Andreas Tille pushed to branch master at Debian Med / libbpp-seq
Commits: 68d93048 by Andreas Tille at 2021-10-11T10:25:09+02:00 Fix watchfile to detect new versions on github - - - - - 61797c79 by Andreas Tille at 2021-10-11T10:25:54+02:00 routine-update: Standards-Version: 4.6.0 - - - - - 96ef682d by Andreas Tille at 2021-10-11T10:35:16+02:00 Fix ftbfs with gcc-11 - - - - - 2e55a1c2 by Andreas Tille at 2021-10-11T10:35:29+02:00 Drip unneeded versioned Build-Depends - - - - - eb8fb139 by Andreas Tille at 2021-10-11T10:38:11+02:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - debian/libbpp-seq12.symbols.amd64 - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,12 @@ +libbpp-seq (2.4.1-6) unstable; urgency=medium + + * Fix watchfile to detect new versions on github + * Standards-Version: 4.6.0 (routine-update) + * Fix ftbfs with gcc-11 + Closes: #984094 + + -- Andreas Tille <[email protected]> Mon, 11 Oct 2021 10:35:48 +0200 + libbpp-seq (2.4.1-5) unstable; urgency=medium * Standards-Version: 4.5.0 (routine-update) ===================================== debian/control ===================================== @@ -6,9 +6,9 @@ Section: science Priority: optional Build-Depends: debhelper-compat (= 13), cmake, - d-shlibs (>= 0.80), - libbpp-core-dev (>= 2.4.1) -Standards-Version: 4.5.0 + d-shlibs, + libbpp-core-dev +Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq.git Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page @@ -19,7 +19,7 @@ Architecture: any Section: libdevel Depends: libbpp-seq12 (= ${binary:Version}), ${misc:Depends}, - libbpp-core-dev (>= 2.4.1) + libbpp-core-dev Description: Bio++ Sequence library development files Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. ===================================== debian/libbpp-seq12.symbols.amd64 ===================================== @@ -12,6 +12,7 @@ libbpp-seq.so.12 libbpp-seq12 #MINVER# _ZN3bpp10NexusTools21getNextNonCommentLineB5cxx11ERSi@Base 2.4.1 _ZN3bpp11AAMassIndexD0Ev@Base 2.4.1 _ZN3bpp11AAMassIndexD1Ev@Base 2.4.1 + _ZN3bpp11GeneticCodeC2ERKS0_@Base 2.4.1 _ZN3bpp11GeneticCodeD2Ev@Base 2.4.1 _ZN3bpp11IOExceptionD0Ev@Base 2.4.1 _ZN3bpp11IOExceptionD1Ev@Base 2.4.1 @@ -1830,8 +1831,6 @@ libbpp-seq.so.12 libbpp-seq12 #MINVER# _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE8_M_eraseEPSt13_Rb_tree_nodeIS8_E@Base 2.4.1 - _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EEC1ERKSE_@Base 2.4.1 - _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_S5_ESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EEC2ERKSE_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St4fposI11__mbstate_tEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE24_M_get_insert_unique_posERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St4fposI11__mbstate_tEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorISB_ERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_St4fposI11__mbstate_tEESt10_Select1stISB_ESt4lessIS5_ESaISB_EE8_M_eraseEPSt13_Rb_tree_nodeISB_E@Base 2.4.1 @@ -1844,15 +1843,11 @@ libbpp-seq.so.12 libbpp-seq12 #MINVER# _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE24_M_get_insert_unique_posERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_@Base 2.4.1 _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE4findERS7_@Base 2.4.1 - _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EEC1ERKSE_@Base 2.4.1 - _ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_mESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EEC2ERKSE_@Base 2.4.1 _ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIcSt4pairIKcdESt10_Select1stIS2_ESt4lessIcESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base 2.4.1 - _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EEC1ERKS8_@Base 2.4.1 - _ZNSt8_Rb_treeIdSt4pairIKdmESt10_Select1stIS2_ESt4lessIdESaIS2_EEC2ERKS8_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKiSt3mapIidSt4lessIiESaIS0_IS1_dEEEESt10_Select1stIS8_ES4_SaIS8_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKiSt3mapIidSt4lessIiESaIS0_IS1_dEEEESt10_Select1stIS8_ES4_SaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKidESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 @@ -1860,12 +1855,8 @@ libbpp-seq.so.12 libbpp-seq12 #MINVER# _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EE8_M_eraseEPSt13_Rb_tree_nodeIS2_E@Base 2.4.1 - _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EEC1ERKS8_@Base 2.4.1 - _ZNSt8_Rb_treeIiSt4pairIKiiESt10_Select1stIS2_ESt4lessIiESaIS2_EEC2ERKS8_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS2_ERS1_@Base 2.4.1 - _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEC1ERKS8_@Base 2.4.1 - _ZNSt8_Rb_treeIiSt4pairIKimESt10_Select1stIS2_ESt4lessIiESaIS2_EEC2ERKS8_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmPN3bpp13SiteContainerEESt10_Select1stIS5_ESt4lessImESaIS5_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS5_ERS1_@Base 2.4.1 _ZNSt8_Rb_treeImSt4pairIKmmESt10_Select1stIS2_ESt4lessImESaIS2_EE24_M_get_insert_unique_posERS1_@Base 2.4.1 @@ -2339,6 +2330,7 @@ libbpp-seq.so.12 libbpp-seq12 #MINVER# _ZTVN3bpp14AASurfaceIndexE@Base 2.4.1 _ZTVN3bpp14BinaryAlphabetE@Base 2.4.1 _ZTVN3bpp14DistanceMatrixE@Base 2.4.1 + _ZTVN3bpp14TransliteratorE@Base 2.4.1 _ZTVN3bpp15AASEAInf10IndexE@Base 2.4.1 _ZTVN3bpp15AASEASup30IndexE@Base 2.4.1 _ZTVN3bpp15BadIntExceptionE@Base 2.4.1 ===================================== debian/watch ===================================== @@ -1,3 +1,3 @@ version=4 -https://github.com/BioPP/bpp-seq/releases .*/archive/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) +https://github.com/BioPP/bpp-seq/releases .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq/-/compare/4f6045c406e426f68912fac625f16bf674f57e35...eb8fb1395c30ab4271998928dd444c9693d51e5c -- View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq/-/compare/4f6045c406e426f68912fac625f16bf674f57e35...eb8fb1395c30ab4271998928dd444c9693d51e5c You're receiving this email because of your account on salsa.debian.org.
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