Your message dated Sun, 24 Nov 2024 12:36:16 +0000
with message-id <[email protected]>
and subject line Bug#1013061: fixed in vg 1.59.0+ds-0.1
has caused the Debian Bug report #1013061,
regarding vg: ftbfs with GCC-12
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1013061: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1013061
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:vg
Version: 1.30.0+ds-1
Severity: normal
Tags: sid bookworm
User: [email protected]
Usertags: ftbfs-gcc-12
[This bug is targeted to the upcoming bookworm release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-12/g++-12, but succeeds to build with gcc-11/g++-11. The
severity of this report will be raised before the bookworm release.
The full build log can be found at:
http://qa-logs.debian.net/2022/06/09/gcc12/vg_1.30.0+ds-1_unstable_gcc12.log
The last lines of the build log are at the end of this report.
To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-11/porting_to.html
GCC 11 defaults to the GNU++17 standard. If your package installs
header files in /usr/include, please don't work around C++17 issues
by choosing a lower C++ standard for the package build, but fix these
issues to build with the C++17 standard.
[...]
/usr/include/c++/12/bits/shared_ptr.h:175:11: note: ‘class
std::shared_ptr<std::pair<std::__cxx11::basic_string<char>,
std::__cxx11::basic_string<char> > >’ declared here
175 | class shared_ptr : public __shared_ptr<_Tp>
| ^~~~~~~~~~
v_array.h: In instantiation of ‘void v_array<T>::resize(size_t) [with T =
feature_slice; size_t = long unsigned int]’:
v_array.h:94:7: required from ‘void v_array<T>::push_back(const T&) [with T =
feature_slice]’
feature_group.h:315:24: required from here
v_array.h:62:29: warning: ‘void* realloc(void*, size_t)’ moving an object of
non-trivially copyable type ‘struct feature_slice’; use ‘new’ and ‘delete’
instead [-Wclass-memaccess]
62 | T* temp = (T *)realloc(_begin, sizeof(T) * length);
| ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from example.h:17,
from global_data.h:24:
feature_group.h:26:8: note: ‘struct feature_slice’ declared here
26 | struct feature_slice //a helper struct for functions using the set
{v,i,space_name}
| ^~~~~~~~~~~~~
v_array.h:68:46: warning: comparing the result of pointer addition
‘(((v_array<feature_slice>*)this)->v_array<feature_slice>::_begin +
((sizetype)(old_len * 80)))’ and NULL [-Waddress]
68 | if (old_len < length && _begin+old_len != nullptr)
| ~~~~~~~~~~~~~~~^~~~~~~~~~
v_array.h:69:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object
of type ‘struct feature_slice’ with no trivial copy-assignment; use assignment
or value-initialization instead [-Wclass-memaccess]
69 | memset(_begin+old_len, 0, (length-old_len)*sizeof(T));
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
feature_group.h:26:8: note: ‘struct feature_slice’ declared here
26 | struct feature_slice //a helper struct for functions using the set
{v,i,space_name}
| ^~~~~~~~~~~~~
v_array.h: In instantiation of ‘void v_array<T>::resize(size_t) [with T =
feature; size_t = long unsigned int]’:
v_array.h:94:7: required from ‘void v_array<T>::push_back(const T&) [with T =
feature]’
feature_group.h:329:24: required from here
v_array.h:68:46: warning: comparing the result of pointer addition
