Author: tille Date: 2011-10-28 08:52:06 +0000 (Fri, 28 Oct 2011) New Revision: 8334
Modified: trunk/packages/transtermhp/trunk/debian/changelog trunk/packages/transtermhp/trunk/debian/compat trunk/packages/transtermhp/trunk/debian/control Log: Uploaded new upstream version prepared by Alexander Mestiashvili; some packaging updates; removed citations from long description because it is in upstream-metadata.yaml Modified: trunk/packages/transtermhp/trunk/debian/changelog =================================================================== --- trunk/packages/transtermhp/trunk/debian/changelog 2011-10-28 08:41:25 UTC (rev 8333) +++ trunk/packages/transtermhp/trunk/debian/changelog 2011-10-28 08:52:06 UTC (rev 8334) @@ -1,9 +1,17 @@ transtermhp (2.09-1) unstable; urgency=low + [ Alex Mestiashvili ] * New upstream release. - -- Alex Mestiashvili <[email protected]> Tue, 01 Mar 2011 12:24:47 +0000 + [ Andreas Tille ] + * Standards-Version: 3.9.2 (no changes needed) + * Debhelper 8 (compat+control) + * Fixed Vcs fields + * Stripped citation from long descriptions because it can be found in + debian/upstream-metadata.yaml + -- Andreas Tille <[email protected]> Fri, 28 Oct 2011 10:44:24 +0200 + transtermhp (2.07-1) unstable; urgency=low * Initial release (Closes: #614382) Modified: trunk/packages/transtermhp/trunk/debian/compat =================================================================== --- trunk/packages/transtermhp/trunk/debian/compat 2011-10-28 08:41:25 UTC (rev 8333) +++ trunk/packages/transtermhp/trunk/debian/compat 2011-10-28 08:52:06 UTC (rev 8334) @@ -1 +1 @@ -7 +8 Modified: trunk/packages/transtermhp/trunk/debian/control =================================================================== --- trunk/packages/transtermhp/trunk/debian/control 2011-10-28 08:41:25 UTC (rev 8333) +++ trunk/packages/transtermhp/trunk/debian/control 2011-10-28 08:52:06 UTC (rev 8334) @@ -3,12 +3,13 @@ Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> DM-Upload-Allowed: yes -Uploaders: Alex Mestiashvili <[email protected]> -Build-Depends: debhelper (>= 7.0.50~), quilt (>= 0.47) -Standards-Version: 3.9.1 +Uploaders: Alex Mestiashvili <[email protected]>, + Andreas Tille <[email protected]> +Build-Depends: debhelper (>= 8), quilt (>= 0.47) +Standards-Version: 3.9.2 Homepage: http://transterm.cbcb.umd.edu/ -Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/transtermhp/trunk/?rev=0&sc=0 -Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/transtermhp/trunk/ +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/transtermhp/trunk/ +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/transtermhp/trunk/ Package: transtermhp Architecture: any @@ -17,16 +18,5 @@ TransTermHP finds rho-independent transcription terminators in bacterial genomes. Each terminator found by the program is assigned a confidence value that estimates its probability of being a true - terminator. TransTermHP is described in: - . - C. Kingsford, K. Ayanbule and S.L. Salzberg. Rapid, accurate, - computational discovery of Rho-independent transcription terminators - illuminates their relationship to DNA uptake. Genome Biology 8:R22 - (2007). - . - A predecessor system, TransTerm, that used very different search and - scoring algorithms is described in: - . - Maria D. Ermolaeva, Hanif G. Khalak, Owen White, Hamilton O. Smith and - Steven L. Salzberg. Prediction of Transcription Terminators in Bacterial - Genomes. J Mol Biol 301, (1), 27-33 (2000) + terminator. TransTermHP is the successor of TransTerm which was using + very different search and scoring algorithms. _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
