Your message dated Thu, 24 Sep 2026 10:04:50 +0000
with message-id <[email protected]>
and subject line Bug#1148456: fixed in python-pybedtools 0.12.1-1
has caused the Debian Bug report #1148456,
regarding FTBFS: build: plugin pyproject failed with: exit code=1
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
1148456: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1148456
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: python-pybedtools
Version: 0.10.0-6
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Hi,
python-pybedtools currently FTBFS in unstable:
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build"
module
I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation
--wheel --outdir
/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
* Building wheel...
pybedtools uses setuptools (https://packaging.python.org/installing/) for
installation but setuptools was not found
TIP pass --env-dir and --sdist-extract-dir to keep the build environment and
sources, then see
https://build.pypa.io/en/stable/how-to/troubleshooting.html#debug-a-failed-build
for help debugging a failed build
ERROR Backend subprocess exited when trying to invoke build_wheel
E: pybuild pybuild:485: build: plugin pyproject failed with: exit code=1:
python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir
/build/reproducible-path/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
dh_auto_build: error: pybuild --build -i python{version} -p 3.14 --parallel=12
returned exit code 13
make: *** [debian/rules:20: binary] Error 25
Full build log is enclosed.
Best wishes,
- --
Pierre
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dpkg-buildpackage -us -uc -ui
dpkg-buildpackage: info: source package python-pybedtools
dpkg-buildpackage: info: source version 0.10.0-6
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Santiago Vila <[email protected]>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
dpkg-source: info: using options from
/home/pgt/python-pybedtools-0.10.0/debian/source/options:
--extend-diff-ignore=(pybedtools/version.py|docs/source/pybedtools.featurefuncs.*.rst)
debian/rules clean
dh clean --with python3,sphinxdoc --buildsystem=pybuild
dh_auto_clean -O--buildsystem=pybuild
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
dpkg-source -b .
dpkg-source: info: using options from
/home/pgt/python-pybedtools-0.10.0/debian/source/options:
--extend-diff-ignore=(pybedtools/version.py|docs/source/pybedtools.featurefuncs.*.rst)
dpkg-source: info: using source format '3.0 (quilt)'
dpkg-source: info: building python-pybedtools using existing
../python-pybedtools_0.10.0.orig.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: warning: ignoring deletion of file
docs/source/autodocs/pybedtools.contrib.plotting.Track.rst, use
--include-removal to override
dpkg-source: info: building python-pybedtools in
../python-pybedtools_0.10.0-6.debian.tar.xz
dpkg-source: info: building python-pybedtools in
../python-pybedtools_0.10.0-6.dsc
debian/rules binary
dh binary --with python3,sphinxdoc --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:142: Building wheel for python3.14 with "build"
module
I: pybuild base:385: python3.14 -m build --skip-dependency-check --no-isolation
--wheel --outdir
/home/pgt/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
* Building wheel...
pybedtools uses setuptools (https://packaging.python.org/installing/) for
installation but setuptools was not found
TIP pass --env-dir and --sdist-extract-dir to keep the build environment and
sources, then see
https://build.pypa.io/en/stable/how-to/troubleshooting.html#debug-a-failed-build
for help debugging a failed build
ERROR Backend subprocess exited when trying to invoke build_wheel
E: pybuild pybuild:485: build: plugin pyproject failed with: exit code=1:
python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir
/home/pgt/python-pybedtools-0.10.0/.pybuild/cpython3_3.14_pybedtools
dh_auto_build: error: pybuild --build -i python{version} -p 3.14 --parallel=4
returned exit code 13
make: *** [debian/rules:20: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit
status 2
--- End Message ---
--- Begin Message ---
Source: python-pybedtools
Source-Version: 0.12.1-1
Done: Andreas Tille <[email protected]>
We believe that the bug you reported is fixed in the latest version of
python-pybedtools, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated python-pybedtools package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 24 Sep 2026 11:35:40 +0200
Source: python-pybedtools
Architecture: source
Version: 0.12.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Closes: 1148456
Changes:
python-pybedtools (0.12.1-1) unstable; urgency=medium
.
* Team upload.
* New upstream version
Closes: #1148456
* d/watch:
- Version=5
- Use tags
* Standards-Version: 4.7.4 (routine-update)
* Reflow Uploaders field (cme)
* Reformat the Last-Update date as ISO YYYY-MM-DD.
* Use dh-sequence-* build dependencies instead of dh --with: sphinxdoc.
* d/copyright: pybedtools/include have changed license to MIT
* Add lrc.config
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