Package: src:vienna-rna Version: 2.7.0+dfsg-2 Severity: serious Tags: ftbfs forky sid
Dear maintainer: During a rebuild of all packages in unstable, this package failed to build. Below you will find the last part of the build log (probably the most relevant part, but not necessarily). If required, the full build log is available here: https://people.debian.org/~sanvila/build-logs/202608/ About the archive rebuild: The build was made on virtual machines from AWS, using sbuild and a reduced chroot with only build-essential packages. If you cannot reproduce the bug please contact me privately, as I am willing to provide ssh access to a virtual machine where the bug is fully reproducible. If this is really a bug in one of the build-depends, please use reassign and add an affects on src:vienna-rna, so that this is still visible in the BTS web page for this package. Thanks. -------------------------------------------------------------------------------- [...] /bin/bash ../../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -std=c++17 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python3.14 -DVRNA_WITH_NAVIEW_LAYOUT -DVRNA_LOG_NO_DEBUG_RNALIB -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -flto=auto -ffat-lto-objects -fopenmp -pthread -Wno-unused-label -Wno-unused-variable -I/usr/include/json-c/ -I/usr/include/libsvm/ -c -o _RNA_la-RNA_wrap.lo `test -f 'RNA_wrap.cpp' || echo './'`RNA_wrap.cpp libtool: compile: x86_64-linux-gnu-g++ -std=c++17 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include/python3.14 -DVRNA_WITH_NAVIEW_LAYOUT -DVRNA_LOG_NO_DEBUG_RNALIB -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -flto=auto -ffat-lto-objects -fopenmp -pthread -Wno-unused-label -Wno-unused-variable -I/usr/include/json-c/ -I/usr/include/libsvm/ -c RNA_wrap.cpp -fPIC -DPIC -o .libs/_RNA_la-RNA_wrap.o RNA_wrap.cpp: In function 'void python_wrap_subopt_cb(const char*, float, void*)': RNA_wrap.cpp:14520:32: error: 'PyString_FromString' was not declared in this scope; did you mean 'PyLong_FromString'? 14520 | py_structure = (structure) ? PyString_FromString(structure) : Py_None; | ^~~~~~~~~~~~~~~~~~~ | PyLong_FromString RNA_wrap.cpp: In function 'void python_wrap_bs_cb(const char*, void*)': RNA_wrap.cpp:14605:32: error: 'PyString_FromString' was not declared in this scope; did you mean 'PyLong_FromString'? 14605 | py_structure = (structure) ? PyString_FromString(structure) : Py_None; | ^~~~~~~~~~~~~~~~~~~ | PyLong_FromString RNA_wrap.cpp: In function 'void python_wrap_mfe_window_cb(unsigned int, unsigned int, const char*, float, void*)': RNA_wrap.cpp:14706:19: error: 'PyString_FromString' was not declared in this scope; did you mean 'PyLong_FromString'? 14706 | py_structure = PyString_FromString(structure); | ^~~~~~~~~~~~~~~~~~~ | PyLong_FromString RNA_wrap.cpp: In function 'PyObject* _wrap_circalifold__SWIG_2(PyObject*, Py_ssize_t, PyObject**)': RNA_wrap.cpp:71854:19: error: 'PyString_AsString' was not declared in this scope 71854 | arg1[i] = PyString_AsString(PyUnicode_AsASCIIString(o)); | ^~~~~~~~~~~~~~~~~ RNA_wrap.cpp: In function 'PyObject* Swig_var_symbolset_get()': RNA_wrap.cpp:77322:13: error: 'SWIG_Python_str_FromChar' was not declared in this scope 77322 | pyobj = SWIG_Python_str_FromChar((const char *)symbolset); | ^~~~~~~~~~~~~~~~~~~~~~~~ RNA_wrap.cpp: In function 'PyObject* _wrap_extract_record_rest_structure(PyObject*, PyObject*, PyObject*)': RNA_wrap.cpp:78847:19: error: 'PyString_AsString' was not declared in this scope 78847 | arg1[i] = PyString_AsString(PyUnicode_AsASCIIString(o)); | ^~~~~~~~~~~~~~~~~ RNA_wrap.cpp: In function 'PyObject* _wrap_read_record(PyObject*, PyObject*, PyObject*)': RNA_wrap.cpp:78920:19: error: 'PyString_AsString' was not declared in this scope 78920 | arg1[i] = PyString_AsString(PyUnicode_AsASCIIString(o)); | ^~~~~~~~~~~~~~~~~ RNA_wrap.cpp:78942:19: error: 'PyString_AsString' was not declared in this scope 78942 | arg2[i] = PyString_AsString(PyUnicode_AsASCIIString(o)); | ^~~~~~~~~~~~~~~~~ RNA_wrap.cpp: In function 'PyObject* _wrap_get_multi_input_line(PyObject*, PyObject*, PyObject*)': RNA_wrap.cpp:79015:19: error: 'PyString_AsString' was not declared in this scope 79015 | arg1[i] = PyString_AsString(PyUnicode_AsASCIIString(o)); | ^~~~~~~~~~~~~~~~~ make[5]: *** [Makefile:870: _RNA_la-RNA_wrap.lo] Error 1 make[5]: Leaving directory '/<<PKGBUILDDIR>>/interfaces/Python' make[4]: *** [Makefile:684: all-recursive] Error 1 make[4]: Leaving directory '/<<PKGBUILDDIR>>/interfaces' make[3]: *** [Makefile:745: all-recursive] Error 1 make[3]: Leaving directory '/<<PKGBUILDDIR>>' make[2]: *** [Makefile:626: all] Error 2 make[2]: Leaving directory '/<<PKGBUILDDIR>>' dh_auto_build: error: make -j1 returned exit code 2 make[1]: *** [debian/rules:25: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<<PKGBUILDDIR>>' make: *** [debian/rules:5: binary] Error 2 dpkg-buildpackage: error: debian/rules binary subprocess failed with exit status 2 --------------------------------------------------------------------------------
