The following commit has been merged in the master branch:
commit 625c4a7e615893e68c6273f6a8ab331ca29ef5ee
Author: Charles Plessy <[email protected]>
Date:   Thu May 19 13:18:48 2011 +0900

    Move the headers to /usr/include/samtools.

diff --git a/debian/changelog b/debian/changelog
index 58f7c71..f2c53c2 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,10 +1,10 @@
-samtools (0.1.16-1) UNRELEASED; urgency=low
+samtools (0.1.16-1) unstable; urgency=low
 
   * New upstream release, implementing SAM Spec v1.4.
-  * Distribute transiently sam.h in /usr/include. It will be moved later
-    with the other headers to /usr/include/samtools. Closes:#625622 LP:#690997.
+  * Distribute transiently sam.h and the other headers in 
/usr/include/samtools.
+    Closes: #625622,  #626044, LP: #690997.
 
- -- Charles Plessy <[email protected]>  Sun, 08 May 2011 17:55:01 +0900
+ -- Charles Plessy <[email protected]>  Thu, 19 May 2011 13:18:27 +0900
 
 samtools (0.1.15-1) unstable; urgency=low
 
diff --git a/debian/libbam-dev.install b/debian/libbam-dev.install
index fd5b197..4ffff63 100644
--- a/debian/libbam-dev.install
+++ b/debian/libbam-dev.install
@@ -1,6 +1,6 @@
 libbam.a       usr/lib
-bam.h          usr/include
-bgzf.h         usr/include
-khash.h                usr/include
-faidx.h                usr/include
-sam.h          usr/include
+bam.h          usr/include/samtools
+bgzf.h         usr/include/samtools
+khash.h                usr/include/samtools
+faidx.h                usr/include/samtools
+sam.h          usr/include/samtools

-- 
Processing of sequence alignments in SAM and BAM formats.

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