Your message dated Mon, 18 May 2026 16:48:57 +0000
with message-id <[email protected]>
and subject line Bug#1131077: fixed in python-pomegranate 1.1.0-1
has caused the Debian Bug report #1131077,
regarding python-pomegranate: autopkgtest regression with NumPy 2.4
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
1131077: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1131077
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: python-pomegranate
Version: 0.15.0-2
Severity: important
User: [email protected]
Usertags: numpy2.4
Dear maintainer,
According to https://ci.debian.net data, your package python-pomegranate has an
autopkgtest regression with numpy.
The following architectures failed: amd64, arm64.
Hopefully relevant excerpt from
https://ci.debian.net/packages/p/python-pomegranate/unstable/amd64/69506966/
follows:
109s =================================== FAILURES
===================================
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s ValueError: cannot resize an array that references or is referenced
109s if self.status == TASK_ERROR:
109s E ValueError: cannot resize an array that references or is
referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s ValueError: cannot resize an array that references or is referenced
109s if self.status == TASK_ERROR:
109s E ValueError: cannot resize an array that references or is
referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s ValueError: cannot resize an array that references or is referenced
109s if self.status == TASK_ERROR:
109s E ValueError: cannot resize an array that references or is
referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E TypeError: only 0-dimensional arrays can be converted to Python scalars
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s E ValueError: cannot resize an array that references or is referenced
109s E by another array in this way.
109s E Use the np.resize function or refcheck=False
109s FAILED tests/test_bayesian_network.py::test_guest_titanic - ValueError:
canno...
109s FAILED tests/test_bayesian_network.py::test_guest_monty - ValueError:
cannot ...
109s FAILED tests/test_bayesian_network.py::test_guest_with_monty - ValueError:
ca...
109s FAILED tests/test_bayesian_network.py::test_monty - ValueError: cannot
resize...
109s FAILED tests/test_bayesian_network.py::test_predict - ValueError: cannot
resi...
109s FAILED tests/test_bayesian_network.py::test_gibbs_sampling - ValueError:
cann...
109s FAILED tests/test_bayesian_network.py::test_predict_parallel - ValueError:
ca...
109s FAILED tests/test_bayesian_network.py::test_predict_datagenerator -
ValueErro...
109s FAILED tests/test_bayesian_network.py::test_numpy_predict - ValueError:
canno...
109s FAILED tests/test_bayesian_network.py::test_numpy_predict_parallel -
ValueErr...
109s FAILED tests/test_bayesian_network.py::test_numpy_predict_datagenerator -
Val...
109s FAILED tests/test_bayesian_network.py::test_single_dict_predict_proba -
Value...
109s FAILED tests/test_bayesian_network.py::test_single_dict_large_predict_proba
109s FAILED tests/test_bayesian_network.py::test_list_of_lists_predict_proba -
Val...
109s FAILED
tests/test_bayesian_network.py::test_list_of_lists_large_predict_proba
109s FAILED tests/test_bayesian_network.py::test_list_of_dicts_predict_proba -
Val...
109s FAILED
tests/test_bayesian_network.py::test_list_of_dicts_large_predict_proba
109s FAILED
tests/test_bayesian_network.py::test_list_of_dicts_predict_proba_parallel
109s FAILED tests/test_bayesian_network.py::test_io_predict - ValueError:
cannot r...
109s FAILED tests/test_custom_distributions.py::test_custom_normal_gmm_fit -
TypeE...
109s FAILED
tests/test_custom_distributions.py::test_custom_normal_gmm_from_samples
109s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_logp -
TypeErr...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_predict -
Type...
109s FAILED
tests/test_custom_distributions.py::test_custom_icd_gmm_predict_proba
109s FAILED
tests/test_custom_distributions.py::test_custom_icd_gmm_predict_log_proba
109s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_fit -
TypeErro...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_from_samples
109s FAILED tests/test_custom_distributions.py::test_custom_normal_nb_fit -
TypeEr...
109s FAILED
tests/test_custom_distributions.py::test_custom_normal_nb_from_samples
109s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_logp -
TypeErro...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_predict -
TypeE...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_predict_proba
109s FAILED
tests/test_custom_distributions.py::test_custom_icd_nb_predict_log_proba
109s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_fit -
TypeError...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_from_samples
- ...
109s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_logp -
Type...
109s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_predict
- T...
109s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_predict_proba
109s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_predict_log_proba
109s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_fit -
TypeE...
109s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
109s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_logp -
TypeErr...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_predict -
Type...
109s FAILED
tests/test_custom_distributions.py::test_custom_icd_hmm_predict_proba
109s FAILED
tests/test_custom_distributions.py::test_custom_icd_hmm_predict_log_proba
109s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_fit -
TypeErro...
