Nilesh Patra pushed to branch master at Debian Med / assembly-stats
Commits: f17fb8b6 by Nilesh Patra at 2021-10-31T01:33:19+05:30 Add patch to fix FTBFS with gcc-11 (Closes: #997122) - - - - - c5e1d684 by Nilesh Patra at 2021-10-31T01:33:19+05:30 Update d/u/metadata - - - - - b6b9a1c8 by Nilesh Patra at 2021-10-31T01:33:19+05:30 Upload to unstable - - - - - 5 changed files: - debian/changelog - debian/patches/add-debug-flag.patch - + debian/patches/gcc11.patch - debian/patches/series - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +assembly-stats (1.0.1+ds-5) unstable; urgency=medium + + * Team Upload. + * Add patch to fix FTBFS with gcc-11 (Closes: #997122) + * Update d/u/metadata + + -- Nilesh Patra <[email protected]> Sun, 31 Oct 2021 01:26:55 +0530 + assembly-stats (1.0.1+ds-4) unstable; urgency=medium [ Steffen Moeller ] ===================================== debian/patches/add-debug-flag.patch ===================================== @@ -1,3 +1,7 @@ +Description: Do not take address of rvalue, rather simply append value into ostringstream and convert to string with str() +Author: Nilesh Patra <[email protected]> +Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=997122 +Last-Update: 2021-10-31 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -1,7 +1,7 @@ ===================================== debian/patches/gcc11.patch ===================================== @@ -0,0 +1,26 @@ +--- a/fastq_unittest.cpp ++++ b/fastq_unittest.cpp +@@ -50,7 +50,9 @@ + while (fq.fillFromFile(inStream)) + { + counter++; +- string expectedName = static_cast<ostringstream*>( &(ostringstream() << counter) )->str(); ++ ostringstream ret_ostream; ++ ret_ostream << counter; ++ string expectedName(ret_ostream.str()); + EXPECT_EQ(0, fq.name().compare(expectedName)); + EXPECT_EQ(0, fq.seq().compare("ACGT")); + } +--- a/fasta_unittest.cpp ++++ b/fasta_unittest.cpp +@@ -94,7 +94,9 @@ + while (fa.fillFromFile(inStream)) + { + counter++; +- string expectedName = static_cast<ostringstream*>( &(ostringstream() << counter) )->str(); ++ ostringstream ret_ostream; ++ ret_ostream << counter; ++ string expectedName(ret_ostream.str()); + EXPECT_EQ(0, fa.name().compare(expectedName)); + EXPECT_EQ(0, fa.seq().compare("ACGT")); + } ===================================== debian/patches/series ===================================== @@ -1,3 +1,4 @@ use_debian_packages_gtest.patch do-not-test-forcefully.patch add-debug-flag.patch +gcc11.patch ===================================== debian/upstream/metadata ===================================== @@ -1,5 +1,10 @@ +--- +Archive: GitHub Bug-Database: https://github.com/sanger-pathogens/assembly-stats/issues Bug-Submit: https://github.com/sanger-pathogens/assembly-stats/issues/new +Changelog: https://github.com/sanger-pathogens/assembly-stats/tags +Repository: https://github.com/sanger-pathogens/assembly-stats.git +Repository-Browse: https://github.com/sanger-pathogens/assembly-stats Registry: - Name: conda:bioconda Entry: assembly-stats View it on GitLab: https://salsa.debian.org/med-team/assembly-stats/-/compare/a90ffd4bbed0d7f59aec5a0b5f76c15c315d12c7...b6b9a1c8a3620afa298157f31bde823f6d7b0c3b -- View it on GitLab: https://salsa.debian.org/med-team/assembly-stats/-/compare/a90ffd4bbed0d7f59aec5a0b5f76c15c315d12c7...b6b9a1c8a3620afa298157f31bde823f6d7b0c3b You're receiving this email because of your account on salsa.debian.org.
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