‘(((v_array<feature>*)this)->v_array<feature>::_begin + ((sizetype)(old_len *
16)))’ and NULL [-Waddress]
68 | if (old_len < length && _begin+old_len != nullptr)
| ~~~~~~~~~~~~~~~^~~~~~~~~~
v_array.h:69:15: warning: ‘void* memset(void*, int, size_t)’ clearing an object
of non-trivial type ‘struct feature’; use assignment or value-initialization
instead [-Wclass-memaccess]
69 | memset(_begin+old_len, 0, (length-old_len)*sizeof(T));
| ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
feature_group.h:19:8: note: ‘struct feature’ declared here
19 | struct feature //sparse feature definition for the library interface
| ^~~~~~~
v_array.h: In instantiation of ‘void v_array<T>::resize(size_t) [with T =
v_hashmap<substring, long unsigned int>::hash_elem; size_t = long unsigned
int]’:
v_hashmap.h:57:15: required from ‘void v_hashmap<K, V>::init(size_t, V, bool
(*)(K&, K&)) [with K = substring; V = long unsigned int; size_t = long unsigned
int]’
global_data.h:157:17: required from here
v_array.h:68:46: warning: comparing the result of pointer addition
‘(((v_array<v_hashmap<substring, long unsigned
int>::hash_elem>*)this)->v_array<v_hashmap<substring, long unsigned
int>::hash_elem>::_begin + ((sizetype)(old_len * 40)))’ and NULL [-Waddress]
68 | if (old_len < length && _begin+old_len != nullptr)
| ~~~~~~~~~~~~~~~^~~~~~~~~~
libtool: compile: g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2
-I/include -Wall -Wno-unused-local-typedefs -pedantic -I /usr/include/rapidjson
-O3 -fomit-frame-pointer -DNDEBUG -O3 -Werror=return-type -std=c++14 -ggdb -g
-g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
-Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3
-I/usr/include/fastahack -I/usr/include/smithwaterman -I/usr/include/vcflib
-I/usr/include/smithwaterman -I/usr/include/fastahack
-I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/include -I.
-I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/src/unittest
-I/<<PKGBUILDDIR>>/src/subcommand -I/<<PKGBUILDDIR>>/include/dynamic -pthread
-isystem /usr/include/cairo -isystem /usr/include/glib-2.0 -isystem
/usr/lib/x86_64-linux-gnu/glib-2.0/include -isystem /usr/include/pixman-1
-isystem /usr/include/uuid -isystem /usr/include/freetype2 -isystem
/usr/include/libpng16 -MT classweight.lo -MD -MP -MF .deps/classweight.Tpo -c
classweight.cc -o classweight.o >/dev/null 2>&1
mv -f .deps/vw-main.Tpo .deps/vw-main.Po
/bin/bash ../libtool --tag=CXX --mode=link g++ -I/include -Wall
-Wno-unused-local-typedefs -pedantic -I /usr/include/rapidjson -O3
-fomit-frame-pointer -DNDEBUG -O3 -Werror=return-type -std=c++14 -ggdb -g -g
-O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
-Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3
-I/usr/include/fastahack -I/usr/include/smithwaterman -I/usr/include/vcflib
-I/usr/include/smithwaterman -I/usr/include/fastahack
-I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/include -I.
-I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/src/unittest
-I/<<PKGBUILDDIR>>/src/subcommand -I/<<PKGBUILDDIR>>/include/dynamic -pthread
-isystem /usr/include/cairo -isystem /usr/include/glib-2.0 -isystem
/usr/lib/x86_64-linux-gnu/glib-2.0/include -isystem /usr/include/pixman-1
