Your message dated Sun, 12 Jan 2025 18:52:03 +0000
with message-id <[email protected]>
and subject line Bug#1091873: fixed in octave-statistics 1.7.0-3
has caused the Debian Bug report #1091873,
regarding octave-statistics: flaky autopkgtest: seems to hang and times out
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1091873: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1091873
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: octave-statistics
Version: 1.7.0-2
Severity: serious
User: [email protected]
Usertags: flaky
Dear maintainer(s),
I looked at the results of the autopkgtest of your package because it's
blocking gcc-14. I noticed that it regularly fails.
Because the unstable-to-testing migration software now blocks on
regressions in testing, flaky tests, i.e. tests that flip between
passing and failing without changes to the list of installed packages,
are causing people unrelated to your package to spend time on these
tests.
Don't hesitate to reach out if you need help and some more information
from our infrastructure.
Paul
https://ci.debian.net/packages/o/octave-statistics/testing/amd64/55343399/
1669s ***** test
1669s x = ones(4, 11);
1669s y = {"a"; "a"; "b"; "b"};
1669s k = 3;
1669s a = fitcknn (x, y, "NumNeighbors", k);
1669s partition = cvpartition (y, "LeaveOut");
1669s cvModel = ClassificationPartitionedModel (a, partition);
1669s [label, score, cost] = kfoldPredict (cvModel);
1669s assert (class(cvModel), "ClassificationPartitionedModel");
1669s assert ({cvModel.X, cvModel.Y}, {x, y});
1669s assert (cvModel.NumObservations, 4);
1669s assert (cvModel.ModelParameters.NumNeighbors, k);
1669s assert (cvModel.ModelParameters.NSMethod, "exhaustive");
1669s assert (cvModel.ModelParameters.Distance, "euclidean");
1669s assert (! cvModel.ModelParameters.Standardize);
1669s assert (label, {"b"; "b"; "a"; "a"});
1669s assert (score, [0.3333, 0.6667; 0.3333, 0.6667; 0.6667, 0.3333; ...
1669s 0.6667, 0.3333], 1e-4);
1669s assert (cost, [0.6667, 0.3333; 0.6667, 0.3333; 0.3333, 0.6667; ...
1669s 0.3333, 0.6667], 1e-4);
1669s ***** error<ClassificationPartitionedModel.kfoldPredict: 'Cost'
output is not supported for ClassificationSVM cross validated models.> ...
1669s [label, score, cost] = kfoldPredict (crossval (ClassificationSVM
(ones (40,2), randi ([1, 2], 40, 1))))
1669s ***** error<ClassificationPartitionedModel.kfoldPredict: 'Cost'
output is not supported for ClassificationNeuralNetwork cross validated
models.> ...
1669s [label, score, cost] = kfoldPredict (crossval
(ClassificationNeuralNetwork (ones (40,2), randi ([1, 2], 40, 1))))
10077s autopkgtest [14:05:12]: ERROR: timed out on command "su -s
/bin/bash debci -c set -e; exec
/tmp/autopkgtest-lxc.1blv5zzr/downtmp/wrapper.sh
--artifacts=/tmp/autopkgtest-lxc.1blv5zzr/downtmp/command1-artifacts
--chdir=/tmp/autopkgtest-lxc.1blv5zzr/downtmp/build.ddb/src
--env=DEB_BUILD_OPTIONS=parallel=64 --env=DEBIAN_FRONTEND=noninteractive
--env=LANG=C.UTF-8 --unset-env=LANGUAGE --unset-env=LC_ADDRESS
--unset-env=LC_ALL --unset-env=LC_COLLATE --unset-env=LC_CTYPE
--unset-env=LC_IDENTIFICATION --unset-env=LC_MEASUREMENT
--unset-env=LC_MESSAGES --unset-env=LC_MONETARY --unset-env=LC_NAME
--unset-env=LC_NUMERIC --unset-env=LC_PAPER --unset-env=LC_TELEPHONE
--unset-env=LC_TIME --script-pid-file=/tmp/autopkgtest_script_pid
--source-profile
--stderr=/tmp/autopkgtest-lxc.1blv5zzr/downtmp/command1-stderr
--stdout=/tmp/autopkgtest-lxc.1blv5zzr/downtmp/command1-stdout
--tmp=/tmp/autopkgtest-lxc.1blv5zzr/downtmp/autopkgtest_tmp -- bash -ec
'DH_OCTAVE_TEST_ENV="xvfb-run -a" /usr/bin/dh_octave_check
--use-installed-package'" (kind: test)
10078s autopkgtest [14:05:13]: test command1: -----------------------]
OpenPGP_signature.asc
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--- End Message ---
--- Begin Message ---
Source: octave-statistics
Source-Version: 1.7.0-3
Done: Sébastien Villemot <[email protected]>
We believe that the bug you reported is fixed in the latest version of
octave-statistics, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sébastien Villemot <[email protected]> (supplier of updated
octave-statistics package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sun, 12 Jan 2025 19:17:09 +0100
Source: octave-statistics
Architecture: source
Version: 1.7.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Octave Group <[email protected]>
Changed-By: Sébastien Villemot <[email protected]>
Closes: 1091873
Changes:
octave-statistics (1.7.0-3) unstable; urgency=medium
.
* test-ClassificationPartitionedModel.patch: update following upstream fix
* test-ClassificationPartitionedModel-2.patch: new patch.
Should fix random autopkgtest timeouts. (Closes: #1091873)
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