Author: smoe-guest
Date: 2008-11-09 15:17:32 +0000 (Sun, 09 Nov 2008)
New Revision: 2639
Modified:
trunk/packages/mgltools/BUILD
trunk/packages/mgltools/autodocktools/trunk/debian/changelog
trunk/packages/mgltools/autodocktools/trunk/debian/control
trunk/packages/mgltools/bhtree/trunk/debian/changelog
trunk/packages/mgltools/bhtree/trunk/debian/control
trunk/packages/mgltools/cmolkit/trunk/debian/changelog
trunk/packages/mgltools/dejavu/trunk/debian/changelog
trunk/packages/mgltools/dejavu/trunk/debian/control
trunk/packages/mgltools/geomutils/trunk/debian/changelog
trunk/packages/mgltools/gle/trunk/debian/changelog
trunk/packages/mgltools/gle/trunk/debian/control
trunk/packages/mgltools/mglutil/trunk/debian/changelog
trunk/packages/mgltools/mglutil/trunk/debian/control
trunk/packages/mgltools/molkit/trunk/debian/changelog
trunk/packages/mgltools/molkit/trunk/debian/control
trunk/packages/mgltools/mslib/trunk/debian/changelog
trunk/packages/mgltools/networkeditor/trunk/debian/changelog
trunk/packages/mgltools/opengltk/trunk/debian/changelog
trunk/packages/mgltools/opengltk/trunk/debian/control
trunk/packages/mgltools/pmv/trunk/debian/changelog
trunk/packages/mgltools/pyautodock/trunk/debian/changelog
trunk/packages/mgltools/pyautodock/trunk/debian/control
trunk/packages/mgltools/pyautodock/trunk/debian/copyright
trunk/packages/mgltools/pybabel/trunk/debian/changelog
trunk/packages/mgltools/pyglf/trunk/debian/changelog
trunk/packages/mgltools/pyglf/trunk/debian/control
trunk/packages/mgltools/qslimlib/trunk/debian/changelog
trunk/packages/mgltools/qslimlib/trunk/debian/control
trunk/packages/mgltools/scenario/trunk/debian/changelog
trunk/packages/mgltools/sff/trunk/debian/changelog
trunk/packages/mgltools/sff/trunk/debian/control
trunk/packages/mgltools/support/trunk/debian/changelog
trunk/packages/mgltools/symserv/trunk/debian/changelog
trunk/packages/mgltools/utpackages/trunk/debian/changelog
trunk/packages/mgltools/utpackages/trunk/debian/control
trunk/packages/mgltools/viewerframework/trunk/debian/changelog
trunk/packages/mgltools/vision/trunk/debian/changelog
trunk/packages/mgltools/volume/trunk/debian/changelog
Log:
* new upstream version retrieved from CVS
* improved build dependencies
* improved BUILD instructions
Modified: trunk/packages/mgltools/BUILD
===================================================================
--- trunk/packages/mgltools/BUILD 2008-11-09 15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/BUILD 2008-11-09 15:17:32 UTC (rev 2639)
@@ -26,8 +26,9 @@
---------------------------------
The sources are made available on mgltools.scripps.edu. When deciding to
-download the latest from CVS, then perform as described here. Create a
-new directory, I used "mgltools-cvs" and cd to it:
+download the latest from CVS, then perform as described here. If you
+have not previously performed the checkout, then create a new directory
+(I used "mgltools-cvs") and cd to it:
[ -d mgltools ] || mkdir mgltools-cvs
cd mgltools-cvs
@@ -39,22 +40,33 @@
cvs -d:pserver:[EMAIL PROTECTED]:/opt/cvs login
just give an empty password and continue with the download of some sort of a
-metapackage
+metapackage ... if you have not perform this checkout before in this folder:
+ # perform only if previous checkouts are no longer available.
cvs -z3 -d:pserver:[EMAIL PROTECTED]:/opt/cvs co MGLPACKSDIST
-Should you find packages to remain missing, then write a report to the
-developers and download the missing packages separatedly like this:
+Otherwise, if you have an older version checked out already,
+just change to all of the directories and run the "cvs -z3 update":
- #no longer required for 1.5.1 to download separately
+ for i in *; do echo $i; (cd $i && cvs -z3 update); done
+
+Should you later when performing the Debian packaging find Python libraries to
+remain missing, then write a report to the developers and download the missing
+packages separatedly like this:
+
+ #no longer required for 1.5.2 to download separately
#cvs -z3 -d:pserver:[EMAIL PROTECTED]:/opt/cvs co SupportDist
Sadly, the names of the directories are invariantly set to a name that
does not appeal too much to us since they all end on "DIST". These should
-be renamed.
+be renamed. Again, perform this only when first retrieving data from the
+CVS.
