Your message dated Fri, 03 May 2024 17:20:52 +0000
with message-id <e1s2waa-007rkr...@fasolo.debian.org>
and subject line Bug#1070300: fixed in openmpi 4.1.6-13.1
has caused the Debian Bug report #1070300,
regarding pmix_psquash_base_select failed during MPI_INIT on 32bit architectures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1070300: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1070300
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: openmpi
Version: 4.1.6-13
Severity: serious
Justification: unkown
Control: affects -1 src:dune-grid
Dear Maintainer,
I just uploaded a new version of package dune-grid and noticed that none of our
parallel tests start successfully on 32bit
architectures.
2/66 Test #2: scsgmappertest
........................................***Failed 0.15 sec
--------------------------------------------------------------------------
It looks like pmix_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during pmix_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
PMIX developer):
pmix_psquash_base_select failed
--> Returned value -46 instead of PMIX_SUCCESS
--------------------------------------------------------------------------
[arm-ubc-05:12560] PMIX ERROR: NOT-FOUND in file
../../../../../../../../opal/mca/pmix/pmix3x/pmix/src/server/pmix_server.c at
line 237
[arm-ubc-05:12559] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon
on the local node in file
../../../../../../orte/mca/ess/singleton/ess_singleton_module.c at line 716
[arm-ubc-05:12559] [[INVALID],INVALID] ORTE_ERROR_LOG: Unable to start a daemon
on the local node in file
../../../../../../orte/mca/ess/singleton/ess_singleton_module.c at line 172
--------------------------------------------------------------------------
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):
orte_ess_init failed
--> Returned value Unable to start a daemon on the local node (-127) instead
of ORTE_SUCCESS
--------------------------------------------------------------------------
--------------------------------------------------------------------------
It looks like MPI_INIT failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during MPI_INIT; some of which are due to configuration or environment
problems. This failure appears to be an internal failure; here's some
additional information (which may only be relevant to an Open MPI
developer):
ompi_mpi_init: ompi_rte_init failed
--> Returned "Unable to start a daemon on the local node" (-127) instead of
"Success" (0)
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
*** and potentially your MPI job)
[arm-ubc-05:12559] Local abort before MPI_INIT completed completed
successfully, but am not able to aggregate error messages, and not able to
guarantee that all other processes were killed!
See [1] for a complete build where the tests using mpirun fail in this way.
This happens on these architectures: armel, armhf, i386, hppa
Best,
Markus
[1] https://buildd.debian.org/status/fetch.php?pkg=dune-
grid&arch=armel&ver=2.9.0-4&stamp=1714724856&raw=0
-- System Information:
Debian Release: 12.5
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable-security'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 6.1.0-20-amd64 (SMP w/64 CPU threads; PREEMPT)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
Versions of packages openmpi-bin depends on:
ii libc6 2.36-9+deb12u6
ii libevent-core-2.1-7 2.1.12-stable-8
ii libopenmpi3 4.1.4-3+b1
ii openmpi-common 4.1.4-3
ii openssh-client [ssh-client] 1:9.2p1-2+deb12u2
openmpi-bin recommends no packages.
Versions of packages openmpi-bin suggests:
ii gfortran [fortran-compiler] 4:12.2.0-3
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: openmpi
Source-Version: 4.1.6-13.1
Done: Samuel Thibault <sthiba...@debian.org>
We believe that the bug you reported is fixed in the latest version of
openmpi, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1070...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Samuel Thibault <sthiba...@debian.org> (supplier of updated openmpi package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 03 May 2024 18:53:52 +0200
Source: openmpi
Architecture: source
Version: 4.1.6-13.1
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <mckins...@debian.org>
Changed-By: Samuel Thibault <sthiba...@debian.org>
Closes: 1070300
Changes:
openmpi (4.1.6-13.1) unstable; urgency=medium
.
* Non-maintainer Upload
* Also install pmix components on 32-bit systems. Closes: #1070300
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