109s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_from_samples
109s FAILED
tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_one_check_input
109s FAILED tests/test_markov_network.py::test_predict_int - ValueError: cannot
re...
109s FAILED tests/test_markov_network.py::test_predict_str - ValueError: cannot
re...
109s FAILED tests/test_markov_network.py::test_predict_bool - ValueError:
cannot r...
109s FAILED tests/test_markov_network.py::test_predict_mixed - ValueError:
cannot ...
109s ======================= 52 failed, 544 passed in 20.05s
========================
110s E: pybuild pybuild:485: test: plugin distutils failed with: exit code=1:
cd /tmp/autopkgtest-lxc.xx_g0fp0/downtmp/autopkgtest_tmp/build; python3.14 -m
pytest tests
123s =================================== FAILURES
===================================
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
123s E TypeError: only 0-dimensional arrays can be converted to Python scalars
124s E TypeError: only 0-dimensional arrays can be converted to Python scalars
124s E TypeError: only 0-dimensional arrays can be converted to Python scalars
124s FAILED tests/test_custom_distributions.py::test_custom_normal_gmm_fit -
TypeE...
124s FAILED
tests/test_custom_distributions.py::test_custom_normal_gmm_from_samples
124s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_logp -
TypeErr...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_predict -
Type...
124s FAILED
tests/test_custom_distributions.py::test_custom_icd_gmm_predict_proba
124s FAILED
tests/test_custom_distributions.py::test_custom_icd_gmm_predict_log_proba
124s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_fit -
TypeErro...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_gmm_from_samples
124s FAILED tests/test_custom_distributions.py::test_custom_normal_nb_fit -
TypeEr...
124s FAILED
tests/test_custom_distributions.py::test_custom_normal_nb_from_samples
124s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_logp -
TypeErro...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_predict -
TypeE...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_predict_proba
124s FAILED
tests/test_custom_distributions.py::test_custom_icd_nb_predict_log_proba
124s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_fit -
TypeError...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_nb_from_samples
- ...
124s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_logp -
Type...
124s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_predict
- T...
124s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_predict_proba
124s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_predict_log_proba
124s FAILED tests/test_custom_distributions.py::test_custom_normal_hmm_fit -
TypeE...
124s FAILED
tests/test_custom_distributions.py::test_custom_normal_hmm_from_samples
124s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_logp -
TypeErr...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_predict -
Type...
124s FAILED
tests/test_custom_distributions.py::test_custom_icd_hmm_predict_proba
124s FAILED
tests/test_custom_distributions.py::test_custom_icd_hmm_predict_log_proba
124s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_fit -
TypeErro...
124s FAILED tests/test_custom_distributions.py::test_custom_icd_hmm_from_samples
124s FAILED
tests/test_hmm.py::test_hmm_univariate_discrete_from_samples_one_check_input
124s ======================= 29 failed, 567 passed in 12.91s
========================
124s E: pybuild pybuild:485: test: plugin distutils failed with: exit code=1:
cd /tmp/autopkgtest-lxc.xx_g0fp0/downtmp/autopkgtest_tmp/build; python3.13 -m
pytest tests
124s pybuild-autopkgtest: error: pybuild --autopkgtest --test-pytest -i
python{version} -p "3.14 3.13" --parallel= returned exit code 13
124s pybuild-autopkgtest: error: /tmp/60fNO7B0j4/run pybuild-autopkgtest
returned exit code 2
125s pybuild-autopkgtest FAIL non-zero exit status 25
125s pybuild-autopkgtest FAIL non-zero exit status 25
--- End Message ---
--- Begin Message ---
Source: python-pomegranate
Source-Version: 1.1.0-1
Done: Michael R. Crusoe <[email protected]>
We believe that the bug you reported is fixed in the latest version of
python-pomegranate, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <[email protected]> (supplier of updated python-pomegranate
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 18 May 2026 18:23:19 +0200
Source: python-pomegranate
Architecture: source
Version: 1.1.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team <[email protected]>
Changed-By: Michael R. Crusoe <[email protected]>
Closes: 1131077
Changes:
python-pomegranate (1.1.0-1) unstable; urgency=medium
.
* d/watch: New version of cnvkit works with pomegranate v1.x. Switch
to Version 5 uscan syntax.
* New upstream version. Closes: #1131077
* Standards-Version: 4.7.4 (routine-update)
* debputy lint --auto-fix (routine-update)
* Refreshed patches, removing 4 that are no longer applicable given
the rewrite.
* d/control: adjust dependencies for the rewrite.
* Added patch for PyTorch 2.6+ support.
* d/control: only build for the default version of Python, to match pytorch.
* d/python-pomegranate-doc.docs: new source location for the
tutorials.
* d/control: sklearn is required for the doctests.
* d/rules: no verbose debhelper output needed.
* d/control: breaks older cnvkit.
* d/copyright: expat is expat.
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