = _mm_load_si128(pvHStore + j);
      |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:281:30: note: called from here
  281 |                         vF = _mm_subs_epu8(vF, vGapE);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:731:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_store_si128’: target specific option 
mismatch
  731 | _mm_store_si128 (__m128i *__P, __m128i __B)
      | ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:280:25: note: called from here
  280 |                         _mm_store_si128(pvHStore + j, vH);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:279:38: note: called from here
  279 |                         vMaxColumn = _mm_max_epu8(vMaxColumn, vH);
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:278:30: note: called from here
  278 |                         vH = _mm_max_epu8(vH, vF);
      |                              ^~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1227:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_slli_si128’: target specific option 
mismatch
 1227 | _mm_slli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:286:38: note: called from here
  286 |                                 vF = _mm_slli_si128(vF, 1);
      |                                      ^~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1431:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_movemask_epi8’: target specific option 
mismatch
 1431 | _mm_movemask_epi8 (__m128i __A)
      | ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:293:31: note: called from here
  293 |                         cmp = _mm_movemask_epi8(vTemp);
      |                               ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1333:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_cmpeq_epi8’: target specific option 
mismatch
 1333 | _mm_cmpeq_epi8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:292:33: note: called from here
  292 |                         vTemp = _mm_cmpeq_epi8(vTemp, vZero);
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:291:33: note: called from here
  291 |                         vTemp = _mm_subs_epu8(vF, vTemp);
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1136:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_subs_epu8’: target specific option 
mismatch
 1136 | _mm_subs_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:290:33: note: called from here
  290 |                         vTemp = _mm_subs_epu8(vH, vGapO);
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:695:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_load_si128’: target specific option 
mismatch
  695 | _mm_load_si128 (__m128i const *__P)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:288:30: note: called from here
  288 |                         vH = _mm_load_si128(pvHStore + j);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1431:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_movemask_epi8’: target specific option 
mismatch
 1431 | _mm_movemask_epi8 (__m128i __A)
      | ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:298:23: note: called from here
  298 |                 cmp = _mm_movemask_epi8(vTemp);
      |                       ^~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1333:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_cmpeq_epi8’: target specific option 
mismatch
 1333 | _mm_cmpeq_epi8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:297:25: note: called from here
  297 |                 vTemp = _mm_cmpeq_epi8(vMaxMark, vMaxScore);
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:296:29: note: called from here
  296 |                 vMaxScore = _mm_max_epu8(vMaxScore, vMaxColumn);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1388:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_extract_epi16’: target specific option 
mismatch
 1388 | _mm_extract_epi16 (__m128i const __A, int const __N)
      | ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:163:49: note: called from here
  163 |                                           (m) = _mm_extract_epi16((vm), 
0)
      |                                                 
^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:162:50: note: called from here
  162 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 1)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:162:50: note: called from here
  162 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 1)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:161:50: note: called from here
  161 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 2)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:161:50: note: called from here
  161 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 2)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:160:50: note: called from here
  160 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 4)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:160:50: note: called from here
  160 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 4)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:159:29: note: called from here
  159 | #define max16(m, vm) (vm) = _mm_max_epu8((vm), _mm_srli_si128((vm), 
8)); \
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:159:29: note: called from here
  159 | #define max16(m, vm) (vm) = _mm_max_epu8((vm), _mm_srli_si128((vm), 
8)); \
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:302:25: note: in expansion of macro ‘max16’
  302 |                         max16(temp, vMaxScore);
      |                         ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1388:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_extract_epi16’: target specific option 
mismatch
 1388 | _mm_extract_epi16 (__m128i const __A, int const __N)
      | ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:163:49: note: called from here
  163 |                                           (m) = _mm_extract_epi16((vm), 
0)
      |                                                 
^~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:162:50: note: called from here
  162 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 1)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:162:50: note: called from here
  162 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 1)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:161:50: note: called from here
  161 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 2)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:161:50: note: called from here
  161 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 2)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:160:50: note: called from here
  160 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 4)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:160:50: note: called from here
  160 |                                           (vm) = _mm_max_epu8((vm), 
_mm_srli_si128((vm), 4)); \
      |                                                  
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1413:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_max_epu8’: target specific option 
mismatch
 1413 | _mm_max_epu8 (__m128i __A, __m128i __B)
      | ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:159:29: note: called from here
  159 | #define max16(m, vm) (vm) = _mm_max_epu8((vm), _mm_srli_si128((vm), 
8)); \
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
/usr/lib/gcc/i686-linux-gnu/12/include/emmintrin.h:1221:1: error: inlining 
failed in call to ‘always_inline’ ‘_mm_srli_si128’: target specific option 
mismatch
 1221 | _mm_srli_si128 (__m128i __A, const int __N)
      | ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:159:29: note: called from here
  159 | #define max16(m, vm) (vm) = _mm_max_epu8((vm), _mm_srli_si128((vm), 
8)); \
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/src/sortmerna/ssw.c:317:17: note: in expansion of macro ‘max16’
  317 |                 max16(maxColumn[i], vMaxColumn);
      |                 ^~~~~
make[3]: *** [src/sortmerna/CMakeFiles/smr_objs.dir/build.make:331: 
src/sortmerna/CMakeFiles/smr_objs.dir/ssw.c.o] Error 1


Cheers
-- 
Sebastian Ramacher

--- End Message ---

--- Begin Message ---

Source: sortmerna
Source-Version: 4.3.6-2
Done: Étienne Mollier <emoll...@debian.org>

We believe that the bug you reported is fixed in the latest version of
sortmerna, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1028...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Étienne Mollier <emoll...@debian.org> (supplier of updated sortmerna package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sat, 07 Jan 2023 16:52:43 +0100
Source: sortmerna
Architecture: source
Version: 4.3.6-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team 
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emoll...@debian.org>
Closes: 1028122
Changes:
 sortmerna (4.3.6-2) unstable; urgency=medium
 .
   * d/rules: remove dh_clean override; not needed anymore.
   * d/rules: move to execute_after_ statements.
   * d/rules: verbose remove of cmake/ directories.
   * d/rules: verbose permissions changes.
   * d/control: add myself to uploaders.
   * d/control: declare compliance to standards version 4.6.2.
   * d/rules: build for i386 with -msse2.
     The package depends on sse2-support for that architecture, so this is
     not a baseline violation in this particular case. (Closes: #1028122)
Checksums-Sha1:
 821abdb4e9082df174a82c90cf3a97568ed57409 2270 sortmerna_4.3.6-2.dsc
 8634206c908b645d28335057046db1e537a248fc 10316 sortmerna_4.3.6-2.debian.tar.xz
Checksums-Sha256:
 cf6359481a172847f709021ee6c81a3d06f7cf0e9feb3b208bee823ca9a6baf5 2270 
sortmerna_4.3.6-2.dsc
 e820010669a9f33ee2849291d3427a8b5023d8d432783b56c26854bb7b780f48 10316 
sortmerna_4.3.6-2.debian.tar.xz
Files:
 b6b10743e0d64ce67507d2264216d5ec 2270 science optional sortmerna_4.3.6-2.dsc
 bc14ecb907b1b856cf1eb78502db2ea1 10316 science optional 
sortmerna_4.3.6-2.debian.tar.xz

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--- End Message ---

Bug#1028122: marked as done (sortmerna: FTBFS on i386)

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