Andreas Tille pushed to branch master at Debian Med / snp-sites
Commits: dc00887f by Andreas Tille at 2021-10-01T16:08:54+02:00 Fix watch file - - - - - 1d23e592 by Andreas Tille at 2021-10-01T16:09:09+02:00 routine-update: Standards-Version: 4.6.0 - - - - - 2797e9c1 by Andreas Tille at 2021-10-01T16:09:09+02:00 routine-update: debhelper-compat 13 - - - - - 29aa20ce by Andreas Tille at 2021-10-01T16:09:14+02:00 routine-update: Remove trailing whitespace in debian/changelog - - - - - da0fa9fb by Andreas Tille at 2021-10-01T16:09:14+02:00 routine-update: Add salsa-ci file - - - - - 6b290a4e by Andreas Tille at 2021-10-01T16:09:14+02:00 routine-update: Rules-Requires-Root: no - - - - - f1106c69 by Andreas Tille at 2021-10-01T16:09:14+02:00 routine-update: No tab in license text - - - - - abaeb2e4 by Andreas Tille at 2021-10-01T16:09:14+02:00 Trim trailing whitespace. Changes-By: lintian-brush Fixes: lintian: trailing-whitespace See-also: https://lintian.debian.org/tags/trailing-whitespace.html - - - - - 9be22d1f by Andreas Tille at 2021-10-01T16:09:16+02:00 Set upstream metadata fields: Bug-Database, Bug-Submit. Changes-By: lintian-brush Fixes: lintian: upstream-metadata-missing-bug-tracking See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html - - - - - 5fb63c03 by Andreas Tille at 2021-10-01T16:09:19+02:00 Apply multi-arch hints. + libsnp-sites1, libsnp-sites1-dev: Add Multi-Arch: same. Changes-By: apply-multiarch-hints - - - - - 4363b4ba by Andreas Tille at 2021-10-01T16:16:37+02:00 Remove *.la file which should not be installed - - - - - ba51699d by Andreas Tille at 2021-10-01T16:17:36+02:00 Upload to unstable - - - - - 8 changed files: - debian/changelog - − debian/compat - debian/control - debian/copyright - debian/rules - + debian/salsa-ci.yml - debian/upstream/metadata - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,20 @@ +snp-sites (2.5.1-2) unstable; urgency=medium + + * Fix watch file + * Standards-Version: 4.6.0 (routine-update) + * debhelper-compat 13 (routine-update) + * Remove trailing whitespace in debian/changelog (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * No tab in license text (routine-update) + * Trim trailing whitespace. + * Set upstream metadata fields: Bug-Database, Bug-Submit. + * Apply multi-arch hints. + + libsnp-sites1, libsnp-sites1-dev: Add Multi-Arch: same. + * Remove *.la file which should not be installed + + -- Andreas Tille <[email protected]> Fri, 01 Oct 2021 16:16:44 +0200 + snp-sites (2.5.1-1) unstable; urgency=medium [ Andreas Tille ] @@ -68,7 +85,7 @@ snp-sites (2.2.2-1) unstable; urgency=medium snp-sites (2.1.3-2) unstable; urgency=medium - * Add copyright entry for new script. + * Add copyright entry for new script. -- Sascha Steinbiss <[email protected]> Sat, 30 Jan 2016 11:20:21 +0000 @@ -94,7 +111,7 @@ snp-sites (2.1.0-2) unstable; urgency=medium snp-sites (2.1.0-1) unstable; urgency=medium * New upstream release - * Add simple autopkgtest + * Add simple autopkgtest -- Sascha Steinbiss <[email protected]> Thu, 03 Dec 2015 21:40:00 +0000 @@ -133,4 +150,3 @@ snp-sites (1.3-1) unstable; urgency=low * Initial release (Closes: #735180) -- Jorge Soares <[email protected]> Fri, 10 Jan 2014 15:55:19 +0000 - ===================================== debian/compat deleted ===================================== @@ -1 +0,0 @@ -11 ===================================== debian/control ===================================== @@ -5,16 +5,17 @@ Uploaders: Jorge Soares <[email protected]>, Sascha Steinbiss <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 11), +Build-Depends: debhelper-compat (= 13), zlib1g-dev, check, pkg-config, d-shlibs, asciidoctor -Standards-Version: 4.1.4 +Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/snp-sites Vcs-Git: https://salsa.debian.org/med-team/snp-sites.git Homepage: https://github.com/sanger-pathogens/snp-sites +Rules-Requires-Root: no Package: snp-sites Architecture: any @@ -42,6 +43,7 @@ Architecture: any Section: libs Depends: ${shlibs:Depends}, ${misc:Depends} +Multi-Arch: same Description: Shared libraries of the package snp-sites Snp-sites finds single nucleotide polymorphism (SNP) sites from multi-fasta alignment input files (which might be compressed). Its @@ -60,6 +62,7 @@ Depends: ${shlibs:Depends}, libsnp-sites1 (= ${binary:Version}) Conflicts: libsnp-sites-dev Provides: libsnp-sites-dev +Multi-Arch: same Description: Static libraries and header files for the package snp-sites Snp-sites finds single nucleotide polymorphism (SNP) sites from multi-fasta alignment input files (which might be compressed). Its ===================================== debian/copyright ===================================== @@ -4,8 +4,8 @@ Source: https://github.com/sanger-pathogens/snp-sites Files: * Copyright: - 2012-2013 Andrew Page <[email protected]> - 2013-2013 Jorge Soares <[email protected]> + 2012-2013 Andrew Page <[email protected]> + 2013-2013 Jorge Soares <[email protected]> License: GPL-3+ Files: paper_supporting_material/snp_sites_create_simulated_data @@ -32,7 +32,7 @@ License: GPL-3+ Files: src/kseq.h Copyright: - 2008-2011 Attractive Chaos <[email protected]> + 2008-2011 Attractive Chaos <[email protected]> License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the ===================================== debian/rules ===================================== @@ -9,7 +9,7 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all mandir := $(CURDIR)/debian/man %: - dh $@ --with autoreconf + dh $@ override_dh_install: dh_install @@ -18,6 +18,7 @@ override_dh_install: --exclude-la \ --movedev "debian/tmp/usr/include/snp-sites/*.h" usr/include/snp-sites \ debian/tmp/usr/lib/*/libsnp-sites.so + find debian -name "lib*.la" -delete override_dh_installman: mkdir -p $(mandir) ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/upstream/metadata ===================================== @@ -1,3 +1,5 @@ +Bug-Database: https://github.com/sanger-pathogens/snp-sites/issues +Bug-Submit: https://github.com/sanger-pathogens/snp-sites/issues/new Reference: Author: > Andrew J. Page and Ben Taylor and Aidan J. Delaney and Jorge Soares and ===================================== debian/watch ===================================== @@ -1,3 +1,2 @@ version=4 -https://github.com/sanger-pathogens/snp-sites/tags \ - /sanger-pathogens/snp-sites/archive/v?([.\d]+)\.tar\.gz +https://github.com/sanger-pathogens/snp-sites/tags .*/v?@ANY_VERSION@\.tar\.gz View it on GitLab: https://salsa.debian.org/med-team/snp-sites/-/compare/6c8883c6476d1c891ee3f79abcccd249b5b90ab5...ba51699ded84ce6803db79aa6fb06023f38bb613 -- View it on GitLab: https://salsa.debian.org/med-team/snp-sites/-/compare/6c8883c6476d1c891ee3f79abcccd249b5b90ab5...ba51699ded84ce6803db79aa6fb06023f38bb613 You're receiving this email because of your account on salsa.debian.org.
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