Author: tille Date: 2012-01-18 21:44:19 +0000 (Wed, 18 Jan 2012) New Revision: 9336
Added: trunk/packages/libhmsbeagle/trunk/debian/libbeagle-java.jlibs trunk/packages/libhmsbeagle/trunk/debian/watch Modified: trunk/packages/libhmsbeagle/trunk/debian/changelog trunk/packages/libhmsbeagle/trunk/debian/control trunk/packages/libhmsbeagle/trunk/debian/rules Log: Try to build java lib as well, needs checking and lintian cleaning Modified: trunk/packages/libhmsbeagle/trunk/debian/changelog =================================================================== --- trunk/packages/libhmsbeagle/trunk/debian/changelog 2012-01-18 21:18:11 UTC (rev 9335) +++ trunk/packages/libhmsbeagle/trunk/debian/changelog 2012-01-18 21:44:19 UTC (rev 9336) @@ -1,3 +1,9 @@ +libhmsbeagle (1.0-1) unstable; urgency=low + + * Initial upload to Debian (Closes: #???) + + -- Andreas Tille <[email protected]> Wed, 18 Jan 2012 22:22:47 +0100 + libhmsbeagle (0.1052-2) unstable; urgency=low * Initial build for PPA/experimental. Modified: trunk/packages/libhmsbeagle/trunk/debian/control =================================================================== --- trunk/packages/libhmsbeagle/trunk/debian/control 2012-01-18 21:18:11 UTC (rev 9335) +++ trunk/packages/libhmsbeagle/trunk/debian/control 2012-01-18 21:44:19 UTC (rev 9336) @@ -4,7 +4,8 @@ DM-Upload-Allowed: yes Uploaders: Tim Booth <[email protected]>, Andreas Tille <[email protected]> -Build-Depends: quilt (>= 0.46-7~), debhelper (>= 7.0.50~), autoconf (>= 2.65), automake (>= 1:1.11) , libtool, doxygen, openjdk-6-jdk +Build-Depends: debhelper (>= 7.0.50~), autoconf (>= 2.65), automake (>= 1:1.11), libtool, + doxygen, javahelper (>=0.25), default-jdk, ant Standards-Version: 3.9.2 Section: libs Homepage: http://code.google.com/p/beagle-lib @@ -60,3 +61,24 @@ (GPUs) is available from: . http://tree.bio.ed.ac.uk/publications/390/ + +Package: libbeagle-java +Architecture: all +Section: java +Depends: ${java:Depends}, ${misc:Depends}, ${shlibs:Depends} +Recommends: ${java:Recommends} +Description: library for Bayesian and Maximum Likelihood phylogenetics + BEAGLE is a high-performance library that can perform the core + calculations at the heart of most Bayesian and Maximum Likelihood + phylogenetics packages. It can make use of highly-parallel processors + such as those in graphics cards (GPUs) found in many PCs. + . + The project involves an open API and fast implementations of a library + for evaluating phylogenetic likelihoods (continuous time Markov + processes) of biomolecular sequence evolution. + . + The aim is to provide high performance evaluation 'services' to a wide + range of phylogenetic software, both Bayesian samplers and Maximum + Likelihood optimizers. This allows these packages to make use of + implementations that make use of optimized hardware such as graphics + processing units. Added: trunk/packages/libhmsbeagle/trunk/debian/libbeagle-java.jlibs =================================================================== --- trunk/packages/libhmsbeagle/trunk/debian/libbeagle-java.jlibs (rev 0) +++ trunk/packages/libhmsbeagle/trunk/debian/libbeagle-java.jlibs 2012-01-18 21:44:19 UTC (rev 9336) @@ -0,0 +1 @@ +lib/*.jar Modified: trunk/packages/libhmsbeagle/trunk/debian/rules =================================================================== --- trunk/packages/libhmsbeagle/trunk/debian/rules 2012-01-18 21:18:11 UTC (rev 9335) +++ trunk/packages/libhmsbeagle/trunk/debian/rules 2012-01-18 21:44:19 UTC (rev 9336) @@ -6,7 +6,7 @@ #export DH_VERBOSE=1 %: - dh --with quilt $@ + dh $@ --with javahelper override_dh_auto_configure: ./autogen.sh @@ -15,6 +15,7 @@ override_dh_auto_build: $(MAKE) $(MAKE) doxygen-doc + ant override_dh_auto_install: dh_auto_install @@ -33,6 +34,7 @@ override_dh_auto_clean: $(MAKE) -f Makefile distclean || true rm -rf doc .config configure + rm -rf lib build get-orig-source: . debian/get-orig-source Added: trunk/packages/libhmsbeagle/trunk/debian/watch =================================================================== --- trunk/packages/libhmsbeagle/trunk/debian/watch (rev 0) +++ trunk/packages/libhmsbeagle/trunk/debian/watch 2012-01-18 21:44:19 UTC (rev 9336) @@ -0,0 +1,4 @@ +version=3 +opts="uversionmangle=s/_/./g" \ + http://beagle-lib.googlecode.com/svn/tags/ beagle_release_([_.\d]+)/ \ + debian debian/get-orig-source _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