-isystem /usr/include/uuid -isystem /usr/include/freetype2 -isystem
/usr/include/libpng16 -L/<<PKGBUILDDIR>>/lib -o libvw.la -rpath /usr/local/lib
hash.lo parser_
helper.lo global_data.lo io_buf.lo parse_regressor.lo parse_primitives.lo
unique_sort.lo cache.lo rand48.lo simple_label.lo multiclass.lo oaa.lo
multilabel_oaa.lo boosting.lo ect.lo marginal.lo autolink.lo binary.lo lrq.lo
cost_sensitive.lo multilabel.lo label_dictionary.lo csoaa.lo cb.lo cb_adf.lo
cb_algs.lo search.lo search_meta.lo search_sequencetask.lo search_dep_parser.lo
search_hooktask.lo search_multiclasstask.lo search_entityrelationtask.lo
search_graph.lo parse_example.lo scorer.lo network.lo parse_args.lo
accumulate.lo gd.lo learner.lo mwt.lo lda_core.lo gd_mf.lo mf.lo bfgs.lo
noop.lo print.lo example.lo parser.lo loss_functions.lo sender.lo nn.lo
confidence.lo bs.lo cbify.lo explore_eval.lo topk.lo stagewise_poly.lo
log_multi.lo recall_tree.lo active.lo active_cover.lo cs_active.lo
kernel_svm.lo best_constant.lo ftrl.lo svrg.lo lrqfa.lo interact.lo comp_io.lo
interactions.lo vw_exception.lo vw_validate.lo audit_regressor.lo
gen_cs_example.lo cb_explore.lo action_score.lo
cb_explore_adf.lo OjaNewton.lo parse_example_json.lo baseline.lo
classweight.lo liballreduce.la -lboost_program_options -L/lib -lz -lpthread
libtool: link: g++ -fPIC -DPIC -shared -nostdlib
/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crti.o
/usr/lib/gcc/x86_64-linux-gnu/12/crtbeginS.o .libs/hash.o
.libs/parser_helper.o .libs/global_data.o .libs/io_buf.o
.libs/parse_regressor.o .libs/parse_primitives.o .libs/unique_sort.o
.libs/cache.o .libs/rand48.o .libs/simple_label.o .libs/multiclass.o
.libs/oaa.o .libs/multilabel_oaa.o .libs/boosting.o .libs/ect.o
.libs/marginal.o .libs/autolink.o .libs/binary.o .libs/lrq.o
.libs/cost_sensitive.o .libs/multilabel.o .libs/label_dictionary.o
.libs/csoaa.o .libs/cb.o .libs/cb_adf.o .libs/cb_algs.o .libs/search.o
.libs/search_meta.o .libs/search_sequencetask.o .libs/search_dep_parser.o
.libs/search_hooktask.o .libs/search_multiclasstask.o
.libs/search_entityrelationtask.o .libs/search_graph.o .libs/parse_example.o
.libs/scorer.o .libs/network.o .libs/parse_args.o .libs/accumulate.o .libs/gd.o
.libs/learner.o .libs/mwt.o .libs/lda_core.o .libs/gd_mf.o .libs/mf.o .libs/bfgs
.o .libs/noop.o .libs/print.o .libs/example.o .libs/parser.o
.libs/loss_functions.o .libs/sender.o .libs/nn.o .libs/confidence.o .libs/bs.o
.libs/cbify.o .libs/explore_eval.o .libs/topk.o .libs/stagewise_poly.o
.libs/log_multi.o .libs/recall_tree.o .libs/active.o .libs/active_cover.o
.libs/cs_active.o .libs/kernel_svm.o .libs/best_constant.o .libs/ftrl.o
.libs/svrg.o .libs/lrqfa.o .libs/interact.o .libs/comp_io.o
.libs/interactions.o .libs/vw_exception.o .libs/vw_validate.o
.libs/audit_regressor.o .libs/gen_cs_example.o .libs/cb_explore.o
.libs/action_score.o .libs/cb_explore_adf.o .libs/OjaNewton.o
.libs/parse_example_json.o .libs/baseline.o .libs/classweight.o -Wl,-rpath
-Wl,/<<PKGBUILDDIR>>/deps/vowpal_wabbit/vowpalwabbit/.libs
-L/<<PKGBUILDDIR>>/lib ./.libs/liballreduce.so -lboost_program_options -L/lib
-lz -L/<<PKGBUILDDIR>>/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/12
-L/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu
-L/usr/lib/gcc/x86_64-linux-gnu/12/../../../..
/lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu
-L/usr/lib/../lib -L. -L/usr/lib/gcc/x86_64-linux-gnu/12/../../.. -lstdc++ -lm
-lpthread -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/12/crtendS.o
/usr/lib/gcc/x86_64-linux-gnu/12/../../../x86_64-linux-gnu/crtn.o -O3 -O3
-ggdb -g -g -O2 -fstack-protector-strong -O3 -msse3 -pthread -Wl,-soname
-Wl,libvw.so.0 -o .libs/libvw.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libvw.so.0" && ln -s "libvw.so.0.0.0"
"libvw.so.0")
libtool: link: (cd ".libs" && rm -f "libvw.so" && ln -s "libvw.so.0.0.0"
"libvw.so")
libtool: link: ar cr .libs/libvw.a hash.o parser_helper.o global_data.o
io_buf.o parse_regressor.o parse_primitives.o unique_sort.o cache.o rand48.o
simple_label.o multiclass.o oaa.o multilabel_oaa.o boosting.o ect.o marginal.o
autolink.o binary.o lrq.o cost_sensitive.o multilabel.o label_dictionary.o
csoaa.o cb.o cb_adf.o cb_algs.o search.o search_meta.o search_sequencetask.o
search_dep_parser.o search_hooktask.o search_multiclasstask.o
search_entityrelationtask.o search_graph.o parse_example.o scorer.o network.o
parse_args.o accumulate.o gd.o learner.o mwt.o lda_core.o gd_mf.o mf.o bfgs.o
noop.o print.o example.o parser.o loss_functions.o sender.o nn.o confidence.o
bs.o cbify.o explore_eval.o topk.o stagewise_poly.o log_multi.o recall_tree.o
active.o active_cover.o cs_active.o kernel_svm.o best_constant.o ftrl.o svrg.o
lrqfa.o interact.o comp_io.o interactions.o vw_exception.o vw_validate.o
audit_regressor.o gen_cs_example.o cb_explore.o action_score.o cb_explore_adf.o
OjaNewton.o
parse_example_json.o baseline.o classweight.o
libtool: link: ranlib .libs/libvw.a
libtool: link: ( cd ".libs" && rm -f "libvw.la" && ln -s "../libvw.la"
"libvw.la" )
/bin/bash ../libtool --tag=CXX --mode=link g++ -I/include -Wall
-Wno-unused-local-typedefs -pedantic -I /usr/include/rapidjson -O3
-fomit-frame-pointer -DNDEBUG -O3 -Werror=return-type -std=c++14 -ggdb -g -g
-O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
-Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3
-I/usr/include/fastahack -I/usr/include/smithwaterman -I/usr/include/vcflib
-I/usr/include/smithwaterman -I/usr/include/fastahack
-I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/include -I.
-I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/src/unittest
-I/<<PKGBUILDDIR>>/src/subcommand -I/<<PKGBUILDDIR>>/include/dynamic -pthread
-isystem /usr/include/cairo -isystem /usr/include/glib-2.0 -isystem
/usr/lib/x86_64-linux-gnu/glib-2.0/include -isystem /usr/include/pixman-1
-isystem /usr/include/uuid -isystem /usr/include/freetype2 -isystem
/usr/include/libpng16 -L/<<PKGBUILDDIR>>/lib -o vw vw-main.o libvw.la
liballreduce.la -lboost
_program_options -L/lib -lz -lpthread
libtool: link: g++ -I/include -Wall -Wno-unused-local-typedefs -pedantic -I
/usr/include/rapidjson -O3 -fomit-frame-pointer -DNDEBUG -O3
-Werror=return-type -std=c++14 -ggdb -g -g -O2
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat
-Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -msse3
-I/usr/include/fastahack -I/usr/include/smithwaterman -I/usr/include/vcflib
-I/usr/include/smithwaterman -I/usr/include/fastahack
-I/<<PKGBUILDDIR>>/include -isystem /<<PKGBUILDDIR>>/include -I.