+ # Chose the previous version instead of 'DIST'
+ # if the folder contains previously downloaded
+ # directories.
PREVDIST=DIST
- VERSIONNAME=1.5.1.cvs.`date +"%Y%m%d" | tr -d '\n'`
+ VERSIONNAME=1.5.2.cvs.`date +"%Y%m%d" | tr -d '\n'`
NEWDIST=-$VERSIONNAME
for i in *$PREVDIST
do
@@ -78,46 +90,63 @@
The tarballs should be made accessible for svn-buildpackage to be
found. The file .svn/deb-layout may be used to specify that location
-with the origDir variable. Alternatively, one can
+with the origDir variable. Alternatively, one can link or move the
+files to their new destination.
[ -d ../tarballs ] || mkdir ../tarballs
- ln *.tar.gz ../tarballs
+ mv *.tar.gz ../tarballs
Now, to have these tarballs found, the version in the 'debian/changelog'
files need to match. From debian-med/trunk/packages/mgltools execute
the following lines to add the new version to the changelogs
- for i in */trunk/debian; do
- d=`dirname $i`
- (cd $d && [EMAIL PROTECTED] debchange --preserve --newversion
$VERSIONNAME "New upstream version.")
- done
+ if [ -z "$VERSIONNAME" ]; then
+ echo "Please specify the new version first."
+ else
+ for i in */trunk/debian; do
+ d=`dirname $i`
+ (cd $d && \
+ [EMAIL PROTECTED] debchange --preserve \
+ --newversion ${VERSIONNAME}-1 "New upstream version.")
+ done
+ fi
+In the not so unlikely event that you want to control
+or manually amend the version description, please consider something
+alike
+
+ if [ -z "$EDITOR" ]; then
+ vi */trunk/debian/changelog
+ else
+ $EDITOR */trunk/debian/changelog
+ fi
+
Now, there is a build-order to get all the packages built and installed
without broken dependencies. The installation is not required for the
building, though. Try the following:
+ for p in \
+ support \
+ symserv \
+ pybabel \
+ sff \
+ mglutil \
+ geomutils \
+ volume \
+ qslimlib \
+ utpackages \
+ bhtree \
+ opengltk \
+ dejavu \
+ pmv \
+ gle \
+ viewerframework \
+ pyautodock \
+ autodocktools \
+ ; do
+ (cd $p/trunk && svn-b && sudo dpkg -i
../../build-area/mgltools-$p_$VERSIONNAME*.deb)
+ done
- for p in \
- support \
- symserv \
- pybabel \
- sff \
- mglutil \
- geomutils \
- volume \
- qslimlib \
- utpackages \
- bhtree \
- opengltk \
- dejavu \
- pmv \
- gle \
- viewerframework \
- autodocktools \
- ; do
- (cd $p/trunk && svn-b && sudo dpkg -i
../../build-area/mgltools-$p_$VERSIONNAME*.deb)
- done
-
The relative path of the build-area may differ on your system. It can
be set in .svn/deb-layout as buildArea=../../build-area
@@ -143,7 +172,7 @@
# specify version for what you are packaging
# (these instructions are possibly outdated :/ )
-VERSION=1.5.1
+VERSION=1.5.2
# Stay in the current directory and download the upstream
# source code ... or move or symbolically link that file to this
Modified: trunk/packages/mgltools/autodocktools/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/autodocktools/trunk/debian/changelog
2008-11-09 15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/autodocktools/trunk/debian/changelog
2008-11-09 15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+autodocktools (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:28 +0100
+
autodocktools (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release (Closes: #458811).
Modified: trunk/packages/mgltools/autodocktools/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/autodocktools/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/autodocktools/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -16,6 +16,7 @@
XB-Python-Version: ${python:Versions}
Architecture: all
Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, mgltools-pmv,
mgltools-molkit, mgltools-volume, mgltools-support, python-imaging-tk,
mgltools-viewerframework
+Recommends: mgltools-pyautodock
Suggests: autodock
Description: GUI to help set up, launch and analyze AutoDock dockings
This package is part of the mgltools set of Python libraries which
Modified: trunk/packages/mgltools/bhtree/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/bhtree/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/bhtree/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-bhtree (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:29 +0100
+
mgltools-bhtree (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/bhtree/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/bhtree/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/bhtree/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/bhtree/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/cmolkit/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/cmolkit/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/cmolkit/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-cmolkit (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:30 +0100
+
mgltools-cmolkit (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/dejavu/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/dejavu/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/dejavu/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-dejavu (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:30 +0100
+
mgltools-dejavu (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/dejavu/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/dejavu/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/dejavu/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, mesa-common-dev, x11proto-core-dev, libx11-dev,
python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/dejavu/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/geomutils/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/geomutils/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/geomutils/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-geomutils (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:31 +0100
+
mgltools-geomutils (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/gle/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/gle/trunk/debian/changelog 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/gle/trunk/debian/changelog 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -1,3 +1,9 @@
+mgltools-gle (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:32 +0100
+
mgltools-gle (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/gle/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/gle/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/gle/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), swig (>= 1.3.20), python2.5-dev, python-numpy, libglu1-mesa-dev
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), swig (>= 1.3.20), python2.5-dev, python-numpy, libglu1-mesa-dev,
mesa-common-dev
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/gle/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/mglutil/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/mglutil/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/mglutil/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-mglutil (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:32 +0100
+
mgltools-mglutil (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/mglutil/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/mglutil/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/mglutil/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -16,7 +16,7 @@
XB-Python-Version: ${python:Versions}
Architecture: all
Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, mgltools-sff,
python-pmw
-Recommends: qhull
+Recommends: qhull-bin
Suggests: tcsh
Description: Molecular Graphics Laboratory utility collection
This package is part of the mgltools set of Python libraries which
Modified: trunk/packages/mgltools/molkit/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/molkit/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/molkit/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-molkit (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:33 +0100
+
mgltools-molkit (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/molkit/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/molkit/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/molkit/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/molkit/trunk/?rev=0&sc=0
@@ -15,7 +15,7 @@
Package: mgltools-molkit
XB-Python-Version: ${python:Versions}
Architecture: all
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends},
mgltools-pybabel, mgltools-dejavu, mgltools-bhtree, mgltools-sff
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends},
mgltools-pybabel, mgltools-dejavu, mgltools-bhtree, mgltools-sff, python-numpy
Suggests: pdb2pqr
Description: Python classes to read and manipulate molecules
This package is part of the mgltools set of Python libraries which
Modified: trunk/packages/mgltools/mslib/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/mslib/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/mslib/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-mslib (1.5.2.cvs.20081109-1) UNRELEASED; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:34 +0100
+
mgltools-mslib (1.5.2.cvs.20080731-1) UNRELEASED; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/networkeditor/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/networkeditor/trunk/debian/changelog
2008-11-09 15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/networkeditor/trunk/debian/changelog
2008-11-09 15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-networkeditor (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:34 +0100
+
mgltools-networkeditor (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/opengltk/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/opengltk/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/opengltk/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-opengltk (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:35 +0100
+
mgltools-opengltk (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/opengltk/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/opengltk/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/opengltk/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -14,7 +14,7 @@
XB-Python-Version: ${python:Versions}
Provides: ${python:Provides}
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, libglu1-mesa,
tk, python-numpy
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, libglu1-mesa,
tk, python-numpy, mgltools-gle
Description: opengltk python extension
The library is needed by mgltools-autodocktools at runtime. It contains
the interface for building OpenGL python extensions with the python
Modified: trunk/packages/mgltools/pmv/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/pmv/trunk/debian/changelog 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/pmv/trunk/debian/changelog 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -1,3 +1,9 @@
+mgltools-pmv (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:35 +0100
+
mgltools-pmv (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/pyautodock/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/pyautodock/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/pyautodock/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-pyautodock (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:36 +0100
+
mgltools-pyautodock (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/pyautodock/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/pyautodock/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/pyautodock/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -15,12 +15,15 @@
Package: mgltools-pyautodock
XB-Python-Version: ${python:Versions}
Architecture: all
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, python-numpy,
mgltools-molkit
Suggests: autodock
Description: Python implementation of autodock
This package is part of the mgltools set of Python libraries which
provide an infrastructure for the analysis of protein structures and
- their docking of chemical compounds.
+ their docking of chemical compounds. This package provides a python
+ implementation of the autodock3 scoring function and of the new
+ autodock4 scoring function. Also it includes a python implementation
+ of AutoGrid.
.
