Author: plessy
Date: 2008-10-20 15:08:40 +0000 (Mon, 20 Oct 2008)
New Revision: 2576
Added:
trunk/packages/seaview/trunk/debian/references
trunk/packages/seaview/trunk/debian/seaview.doc-base.reference
Modified:
trunk/packages/seaview/trunk/debian/rules
Log:
Experimenting the handling of BibTex references.
Added: trunk/packages/seaview/trunk/debian/references
===================================================================
--- trunk/packages/seaview/trunk/debian/references
(rev 0)
+++ trunk/packages/seaview/trunk/debian/references 2008-10-20 15:08:40 UTC
(rev 2576)
@@ -0,0 +1,19 @@
+
+
+
+
[EMAIL PROTECTED],
+author = {Galtier, N. and Gouy, M. and Gautier, C.},
+title = {{SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and
molecular phylogeny}},
+journal = {Comput. Appl. Biosci.},
+volume = {12},
+number = {6},
+pages = {543-548},
+doi = {10.1093/bioinformatics/12.6.543},
+year = {1996},
+abstract = {SEA VIEW and PHYLO_WIN are two graphic tools for X Windows-Unix
computers dedicated to sequence alignment and molecular phylogenetics. SEA VIEW
is a sequence alignment editor allowing manual or automatic alignment through
an interface with CLUSTALW program. Alignment of large sequences with extensive
length differences is made easier by a dot-plot-based routine. The PHYLO_WIN
program allows phylogenetic tree building according to most usual methods
(neighbor joining with numerous distance estimates, maximum parsimony, maximum
likelihood), and a bootstrap analysis with any of them. Reconstructed trees can
be drawn, edited, printed, stored, evaluated according to numerous criteria.
Taxonomic species groups and sets of conserved regions can be defined by mouse
and stored into sequence files, thus avoiding multiple data files. Both tools
are entirely mouse driven. On-line help makes them easy to use. They are freely
available by anonymous ftp at biom3.univ-lyonl. fr/pub/ mol_phylogeny or
http://acnuc.univ-lyonl.fr, or by e-mail to [EMAIL PROTECTED]
+},
+URL = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/12/6/543},
+eprint = {http://bioinformatics.oxfordjournals.org/cgi/reprint/12/6/543.pdf}
+}
+
Property changes on: trunk/packages/seaview/trunk/debian/references
___________________________________________________________________
Name: svn:mergeinfo
+
Modified: trunk/packages/seaview/trunk/debian/rules
===================================================================
--- trunk/packages/seaview/trunk/debian/rules 2008-10-15 21:27:45 UTC (rev
2575)
+++ trunk/packages/seaview/trunk/debian/rules 2008-10-20 15:08:40 UTC (rev
2576)
@@ -49,7 +49,7 @@
dh_testdir
dh_testroot
dh_installchangelogs
- dh_installdocs
+ dh_installdocs debian/references
dh_installexamples debian/examples/* protein.mase
dh_installmenu
dh_desktop
Added: trunk/packages/seaview/trunk/debian/seaview.doc-base.reference
===================================================================
--- trunk/packages/seaview/trunk/debian/seaview.doc-base.reference
(rev 0)
+++ trunk/packages/seaview/trunk/debian/seaview.doc-base.reference
2008-10-20 15:08:40 UTC (rev 2576)
@@ -0,0 +1,6 @@
+Document: seaview-reference
+Title: Reference for SeaView
+Section: Bibliography
+
+Format: Text
+Files: /usr/share/doc/seaview/references
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