Author: gregsharp-guest Date: 2011-06-07 01:01:17 +0000 (Tue, 07 Jun 2011) New Revision: 6921
Added: trunk/packages/plastimatch/ trunk/packages/plastimatch/trunk/ trunk/packages/plastimatch/trunk/debian/ trunk/packages/plastimatch/trunk/debian/changelog trunk/packages/plastimatch/trunk/debian/compat trunk/packages/plastimatch/trunk/debian/control trunk/packages/plastimatch/trunk/debian/copyright trunk/packages/plastimatch/trunk/debian/rules trunk/packages/plastimatch/trunk/debian/source/ trunk/packages/plastimatch/trunk/debian/source/format trunk/packages/plastimatch/trunk/debian/watch Log: First attempt at debian files for plastimatch Added: trunk/packages/plastimatch/trunk/debian/changelog =================================================================== --- trunk/packages/plastimatch/trunk/debian/changelog (rev 0) +++ trunk/packages/plastimatch/trunk/debian/changelog 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1,5 @@ +plastimatch (1.5-1) experimental; urgency=low + + * Initial release (Closes: #629344) + + -- Greg Sharp <gregsharp....@yahoo.com> Sun, 05 Jun 2011 13:25:16 -0400 Property changes on: trunk/packages/plastimatch/trunk/debian/changelog ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/compat =================================================================== --- trunk/packages/plastimatch/trunk/debian/compat (rev 0) +++ trunk/packages/plastimatch/trunk/debian/compat 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1 @@ +7 Property changes on: trunk/packages/plastimatch/trunk/debian/compat ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/control =================================================================== --- trunk/packages/plastimatch/trunk/debian/control (rev 0) +++ trunk/packages/plastimatch/trunk/debian/control 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1,32 @@ +Source: plastimatch +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> +DM-Upload-Allowed: yes +Uploaders: Gregory C. Sharp <gregsharp....@yahoo.com> +Build-Depends: debhelper (>= 7.0.50~), cmake, + libinsighttoolkit3-dev (>= 3.20.0-5), libgdcm2-dev +Standards-Version: 3.9.1 +Homepage: http://plastimatch.org +Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/plastimatch/trunk/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/plastimatch/trunk/?rev=0&sc=0 + +Package: plastimatch +Section: science +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends} +Description: medical image reconstruction and registration + Plastimatch is an open source software for deformable image registration. It is designed for high-performance volumetric registration of medical images, such as X-ray computed tomography (CT), magnetic resonance imaging (MRI), and positron emission tomography (PET). Software features include: + * B-spline method for deformable image registration (GPU and multicore accelerated) + * Demons method for deformable image registration (GPU accelerated) + * ITK-based algorithms for translation, rigid, affine, demons, and B-spline registration + * Pipelined, multi-stage registration framework with seamless conversion between most algorithms and transform types + * Landmark-based deformable registration using thin-plate splines for global registration + * Landmark-based deformable registration using radial basis functions for local corrections + * Broad support for 3D image file formats (using ITK), including DICOM, Nifti, NRRD, MetaImage, and Analyze + * DICOM and DICOM-RT import and export + * XiO import and export + * Plugin to 3D Slicer + Plastimatch also features two handy utilities which are not directly related to image registration: + * FDK cone-beam CT reconstruction (GPU and multicore accelerated) + * Digitally reconstructed radiograph (DRR) generation (GPU and multicore accelerated) Property changes on: trunk/packages/plastimatch/trunk/debian/control ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/copyright =================================================================== --- trunk/packages/plastimatch/trunk/debian/copyright (rev 0) +++ trunk/packages/plastimatch/trunk/debian/copyright 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1,117 @@ +Name: plastimatch +Maintainer: Greg Sharp +Source: http://plastimatch.org + +Plastimatch Software License ("Software License") Version 1.0 + +This Software License covers downloads from the Plastimatch project +("Plastimatch") maintained by The General Hospital Corporation +Inc. ("MGH"). + +Your downloading, copying, modifying, displaying, distributing or use +of any software and/or data from Plastimatch (collectively, the +"Software") constitutes acceptance of all of the terms and conditions +of this Software License. If you do not agree to such terms and +conditions, you have no right to download, copy, modify, display, +distribute or use the Software. + + +1. As used in this Software License, "you" means the individual + downloading and/or using, reproducing, modifying, displaying and/or + distributing the Software and the institution or entity which + employs or is otherwise affiliated with such individual in + connection therewith. The MGH hereby grants you, with right to + sublicense, with respect to MGH's rights in the software, and data, + if any, which is the subject of this Software License + (collectively, the "Software"), a royalty-free, non-exclusive + license to use, reproduce, make derivative works of, display and + distribute the Software, provided that: + + (a) you accept and adhere to all of the terms and conditions of + this Software License; + + (b) in connection with any copy of or sublicense of all or any + portion of the Software, all of the terms and conditions in this + Software License shall appear in and shall apply to such copy and + such sublicense, including without limitation all source and + executable forms and on any user documentation, prefaced with the + following words: "All or portions of this licensed product (such + portions are the "Software") have been obtained under license from + MGH and are subject to the following terms and conditions:" + + (c) you preserve and maintain all applicable