Author: tille Date: 2011-03-01 10:27:27 +0000 (Tue, 01 Mar 2011) New Revision: 6125
Modified: trunk/packages/python-cogent/trunk/debian/changelog trunk/packages/python-cogent/trunk/debian/control Log: Commit current state of packaging Modified: trunk/packages/python-cogent/trunk/debian/changelog =================================================================== --- trunk/packages/python-cogent/trunk/debian/changelog 2011-03-01 10:16:05 UTC (rev 6124) +++ trunk/packages/python-cogent/trunk/debian/changelog 2011-03-01 10:27:27 UTC (rev 6125) @@ -1,3 +1,28 @@ +python-cogent (1.5-1) unstable; urgency=low + + * Bumped standard to 3.9.1, no changes required. + * New upstream version. + - major additions to Cookbook + - added AlleleFreqs attribute to ensembl Variation objects. + - added getGeneByStableId method to genome objects. + - added Introns attribute to Transcript objects and an Intron class. + - added Mann-Whitney test and a Monte-Carlo version + - exploratory and confirmatory period estimation techniques (suitable for + symbolic and continuous data) + - Information theoretic measures (AIC and BIC) added + - drawing of trees with collapsed nodes + - progress display indicator support for terminal and GUI apps + - added parser for illumina HiSeq2000 and GAiix sequence files as + cogent.parse.illumina_sequence.MinimalIlluminaSequenceParser. + - added parser to FASTQ files, one of the output options for illumina's + workflow, also added cookbook demo. + - added functionality for parsing of SFF files without the Roche tools in + cogent.parse.binary_sff + - thousand fold performance improvement to nmds + - >10-fold performance improvements to some Table operations + + -- Steffen Moeller <[email protected]> Sat, 04 Dec 2010 22:30:35 +0100 + python-cogent (1.4.1-1.2) unstable; urgency=low * Non-maintainer upload. Modified: trunk/packages/python-cogent/trunk/debian/control =================================================================== --- trunk/packages/python-cogent/trunk/debian/control 2011-03-01 10:16:05 UTC (rev 6124) +++ trunk/packages/python-cogent/trunk/debian/control 2011-03-01 10:27:27 UTC (rev 6125) @@ -4,7 +4,7 @@ Maintainer: Debian Med Packaging Team <[email protected]> Uploaders: Sri Girish Srinivasa Murthy <[email protected]>, Steffen Moeller <[email protected]> Build-Depends: debhelper (>= 7), cdbs, python, python-central, python-numpy (>= 1.3.0), python-all-dev -Standards-Version: 3.9.0 +Standards-Version: 3.9.1 Homepage: http://pycogent.sourceforge.net/ Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/python-cogent/trunk/?rev=0&sc=0 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/python-cogent/trunk/ _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/mailman/listinfo/debian-med-commit
