Author: plessy
Date: 2010-01-03 15:18:35 +0000 (Sun, 03 Jan 2010)
New Revision: 4508

Modified:
   trunk/packages/R/r-other-bio3d/trunk/debian/upstream-metadata.yaml
   trunk/packages/bioperl/trunk/debian/upstream-metadata.yaml
   trunk/packages/exonerate/trunk/debian/upstream-metadata.yaml
   trunk/packages/hmmer/trunk/debian/upstream-metadata.yaml
   trunk/packages/mummer/trunk/debian/upstream-metadata.yaml
   trunk/packages/perlprimer/trunk/debian/upstream-metadata.yaml
Log:
Syntax corrections.


Modified: trunk/packages/R/r-other-bio3d/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/R/r-other-bio3d/trunk/debian/upstream-metadata.yaml  
2010-01-03 15:17:25 UTC (rev 4507)
+++ trunk/packages/R/r-other-bio3d/trunk/debian/upstream-metadata.yaml  
2010-01-03 15:18:35 UTC (rev 4508)
@@ -3,18 +3,16 @@
 Gallery: http://mccammon.ucsd.edu/~bgrant/bio3d/gallery/gallery.html
 Homepage: http://mccammon.ucsd.edu/~bgrant/bio3d/
 Name: Bio3D
-PubMed: 16940322
-Reference: |
- @article{BarryJ. Grant11012006,
- author = {Grant, Barry J. and Rodrigues, Ana P. C. and ElSawy, Karim M. and 
McCammon, J. Andrew and Caves, Leo S. D.},
- title = {{Bio3d: an R package for the comparative analysis of protein 
structures}},
- journal = {Bioinformatics},
- volume = {22},
- number = {21},
- pages = {2695-2696},
- doi = {10.1093/bioinformatics/btl461},
- year = {2006},
- URL = 
{http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/21/2695},
- eprint = {http://bioinformatics.oxfordjournals.org/cgi/reprint/22/21/2695.pdf}
- }
+PMID: 16940322
+Reference: 
+ author: Grant, Barry J. and Rodrigues, Ana P. C. and ElSawy, Karim M. and 
McCammon, J. Andrew and Caves, Leo S. D.
+ title: {Bio3d: an R package for the comparative analysis of protein 
structures}
+ journal: Bioinformatics
+ volume: 22
+ number: 21
+ pages: 2695-2696
+ doi: 10.1093/bioinformatics/btl461
+ year: 2006
+ URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/21/2695
+ eprint: http://bioinformatics.oxfordjournals.org/cgi/reprint/22/21/2695.pdf
 Wiki: http://bio3d.pbworks.com/

Modified: trunk/packages/bioperl/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/bioperl/trunk/debian/upstream-metadata.yaml  2010-01-03 
15:17:25 UTC (rev 4507)
+++ trunk/packages/bioperl/trunk/debian/upstream-metadata.yaml  2010-01-03 
15:18:35 UTC (rev 4508)
@@ -1,21 +1,18 @@
 Bugtracker: http://bugzilla.open-bio.org/
 DOI: 10.1101/gr.361602
 Homepage: http://www.bioperl.org/
-PubMed: 12368254
-Reference: |
- @article{bioperl:2002,
-   author={J.E. Stajich and D. Block and K. Boulez and S.E. Brenner
+PMID: 12368254
+Reference: 
+   author: >
+        J.E. Stajich and D. Block and K. Boulez and S.E. Brenner
        and S.A. Chervitz and C. Dagdigian and G. Fuellen and J.G. Gilbert
        and I. Korf and H. Lapp and H. Lehvaslaiho and C. Matsalla and
        C.J. Mungall and B.I. Osborne and M.R. Pocock and P. Schattner and
-       M. Senger and L.D. Stein and E. Stupka and M.D. Wilkinson and E. 
Birney},
-   title="The Bioperl toolkit: Perl modules for the life sciences.",
-   journal="Genome Res.",
-   year=2002,
-   volume=12,
-   number=10,
-   pages="1611-1618",
-   doi={10.1101/gr.361602},
-   pmid="12368254"
- }
+       M. Senger and L.D. Stein and E. Stupka and M.D. Wilkinson and E. Birney
+   title: The Bioperl toolkit: Perl modules for the life sciences.
+   journal Genome Res.
+   year: 2002
+   volume: 12
+   number: 10
+   pages: 1611-1618
 Repository: svn://code.open-bio.org/bioperl/bioperl-live/

Modified: trunk/packages/exonerate/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/exonerate/trunk/debian/upstream-metadata.yaml        
2010-01-03 15:17:25 UTC (rev 4507)
+++ trunk/packages/exonerate/trunk/debian/upstream-metadata.yaml        
2010-01-03 15:18:35 UTC (rev 4508)
@@ -11,6 +11,6 @@
  Year: 2005
  Number: 1
  Pages: 31
- URL http://www.biomedcentral.com/1471-2105/6/31
+ URL: http://www.biomedcentral.com/1471-2105/6/31
  ISSN: 1471-2105
 Watch: http://www.ebi.ac.uk/~guy/exonerate/exonerate-([0-9.]*)\.tar\.gz

Modified: trunk/packages/hmmer/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/hmmer/trunk/debian/upstream-metadata.yaml    2010-01-03 
15:17:25 UTC (rev 4507)
+++ trunk/packages/hmmer/trunk/debian/upstream-metadata.yaml    2010-01-03 
15:18:35 UTC (rev 4508)
@@ -1,5 +1,5 @@
 Contact: http://selab.janelia.org/people/eddys/contact.html
-DOI = 10.1093/bioinformatics/14.9.755
+DOI: 10.1093/bioinformatics/14.9.755
 Name: HMMER
 Homepage: http://hmmer.janelia.org
 PMID: 9918945

Modified: trunk/packages/mummer/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/mummer/trunk/debian/upstream-metadata.yaml   2010-01-03 
15:17:25 UTC (rev 4507)
+++ trunk/packages/mummer/trunk/debian/upstream-metadata.yaml   2010-01-03 
15:18:35 UTC (rev 4508)
@@ -11,6 +11,6 @@
  Number: 2
  Pages: R12
  URL: http://genomebiology.com/2004/5/2/R12
- ISSN = 1465-6906
+ ISSN: 1465-6906
 Repository: http://mummer.cvs.sourceforge.net/mummer/
 Screenshots: http://sourceforge.net/project/screenshots.php?group_id=133157

Modified: trunk/packages/perlprimer/trunk/debian/upstream-metadata.yaml
===================================================================
--- trunk/packages/perlprimer/trunk/debian/upstream-metadata.yaml       
2010-01-03 15:17:25 UTC (rev 4507)
+++ trunk/packages/perlprimer/trunk/debian/upstream-metadata.yaml       
2010-01-03 15:18:35 UTC (rev 4508)
@@ -1,7 +1,7 @@
 Contact: http://perlprimer.sourceforge.net/contact.html
 DOI: 10.1093/bioinformatics/bth254
 Homepage: http://perlprimer.sourceforge.net
-PubMed: 15073005
+PMId: 15073005
 Reference: |
  @article{OwenJ. Marshall10122004,
  author = {Marshall, Owen J.},


_______________________________________________
debian-med-commit mailing list
[email protected]
http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit

Reply via email to