attributions, + copyright notices and licenses included in or applicable to the + Software; + + (d) modified versions of the Software must be clearly identified + and marked as such, and must not be misrepresented as being the + original Software; and + + (e) you consider making, but are under no obligation to make, the + source code of any of your modifications to the Software freely + available to others on an open source basis. + +2. The license granted under this Software License includes without + limitation the right to (i) incorporate the Software into + proprietary programs (subject to any restrictions applicable to + such programs), (ii) add your own copyright statement to your + modifications of the Software, and (iii) provide additional or + different license terms and conditions in your sublicenses of + modifications of the Software; provided that in each case your use, + reproduction or distribution of such modifications otherwise + complies with the conditions stated in this Software License. + +3. This Software License does not grant any rights with respect to + third party software, except those rights that MGH has been + authorized by a third party to grant to you, and accordingly you + are solely responsible for (i) obtaining any permissions from third + parties that you need to use, reproduce, make derivative works of, + display and distribute the Software, and (ii) informing your + sublicensees, including without limitation your end-users, of their + obligations to secure any such required permissions. + +4. The Software has been designed for research purposes only and has + not been reviewed or approved by the Food and Drug Administration + or by any other agency. YOU ACKNOWLEDGE AND AGREE THAT CLINICAL + APPLICATIONS ARE NEITHER RECOMMENDED NOR ADVISED. Any + commercialization of the Software is at the sole risk of the party + or parties engaged in such commercialization. You further agree to + use, reproduce, make derivative works of, display and distribute + the Software in compliance with all applicable governmental laws, + regulations and orders, including without limitation those relating + to export and import control. + +5. The Software is provided "AS IS" and neither MGH nor any + contributor to the software (each a "Contributor") shall have any + obligation to provide maintenance, support, updates, enhancements + or modifications thereto. MGH AND ALL CONTRIBUTORS SPECIFICALLY + DISCLAIM ALL EXPRESS AND IMPLIED WARRANTIES OF ANY KIND INCLUDING, + BUT NOT LIMITED TO, ANY WARRANTIES OF MERCHANTABILITY, FITNESS FOR + A PARTICULAR PURPOSE AND NON-INFRINGEMENT. IN NO EVENT SHALL MGH + OR ANY CONTRIBUTOR BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, + SPECIAL, INCIDENTAL, EXEMPLARY OR CONSEQUENTIAL DAMAGES HOWEVER + CAUSED AND ON ANY THEORY OF LIABILITY ARISING IN ANY WAY RELATED TO + THE SOFTWARE, EVEN IF MGH OR ANY CONTRIBUTOR HAS BEEN ADVISED OF + THE POSSIBILITY OF SUCH DAMAGES. TO THE MAXIMUM EXTENT NOT + PROHIBITED BY LAW OR REGULATION, YOU FURTHER ASSUME ALL LIABILITY + FOR YOUR USE, REPRODUCTION, MAKING OF DERIVATIVE WORKS, DISPLAY, + LICENSE OR DISTRIBUTION OF THE SOFTWARE AND AGREE TO INDEMNIFY AND + HOLD HARMLESS MGH AND ALL CONTRIBUTORS FROM AND AGAINST ANY AND ALL + CLAIMS, SUITS, ACTIONS, DEMANDS AND JUDGMENTS ARISING THEREFROM. + +6. None of the names, logos or trademarks of MGH or any of MGH's + affiliates or any of the Contributors, or any funding agency, may + be used to endorse or promote products produced in whole or in part + by operation of the Software or derived from or based on the + Software without specific prior written permission from the + applicable party. + +7. Any use, reproduction or distribution of the Software which is not + in accordance with this Software License shall automatically revoke + all rights granted to you under this Software License and render + Paragraphs 1 and 2 of this Software License null and void. + +8. This Software License does not grant any rights in or to any + intellectual property owned by MGH or any Contributor except those + rights expressly granted hereunder. + Property changes on: trunk/packages/plastimatch/trunk/debian/copyright ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/rules =================================================================== --- trunk/packages/plastimatch/trunk/debian/rules (rev 0) +++ trunk/packages/plastimatch/trunk/debian/rules 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1,13 @@ +#!/usr/bin/make -f +# -*- makefile -*- +# Sample debian/rules that uses debhelper. +# This file was originally written by Joey Hess and Craig Small. +# As a special exception, when this file is copied by dh-make into a +# dh-make output file, you may use that output file without restriction. +# This special exception was added by Craig Small in version 0.37 of dh-make. + +# Uncomment this to turn on verbose mode. +#export DH_VERBOSE=1 + +%: + dh $@ Property changes on: trunk/packages/plastimatch/trunk/debian/rules ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/source/format =================================================================== --- trunk/packages/plastimatch/trunk/debian/source/format (rev 0) +++ trunk/packages/plastimatch/trunk/debian/source/format 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1 @@ +3.0 (quilt) Property changes on: trunk/packages/plastimatch/trunk/debian/source/format ___________________________________________________________________ Added: svn:executable + * Added: trunk/packages/plastimatch/trunk/debian/watch =================================================================== --- trunk/packages/plastimatch/trunk/debian/watch (rev 0) +++ trunk/packages/plastimatch/trunk/debian/watch 2011-06-07 01:01:17 UTC (rev 6921) @@ -0,0 +1,2 @@ +version=3 +http://forge.abcd.harvard.edu/gf/project/plastimatch/frs/ .*/plastimatch-(.+)-.*-Source.tar.bz2 Property changes on: trunk/packages/plastimatch/trunk/debian/watch ___________________________________________________________________ Added: svn:executable + * _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit