Your message dated Mon, 15 Jan 2024 07:36:48 +0000
with message-id <[email protected]>
and subject line Bug#1058278: fixed in r-bioc-demixt 1.18.0+dfsg-1
has caused the Debian Bug report #1058278,
regarding r-bioc-demixt: FTBFS: build-dependency not installable:
r-api-bioc-3.17
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1058278: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1058278
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: r-bioc-demixt
Version: 1.16.0+dfsg-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: [email protected]
Usertags: ftbfs-20231212 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
> +------------------------------------------------------------------------------+
> | Install package build dependencies
> |
> +------------------------------------------------------------------------------+
>
>
> Setup apt archive
> -----------------
>
> Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-rcpp
> (>= 1.0.0), r-bioc-summarizedexperiment, r-cran-knitr, r-cran-kernsmooth,
> r-cran-matrixcalc, r-cran-rmarkdown, r-bioc-dss, r-cran-dendextend,
> r-cran-psych, r-bioc-sva, r-cran-matrixstats, r-cran-truncdist,
> r-cran-base64enc, r-cran-ggplot2, build-essential, fakeroot
> Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev,
> r-cran-rcpp (>= 1.0.0), r-bioc-summarizedexperiment, r-cran-knitr,
> r-cran-kernsmooth, r-cran-matrixcalc, r-cran-rmarkdown, r-bioc-dss,
> r-cran-dendextend, r-cran-psych, r-bioc-sva, r-cran-matrixstats,
> r-cran-truncdist, r-cran-base64enc, r-cran-ggplot2, build-essential, fakeroot
> dpkg-deb: building package 'sbuild-build-depends-main-dummy' in
> '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
> Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
> Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [609 B]
> Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
> Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [887 B]
> Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [920 B]
> Fetched 2416 B in 0s (0 B/s)
> Reading package lists...
> Reading package lists...
>
> Install main build dependencies (apt-based resolver)
> ----------------------------------------------------
>
> Installing build dependencies
> Reading package lists...
> Building dependency tree...
> Some packages could not be installed. This may mean that you have
> requested an impossible situation or if you are using the unstable
> distribution that some required packages have not yet been created
> or been moved out of Incoming.
> The following information may help to resolve the situation:
>
> The following packages have unmet dependencies:
> r-bioc-dss : Depends: r-api-bioc-3.17 but it is not installable
> E: Unable to correct problems, you have held broken packages.
> apt-get failed.
The full build log is available from:
http://qa-logs.debian.net/2023/12/12/r-bioc-demixt_1.16.0+dfsg-1_unstable.log
All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20231212;[email protected]
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20231212&[email protected]&allbugs=1&cseverity=1&ctags=1&caffected=1#results
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects
If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: r-bioc-demixt
Source-Version: 1.18.0+dfsg-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
r-bioc-demixt, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated r-bioc-demixt package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 15 Jan 2024 08:11:59 +0100
Source: r-bioc-demixt
Architecture: source
Version: 1.18.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1058278
Changes:
r-bioc-demixt (1.18.0+dfsg-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
Closes: #1058278
* Remove vignette based test
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