Source: r-bioc-megadepth Version: 1.8.0+ds-1 Severity: serious Control: tags -1 bookworm-ignore User: debian...@lists.debian.org Usertags: regression
Dear maintainer(s),Your package has an autopkgtest, great. However, it fails in testing since March 2023. Can you please investigate the situation and fix it? I copied some of the output at the bottom of this report.
The release team has announced [1] that failing autopkgtest on amd64 and arm64 are considered RC in testing. [Release Team member hat on] Because we're currently in the hard freeze for bookworm, I have marked this bug as bookworm-ignore. Targeted fixes are still welcome.
More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation
Paul [1] https://lists.debian.org/debian-devel-announce/2019/07/msg00002.html https://ci.debian.net/data/autopkgtest/testing/amd64/r/r-bioc-megadepth/32560589/log.gz══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-megadepth_main_tests.R:74'): test bigwig2mean on remote bw ─── readLines(file.path(tempdir(), "bw2.remote.mean.annotation.tsv")) (`actual`) not equal to readLines("https://raw.githubusercontent.com/ChristopherWilks/megadepth/master/tests/testbw2.bed.mean";) (`expected`).
actual | expected
- "chr10\t0\t10\t0.00" [1]
- "chr10\t8756697\t8756762\t15.85" [2]
- "chr10\t4359156\t4359188\t3.00" [3]
- "GL000219.1\t168500\t168620\t1.26" [4]
[ FAIL 1 | WARN 1 | SKIP 0 | PASS 129 ]
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