-I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/src/unittest
-I/<<PKGBUILDDIR>>/src/subcommand -I/<<PKGBUILDDIR>>/include/dynamic -isystem
/usr/include/cairo -isystem /usr/include/glib-2.0 -isystem
/usr/lib/x86_64-linux-gnu/glib-2.0/include -isystem /usr/include/pixman-1
-isystem /usr/include/uuid -isystem /usr/include/freetype2 -isystem
/usr/include/libpng16 -o .libs/vw vw-main.o -L/<<PKGBUILDDIR>>/lib
./.libs/libvw.so ./.libs/liballreduce.so -lboost_program_options -L/lib -lz
-lpthread -pthread
/usr/bin/ld: ./.libs/libvw.so: undefined reference to `void
GD::vec_add_multipredict<sparse_parameters>(GD::multipredict_info<sparse_parameters>&,
float, unsigned long)'
/usr/bin/ld: ./.libs/libvw.so: undefined reference to `void
GD::vec_add_trunc_multipredict<sparse_parameters>(GD::multipredict_info<sparse_parameters>&,
float, unsigned long)'
/usr/bin/ld: ./.libs/libvw.so: undefined reference to `void
GD::vec_add_multipredict<dense_parameters>(GD::multipredict_info<dense_parameters>&,
float, unsigned long)'
/usr/bin/ld: ./.libs/libvw.so: undefined reference to `void
GD::vec_add_trunc_multipredict<dense_parameters>(GD::multipredict_info<dense_parameters>&,
float, unsigned long)'
collect2: error: ld returned 1 exit status
make[5]: *** [Makefile:622: vw] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/deps/vowpal_wabbit/vowpalwabbit'
make[4]: *** [Makefile:477: all] Error 2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/deps/vowpal_wabbit/vowpalwabbit'
make[3]: *** [Makefile:569: all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/deps/vowpal_wabbit'
make[2]: *** [Makefile:502: lib/libvw.a] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j8 "INSTALL=install --strip-program=true" SFX=-sse3
all test/build_graph bin/shuf returned exit code 2
make[1]: *** [debian/rules:40: override_dh_auto_build-arch] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:22: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: vg
Source-Version: 1.59.0+ds-0.1
Done: Bastian Germann <[email protected]>
We believe that the bug you reported is fixed in the latest version of
vg, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Bastian Germann <[email protected]> (supplier of updated vg package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 21 Nov 2024 00:12:52 +0000
Source: vg
Architecture: source
Version: 1.59.0+ds-0.1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Bastian Germann <[email protected]>
Closes: 1013061 1043312 1084554
Changes:
vg (1.59.0+ds-0.1) unstable; urgency=medium
.
* Non-maintainer upload
.
[ Andreas Tille ]
* Update lintian override info to new format:
+ debian/source/lintian-overrides: line 2
+ debian/vg.lintian-overrides: line 5, 8-12
* Remove constraints unnecessary since buster (oldstable):
+ Build-Depends: Replace dependency on transitional package libncurses5-dev
with replacement libtinfo6, libncurses-dev.
.
[ Pierre Gruet ]
* Using tags and filenamemangle in d/watch
.
[ Michael R. Crusoe ]
* New upstream version. Closes: #1013061, #1084554
* Added patch to deal with bashim.
* debian/rules: unset LD_PRELOAD for qemu build + testing
* debian/rules: if the SIMD level is supported by the build CPU as reported
by lscpu, then require the tests for that version of the vg binary to
pass.
* debian/copyright: freshen
* Freshen patches
* update clean list
* Standards-Version: 4.6.2 (routine-update)
* Keep vendored copy of libssw until vg updates to a regular release
* Refreshed patches, moved some of the crossbuild fixes into earlier
patches to reduce churn.
* d/patches/series: skip the ssw patches to use the code copy for now.
* d/control: new build-dep: libzstd-dev
* Force the use of the system package for SIMDe.
* Added patch to fix gcc 12+ issues.
* d/copyright: exclude the unused benchmarks.js from the vendored
copies of atomic_queue
* d/control: update names of obsolete packages to their replacements.
Closes: #1043312
* Ignore test failures
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