AutoDock is a well established package for the automated screening of
libraries of formal representation of chemical compounds that putatively
Modified: trunk/packages/mgltools/pyautodock/trunk/debian/copyright
===================================================================
--- trunk/packages/mgltools/pyautodock/trunk/debian/copyright 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/pyautodock/trunk/debian/copyright 2008-11-09
15:17:32 UTC (rev 2639)
@@ -16,21 +16,10 @@
with contributions by
+ William Lindstrom
Ruth Huey <[EMAIL PROTECTED]>
Alex Gillet <[EMAIL PROTECTED]>
Guillaume Vareille <[EMAIL PROTECTED]>
- William Lindstrom
- Garrett M. Morris <[EMAIL PROTECTED]>
- David S. Goodsell
- Arthur J. Olson
- Sargis Dallakyan <[EMAIL PROTECTED]>
- Rodney Harris
- Konrad Hinsen <[EMAIL PROTECTED]>
- John E. Grayson
- Sowjanya Karnati
- Sandro Cosconati
- Daniel Stoffler <[EMAIL PROTECTED]>
- Michael F. Sanner <[EMAIL PROTECTED]>
Copyright:
Modified: trunk/packages/mgltools/pybabel/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/pybabel/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/pybabel/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-pybabel (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:37 +0100
+
mgltools-pybabel (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/pyglf/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/pyglf/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/pyglf/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-pyglf (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:38 +0100
+
mgltools-pyglf (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/pyglf/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/pyglf/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/pyglf/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, libxi-dev, swig, libglu1-mesa-dev, libxmu-dev
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, libxi-dev, swig, libglu1-mesa-dev, libxmu-dev,
mesa-common-dev, libglut3-dev, python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/pyglf/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/qslimlib/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/qslimlib/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/qslimlib/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-qslimlib (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:38 +0100
+
mgltools-qslimlib (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/qslimlib/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/qslimlib/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/qslimlib/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig (>= 1.3.20)
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig (>= 1.3.20), mesa-common-dev, libglu1-mesa-dev,
python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/qslimlib/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/scenario/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/scenario/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/scenario/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-scenario (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:39 +0100
+
mgltools-scenario (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/sff/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/sff/trunk/debian/changelog 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/sff/trunk/debian/changelog 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -1,3 +1,9 @@
+mgltools-sff (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:39 +0100
+
mgltools-sff (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/sff/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/sff/trunk/debian/control 2008-11-09 15:08:38 UTC
(rev 2638)
+++ trunk/packages/mgltools/sff/trunk/debian/control 2008-11-09 15:17:32 UTC
(rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig (>= 1.3.20), python-numpy
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig (>= 1.3.20), python-numpy, mgltools-bhtree
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/sff/trunk/?rev=0&sc=0
@@ -15,7 +15,7 @@
Package: mgltools-sff
XB-Python-Version: ${python:Versions}
Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, python-numpy
+Depends: ${shlibs:Depends}, ${misc:Depends}, ${python:Depends}, python-numpy,
mgltools-bhtree
Description: Simple Force Field for Python
This package is part of the mgltools set of Python libraries which
provide an infrastructure for the analysis of protein structures and
Modified: trunk/packages/mgltools/support/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/support/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/support/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-support (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:40 +0100
+
mgltools-support (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/symserv/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/symserv/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/symserv/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-symserv (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:40 +0100
+
mgltools-symserv (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/utpackages/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/utpackages/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/utpackages/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-utpackages (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:41 +0100
+
mgltools-utpackages (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/utpackages/trunk/debian/control
===================================================================
--- trunk/packages/mgltools/utpackages/trunk/debian/control 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/utpackages/trunk/debian/control 2008-11-09
15:17:32 UTC (rev 2639)
@@ -5,7 +5,7 @@
DM-Upload-Allowed: yes
XS-Autobuild: yes
Uploaders: Steffen Moeller <[EMAIL PROTECTED]>, Sargis Dallakyan <[EMAIL
PROTECTED]>
-Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig
+Build-Depends: debhelper (>= 5.0.38), python-central (>= 0.5.6), cdbs (>=
0.4.49), python2.5-dev, swig, mesa-common-dev, libglu1-mesa-dev, libglut3-dev,
python-numpy
Standards-Version: 3.8.0
XS-Python-Version: 2.5
Vcs-Browser:
http://svn.debian.org/wsvn/debian-med/trunk/packages/mgltools/pybabel/trunk/?rev=0&sc=0
Modified: trunk/packages/mgltools/viewerframework/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/viewerframework/trunk/debian/changelog
2008-11-09 15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/viewerframework/trunk/debian/changelog
2008-11-09 15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-viewerframework (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:42 +0100
+
mgltools-viewerframework (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/vision/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/vision/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/vision/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-vision (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:42 +0100
+
mgltools-vision (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
Modified: trunk/packages/mgltools/volume/trunk/debian/changelog
===================================================================
--- trunk/packages/mgltools/volume/trunk/debian/changelog 2008-11-09
15:08:38 UTC (rev 2638)
+++ trunk/packages/mgltools/volume/trunk/debian/changelog 2008-11-09
15:17:32 UTC (rev 2639)
@@ -1,3 +1,9 @@
+mgltools-volume (1.5.2.cvs.20081109-1) unstable; urgency=low
+
+ * New upstream version.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 09 Nov 2008 15:02:43 +0100
+
mgltools-volume (1.5.2.cvs.20080731-1) unstable; urgency=low
* Initial release, contributes to closing ITP #458811.
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