Your message dated Wed, 16 Apr 2025 12:11:45 +0100 with message-id <[email protected]> and subject line fixed in latest odc rebuild has caused the Debian Bug report #1103225, regarding ecmwflibs: FTBFS: ERROR: ecmwflibs (unittest.loader._FailedTest.ecmwflibs) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 1103225: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1103225 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: src:ecmwflibs Version: 2:0.6.3-2 Severity: serious Tags: ftbfs trixie sid Dear maintainer: During a rebuild of all packages in unstable, your package failed to build: -------------------------------------------------------------------------------- [...] debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/<<PKGBUILDDIR>>' rm -rf *.egg-info .eggs .pybuild build # clean up files we don't want to include find . -name .gitignore -exec rm {} \; make[1]: Leaving directory '/<<PKGBUILDDIR>>' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-ecmwflibs.substvars debian/files rm -fr -- debian/python3-ecmwflibs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.13 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs copying ecmwflibs/__main__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs copying ecmwflibs/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs running egg_info creating ecmwflibs.egg-info writing ecmwflibs.egg-info/PKG-INFO writing dependency_links to ecmwflibs.egg-info/dependency_links.txt writing requirements to ecmwflibs.egg-info/requires.txt writing top-level names to ecmwflibs.egg-info/top_level.txt writing manifest file 'ecmwflibs.egg-info/SOURCES.txt' reading manifest file 'ecmwflibs.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'NOTICE.md' writing manifest file 'ecmwflibs.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'ecmwflibs.etc' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'ecmwflibs.etc' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'ecmwflibs.etc' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'ecmwflibs.etc' to be distributed and are already explicitly excluding 'ecmwflibs.etc' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying ecmwflibs/_ecmwflibs.cc -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs/etc copying ecmwflibs/etc/README -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs/etc running build_ext building 'ecmwflibs._ecmwflibs' extension creating build/temp.linux-x86_64-cpython-313/ecmwflibs x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/include/magics -I/usr/include/python3.13 -c ecmwflibs/_ecmwflibs.cc -o build/temp.linux-x86_64-cpython-313/ecmwflibs/_ecmwflibs.o In file included from ecmwflibs/_ecmwflibs.cc:5: /usr/include/magics/magics_config.h:10:9: warning: "HAVE_INTTYPES_H" redefined 10 | #define HAVE_INTTYPES_H | ^~~~~~~~~~~~~~~ In file included from /usr/include/python3.13/pyconfig.h:3, from /usr/include/python3.13/Python.h:14, from ecmwflibs/_ecmwflibs.cc:2: /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:635:9: note: this is the location of the previous definition 635 | #define HAVE_INTTYPES_H 1 | ^~~~~~~~~~~~~~~ /usr/include/magics/magics_config.h:37:9: warning: "HAVE_STDINT_H" redefined 37 | #define HAVE_STDINT_H | ^~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1250:9: note: this is the location of the previous definition 1250 | #define HAVE_STDINT_H 1 | ^~~~~~~~~~~~~ /usr/include/magics/magics_config.h:40:9: warning: "HAVE_STDLIB_H" redefined 40 | #define HAVE_STDLIB_H | ^~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1256:9: note: this is the location of the previous definition 1256 | #define HAVE_STDLIB_H 1 | ^~~~~~~~~~~~~ /usr/include/magics/magics_config.h:43:9: warning: "HAVE_STRINGS_H" redefined 43 | #define HAVE_STRINGS_H | ^~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1265:9: note: this is the location of the previous definition 1265 | #define HAVE_STRINGS_H 1 | ^~~~~~~~~~~~~~ /usr/include/magics/magics_config.h:46:9: warning: "HAVE_STRING_H" redefined 46 | #define HAVE_STRING_H | ^~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1268:9: note: this is the location of the previous definition 1268 | #define HAVE_STRING_H 1 | ^~~~~~~~~~~~~ /usr/include/magics/magics_config.h:49:9: warning: "HAVE_SYS_STAT_H" redefined 49 | #define HAVE_SYS_STAT_H | ^~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1417:9: note: this is the location of the previous definition 1417 | #define HAVE_SYS_STAT_H 1 | ^~~~~~~~~~~~~~~ /usr/include/magics/magics_config.h:52:9: warning: "HAVE_SYS_TYPES_H" redefined 52 | #define HAVE_SYS_TYPES_H | ^~~~~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1441:9: note: this is the location of the previous definition 1441 | #define HAVE_SYS_TYPES_H 1 | ^~~~~~~~~~~~~~~~ /usr/include/magics/magics_config.h:55:9: warning: "HAVE_UNISTD_H" redefined 55 | #define HAVE_UNISTD_H | ^~~~~~~~~~~~~ /usr/include/x86_64-linux-gnu/python3.13/pyconfig.h:1512:9: note: this is the location of the previous definition 1512 | #define HAVE_UNISTD_H 1 | ^~~~~~~~~~~~~ x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR [too-long-redacted] inux-gnu.so -Wl,-rpath,/usr/lib dh_auto_test -O--buildsystem=pybuild pybuild --test -i python{version} -p 3.13 I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build; python3.13 -m unittest discover -v /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs/__init__.py:82: UserWarning: /lib/x86_64-linux-gnu/libodccore.so.0d: undefined symbol: _ZN5eckit14NotImplementedC1ERKNS_12CodeLocationE warnings.warn(str(e)) ecmwflibs (unittest.loader._FailedTest.ecmwflibs) ... ERROR ====================================================================== ERROR: ecmwflibs (unittest.loader._FailedTest.ecmwflibs) ---------------------------------------------------------------------- ImportError: Failed to import test module: ecmwflibs Traceback (most recent call last): File "/usr/lib/python3.13/unittest/loader.py", line 429, in _find_test_path package = self._get_module_from_name(name) File "/usr/lib/python3.13/unittest/loader.py", line 339, in _get_module_from_name __import__(name) ~~~~~~~~~~^^^^^^ File "/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build/ecmwflibs/__init__.py", line 79, in <module> from ._ecmwflibs import versions as _versions ImportError: /lib/x86_64-linux-gnu/libodccore.so.0d: undefined symbol: _ZN5eckit14NotImplementedC1ERKNS_12CodeLocationE ---------------------------------------------------------------------- Ran 1 test in 0.000s FAILED (errors=1) E: pybuild pybuild:389: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_ecmwflibs/build; python3.13 -m unittest discover -v rm -fr -- /tmp/dh-xdg-rundir-9keinmmd dh_auto_test: error: pybuild --test -i python{version} -p 3.13 returned exit code 13 make: *** [debian/rules:10: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 -------------------------------------------------------------------------------- The above is just how the build ends and not necessarily the most relevant part. If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202504/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you could not reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:ecmwflibs, so that this is still visible in the BTS web page for this package. Thanks.
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--- Begin Message ---Hi This is fixed in the latest upload (rebuild of ODC. dependency of ecmwflibs) Closing Alastair -- Alastair McKinstry, GPG: 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 e: [email protected], im: @alastair:mckinstry.ie https://mastodon.ie/@amckinstry
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