Package: src:python-cai
Version: 1.0.2-4
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem pybuild --with python3,sphinxdoc
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:311: python3.13 setup.py config
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running config
I: pybuild base:311: python3.12 setup.py config
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running config
dh_auto_build -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py build
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI
copying CAI/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI
copying CAI/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI
copying CAI/CAI.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI
I: pybuild base:311: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI
copying CAI/cli.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI
copying CAI/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI
copying CAI/CAI.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI
debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_test -- --test-pytest
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build;
python3.13 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>
plugins: typeguard-4.4.1
collected 15 items
tests/test_cai.py ..... [ 33%]
tests/test_relative_adaptiveness.py .... [ 60%]
tests/test_rscu.py ...... [100%]
=============================== warnings summary ===============================
.pybuild/cpython3_3.13_cai/build/tests/test_cai.py::test_only_non_synonymous
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/CAI.py:213:
SmallSampleWarning: One or more sample arguments is too small; all returned
values will be NaN. See documentation for sample size requirements.
return float(gmean(sequence_weights))
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
======================== 15 passed, 1 warning in 0.28s =========================
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build;
python3.12 -m pytest tests
============================= test session starts ==============================
platform linux -- Python 3.12.8, pytest-8.3.4, pluggy-1.5.0
rootdir: /<<PKGBUILDDIR>>
plugins: typeguard-4.4.1
collected 15 items
tests/test_cai.py ..... [ 33%]
tests/test_relative_adaptiveness.py .... [ 60%]
tests/test_rscu.py ...... [100%]
=============================== warnings summary ===============================
.pybuild/cpython3_3.12_cai/build/tests/test_cai.py::test_only_non_synonymous
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/CAI.py:213:
SmallSampleWarning: One or more sample arguments is too small; all returned
values will be NaN. See documentation for sample size requirements.
return float(gmean(sequence_weights))
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
======================== 15 passed, 1 warning in 0.30s =========================
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
dh_auto_install -O--buildsystem=pybuild
I: pybuild base:311: /usr/bin/python3.13 setup.py install --root
/<<PKGBUILDDIR>>/debian/python3-cai
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66:
SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html
for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages
creating
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/cli.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI
creating
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/__pycache__
copying
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/__pycache__/__init__.cpython-313.pyc
->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/__pycache__
copying
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/__pycache__/CAI.cpython-313.pyc
->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/__init__.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_cai/build/CAI/CAI.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/cli.py
to cli.cpython-313.pyc
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/__init__.py
to __init__.cpython-313.pyc
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI/CAI.py
to CAI.cpython-313.pyc
running install_egg_info
running egg_info
creating CAI.egg-info
writing CAI.egg-info/PKG-INFO
writing dependency_links to CAI.egg-info/dependency_links.txt
writing entry points to CAI.egg-info/entry_points.txt
writing requirements to CAI.egg-info/requires.txt
writing top-level names to CAI.egg-info/top_level.txt
writing manifest file 'CAI.egg-info/SOURCES.txt'
reading manifest file 'CAI.egg-info/SOURCES.txt'
adding license file 'LICENSE.txt'
writing manifest file 'CAI.egg-info/SOURCES.txt'
Copying CAI.egg-info to
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.13/dist-packages/CAI-1.0.2.egg-info
Skipping SOURCES.txt
running install_scripts
Installing CAI script to /<<PKGBUILDDIR>>/debian/python3-cai/usr/bin
I: pybuild base:311: /usr/bin/python3 setup.py install --root
/<<PKGBUILDDIR>>/debian/python3-cai
/usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller:
setuptools.installer and fetch_build_eggs are deprecated.
!!
********************************************************************************
Requirements should be satisfied by a PEP 517 installer.
If you are using pip, you can try `pip install --use-pep517`.
********************************************************************************
!!
dist.fetch_build_eggs(dist.setup_requires)
/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning:
Unknown distribution option: 'tests_require'
warnings.warn(msg)
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66:
SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html
for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages
creating
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/cli.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI
creating
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/__pycache__
copying
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/__pycache__/__init__.cpython-312.pyc
->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/__pycache__
copying
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/__pycache__/CAI.cpython-312.pyc
->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/__init__.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_cai/build/CAI/CAI.py ->
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/cli.py
to cli.cpython-312.pyc
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/__init__.py
to __init__.cpython-312.pyc
byte-compiling
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI/CAI.py
to CAI.cpython-312.pyc
running install_egg_info
running egg_info
writing CAI.egg-info/PKG-INFO
writing dependency_links to CAI.egg-info/dependency_links.txt
writing entry points to CAI.egg-info/entry_points.txt
writing requirements to CAI.egg-info/requires.txt
writing top-level names to CAI.egg-info/top_level.txt
reading manifest file 'CAI.egg-info/SOURCES.txt'
adding license file 'LICENSE.txt'
writing manifest file 'CAI.egg-info/SOURCES.txt'
Copying CAI.egg-info to
/<<PKGBUILDDIR>>/debian/python3-cai/usr/lib/python3.12/dist-packages/CAI-1.0.2.egg-info
Skipping SOURCES.txt
running install_scripts
Installing CAI script to /<<PKGBUILDDIR>>/debian/python3-cai/usr/bin
debian/rules override_dh_installdocs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
PATH=/<<PKGBUILDDIR>>/debian/python3-cai/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PYTHONPATH=/<<PKGBUILDDIR>> python3 -m sphinx -N -bhtml docs build/html
Running Sphinx v8.1.3
WARNING: Invalid configuration value found: 'language = None'. Update your
configuration to a valid language code. Falling back to 'en' (English).
loading translations [en]... done
making output directory... done
WARNING: html_static_path entry '_static' does not exist
Converting `source_suffix = '.rst'` to `source_suffix = {'.rst':
'restructuredtext'}`.
ERROR: Invalid value `None` in intersphinx_mapping['https://docs.python.org/'].
Expected a two-element tuple or list.
Configuration error:
Invalid `intersphinx_mapping` configuration (1 error).
make[1]: *** [debian/rules:14: override_dh_installdocs] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:8: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202412/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
