Your message dated Mon, 11 Sep 2023 23:19:04 +0000
with message-id <e1qfqbm-00av6g...@fasolo.debian.org>
and subject line Bug#1050026: fixed in r-bioc-metagenomeseq 1.42.0-2
has caused the Debian Bug report #1050026,
regarding r-bioc-metagenomeseq: autopkgtest regression
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1050026: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1050026
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-bioc-metagenomeseq
Version: 1.42.0-1
Severity: serious
User: debian...@lists.debian.org
Usertags: regression
Hi Maintainer
The upload of r-bioc-metagenomeseq 1.42.0-1 is failing its own
autopkgtest [1]. I've copied what I hope is the relevant part of the
log below.
Regards
Graham
[1] https://ci.debian.net/packages/r/r-bioc-metagenomeseq/testing/amd64/
48s Loading required package: glmnet
48s Loading required package: Matrix
49s Loaded glmnet 4.1-7
49s Loading required package: RColorBrewer
106s [ FAIL 2 | WARN 6 | SKIP 0 | PASS 13 ]
106s
106s ══ Failed tests
════════════════════════════════════════════════════════════════
106s ── Failure ('test-norm.R:28:3'): `cumNormStat` returns the
correct value ───────
106s cumNormStat(lungData) not equal to 0.7014946.
106s names for target but not for current
106s ── Failure ('test-norm.R:34:3'): `cumNormStatFast` returns the
correct value ───
106s cumNormStatFast(lungData) not equal to 0.7014946.
106s names for target but not for current
106s
106s [ FAIL 2 | WARN 6 | SKIP 0 | PASS 13 ]
106s Error: Test failures
106s Execution halted
--- End Message ---
--- Begin Message ---
Source: r-bioc-metagenomeseq
Source-Version: 1.42.0-2
Done: Charles Plessy <ple...@debian.org>
We believe that the bug you reported is fixed in the latest version of
r-bioc-metagenomeseq, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1050...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Charles Plessy <ple...@debian.org> (supplier of updated r-bioc-metagenomeseq
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Mon, 11 Sep 2023 22:41:53 +0000
Source: r-bioc-metagenomeseq
Architecture: source
Version: 1.42.0-2
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net>
Changed-By: Charles Plessy <ple...@debian.org>
Closes: 1050026
Changes:
r-bioc-metagenomeseq (1.42.0-2) unstable; urgency=medium
.
* Team upload.
* Fix broken upstream tests. (Closes: #1050026)
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