Author: tille Date: 2012-04-24 20:54:04 +0000 (Tue, 24 Apr 2012) New Revision: 10568
Added: trunk/packages/saint/ trunk/packages/saint/trunk/ trunk/packages/saint/trunk/debian/ trunk/packages/saint/trunk/debian/changelog trunk/packages/saint/trunk/debian/control trunk/packages/saint/trunk/debian/upstream trunk/packages/saint/trunk/debian/watch Modified: trunk/packages/ncbi-epcr/trunk/debian/copyright Log: Inject saint (and restore values in ncbi-epcr copyright which was uncommited on my harddisk) Modified: trunk/packages/ncbi-epcr/trunk/debian/copyright =================================================================== --- trunk/packages/ncbi-epcr/trunk/debian/copyright 2012-04-24 12:03:53 UTC (rev 10567) +++ trunk/packages/ncbi-epcr/trunk/debian/copyright 2012-04-24 20:54:04 UTC (rev 10568) @@ -1,4 +1,6 @@ Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: e-PCR +Upstream-Contact: Kirill Rotmistrovsky <[email protected]> Source: ftp://ftp.ncbi.nlm.nih.gov/pub/schuler/e-PCR/e-PCR-2.3.12-src.tar.gz Files: * Added: trunk/packages/saint/trunk/debian/changelog =================================================================== --- trunk/packages/saint/trunk/debian/changelog (rev 0) +++ trunk/packages/saint/trunk/debian/changelog 2012-04-24 20:54:04 UTC (rev 10568) @@ -0,0 +1,5 @@ +saint (2.3.2-1) UNRELEASED; urgency=low + + * Initial Release (Closes: #?) + + -- Andreas Tille <[email protected]> Tue, 24 Apr 2012 22:18:38 +0200 Added: trunk/packages/saint/trunk/debian/control =================================================================== --- trunk/packages/saint/trunk/debian/control (rev 0) +++ trunk/packages/saint/trunk/debian/control 2012-04-24 20:54:04 UTC (rev 10568) @@ -0,0 +1,21 @@ +Source: saint +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team <[email protected]> +Uploaders: Andreas Tille <[email protected]> +Build-Depends: debhelper (>= 8) +Standards-Version: 3.9.3 +Homepage: http://saint-apms.sourceforge.net/Main.html +Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/saint/ +Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/saint/trunk/ + +Package: saint +Architecture: any +Depends: ${shlibs:Depends}, ${misc:Depends} +Description: Significance Analysis of INTeractome + SAINT is a software for assigning confidence scores to protein-protein + interactions based on quantitative proteomics data in AP-MS experiments. + We posted the version used for spectral count data in the yeast kinase + interactome work not incorporating control purification, as well as a + generalized implementation for spectral count data with and without + control purification. Added: trunk/packages/saint/trunk/debian/upstream =================================================================== --- trunk/packages/saint/trunk/debian/upstream (rev 0) +++ trunk/packages/saint/trunk/debian/upstream 2012-04-24 20:54:04 UTC (rev 10568) @@ -0,0 +1,22 @@ +Reference: + - Author: A. Breitkreutz and H. Choi and J.R. Sharom and L. Boucher and V. Neduva and B. Larsen and Z.Y. Lin and B.J. Breitkreutz and C. Stark and G. Liu and J. Ahn and D. Dewar-Darch and T. Reguly and X. Tang and R. Almeida and Z.S. Qin and T. Pawson and A.-C. Gingras and A.I. Nesvizhskii and M. Tyers + Title: A global protein kinase and phosphatase interaction network in yeast + Journal: Science + Year: 2010 + Volume: 328 + Number: 5981 + Pages: 1043-6 + DOI: 10.1126/science.1176495 + PMID: 20489023 + URL: http://www.mendeley.com/research/global-protein-kinase-phosphatase-interaction-network-yeast-49/ + ISSN: 00368075 + - Author: Hyungwon Choi and Brett Larsen and Zhen-Yuan Lin and Ashton Breitkreutz and Dattatreya Mellacheruvu and Damian Fermin and Zhaohui S Qin and Mike Tyers and Anne-Claude Gingras and Alexey I Nesvizhskii + Title: "SAINT: probabilistic scoring of affinity purification–mass spectrometry data" + Journal: Nature Methods + Year: 2010 + Volume: 8 + Pages: 70–73 + DOI: 10.1038/nmeth.1541 + PMID: 21131968 + URL: http://www.nature.com/nmeth/journal/v8/n1/abs/nmeth.1541.html + eprint: http://www.nature.com/nmeth/journal/v8/n1/full/nmeth.1541.html Added: trunk/packages/saint/trunk/debian/watch =================================================================== --- trunk/packages/saint/trunk/debian/watch (rev 0) +++ trunk/packages/saint/trunk/debian/watch 2012-04-24 20:54:04 UTC (rev 10568) @@ -0,0 +1,2 @@ +version=3 +http://sf.net/saint-apms/SAINT_v.?([.\d]+)\.zip _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
