Your message dated Mon, 18 Dec 2023 14:41:31 +0000
with message-id <e1rfeof-007yfl...@fasolo.debian.org>
and subject line Bug#1056089: fixed in autodock-vina 1.2.5-2
has caused the Debian Bug report #1056089,
regarding autodock-vina: FTBFS: boost1.83 transition
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1056089: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056089
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: autodock-vina
Version: 1.2.5-1
Severity: normal
User: gl...@debian.org
Usertags: boost183 ftbfs-boost183-transition
Hi,
we are preparing the transition of all libs on the new boost 1.83. During the
rebuild of packages against this library it was identified that probably your
package fails to build.
Relevant part (hopefully):
-----
/usr/include/boost/progress.hpp:23:3: error: #error This header is deprecated
and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress
this error.)
23 | # error This header is deprecated and will be removed. (You can define
BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
| ^~~~~
-----
To reproduce this behavior, you can install -dev Boost packages from the
experimental repository, as shown in the following command:
apt install libboost-dev -t experimental
The full build log is available from:
http://qa-logs.debian.net/2023/10/27/autodock-vina_1.2.5-1_unstable_boost181.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-boost183-transition;users=gl...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-boost183-transition&fusertaguser=gl...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you are unable to reproduce this, please provide a build log and diff it
so that we can identify any relevant changes that may have occurred in the
meantime.
--- End Message ---
--- Begin Message ---
Source: autodock-vina
Source-Version: 1.2.5-2
Done: Étienne Mollier <emoll...@debian.org>
We believe that the bug you reported is fixed in the latest version of
autodock-vina, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1056...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Étienne Mollier <emoll...@debian.org> (supplier of updated autodock-vina
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 18 Dec 2023 15:02:05 +0100
Source: autodock-vina
Architecture: source
Version: 1.2.5-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emoll...@debian.org>
Closes: 1056089
Changes:
autodock-vina (1.2.5-2) unstable; urgency=medium
.
* Team upload.
* boost1.83.patch: new: fix ftbfs with boost 1.83.
Thanks to jalegido (Closes: #1056089)
* d/t/run-unit-test: remove bashisms flagged by lintian.
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autodock-vina_1.2.5-2.dsc
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