Andreas Tille pushed to branch master at Debian Med / q2-metadata
Commits:
964bdf95 by Andreas Tille at 2024-02-18T15:10:50+01:00
Autopkgtest for all supported Python3 versions
- - - - -
d1776eb6 by Andreas Tille at 2024-02-18T15:11:20+01:00
New upstream version 2024.2.0+dfsg
- - - - -
c81f5f54 by Andreas Tille at 2024-02-18T15:11:20+01:00
routine-update: New upstream version
- - - - -
8997f6d4 by Andreas Tille at 2024-02-18T15:11:21+01:00
Update upstream source from tag 'upstream/2024.2.0+dfsg'
Update to upstream version '2024.2.0+dfsg'
with Debian dir 43a94e7280653ba4887692a853a767607fe7afc5
- - - - -
1ff87940 by Andreas Tille at 2024-02-18T15:12:04+01:00
routine-update: Regenerate debian/control from debian/control.in
- - - - -
2f7254e9 by Andreas Tille at 2024-02-18T15:24:02+01:00
Upload to unstable
- - - - -
8 changed files:
- .github/workflows/ci-dev.yaml
- .gitignore
- README.md
- debian/changelog
- debian/control
- debian/tests/control
- debian/tests/run-unit-test
- q2_metadata/_version.py
Changes:
=====================================
.github/workflows/ci-dev.yaml
=====================================
@@ -9,4 +9,4 @@ jobs:
ci:
uses: qiime2/distributions/.github/workflows/lib-ci-dev.yaml@dev
with:
- distro: core
\ No newline at end of file
+ distro: amplicon
=====================================
.gitignore
=====================================
@@ -70,3 +70,6 @@ target/
.DS_Store
node_modules
+
+#Editor file
+.vscode
\ No newline at end of file
=====================================
README.md
=====================================
@@ -1,5 +1,5 @@
# q2-metadata
-
+
This is a QIIME 2 plugin. For details on QIIME 2, see https://qiime2.org.
\ No newline at end of file
=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+q2-metadata (2024.2.0+dfsg-1) unstable; urgency=medium
+
+ * Team upload.
+ * New upstream version
+ * Autopkgtest for all supported Python3 versions
+ * Regenerate debian/control from debian/control.in (routine-update)
+
+ -- Andreas Tille <ti...@debian.org> Sun, 18 Feb 2024 15:12:04 +0100
+
q2-metadata (2023.9.0+dfsg-1) unstable; urgency=medium
* Team upload.
=====================================
debian/control
=====================================
@@ -14,10 +14,10 @@ Build-Depends: debhelper-compat (= 13),
python3-pandas,
python3-skbio (>= 0.5.8-2exp1~),
libjs-jquery-datatables,
- qiime (>= 2023.9),
- q2templates (>= 2023.9),
- q2-quality-filter (>= 2023.9),
- q2-types (>= 2023.9)
+ qiime (>= 2024.2),
+ q2templates (>= 2024.2),
+ q2-quality-filter (>= 2024.2),
+ q2-types (>= 2024.2)
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/q2-metadata
Vcs-Git: https://salsa.debian.org/med-team/q2-metadata.git
@@ -35,9 +35,9 @@ Depends: ${shlibs:Depends},
python3-skbio (>= 0.5.8-2exp1~),
libjs-jquery-datatables,
qiime (>= 2022.11.1),
- q2templates (>= 2023.9),
- q2-quality-filter (>= 2023.9),
- q2-types (>= 2023.9)
+ q2templates (>= 2024.2),
+ q2-quality-filter (>= 2024.2),
+ q2-types (>= 2024.2)
Description: QIIME 2 plugin for working with and visualizing Metadata
QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
=====================================
debian/tests/control
=====================================
@@ -1,3 +1,3 @@
Tests: run-unit-test
-Depends: @, python3-pytest-cov
+Depends: @, python3-pytest-cov, python3-all
Restrictions: allow-stderr
=====================================
debian/tests/run-unit-test
=====================================
@@ -18,4 +18,7 @@ if [ ! -f
/usr/lib/python3/dist-packages/pytest_cov/__init__.py ] ; then
fi
# Run build-time tests
-py.test-3 --cov=${pkg}
+for py in $(py3versions -s 2> /dev/null)
+do
+ ${py} -m pytest -v --cov=${pkg}
+done
=====================================
q2_metadata/_version.py
=====================================
@@ -23,9 +23,9 @@ def get_keywords():
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
- git_refnames = " (tag: 2023.9.0, Release-2023.9)"
- git_full = "0fa9efe8c8de6920f78e211c51e76157eb990022"
- git_date = "2023-10-03 22:00:18 +0000"
+ git_refnames = " (tag: 2024.2.0, Release-2024.2)"
+ git_full = "ad67a7ff4caab35b0b7aa265ce3f446d126b0b7c"
+ git_date = "2024-02-16 21:58:48 +0000"
keywords = {"refnames": git_refnames, "full": git_full, "date": git_date}
return keywords
View it on GitLab:
https://salsa.debian.org/med-team/q2-metadata/-/compare/c12f8dd8b765349ce5900ee9d9efab1cc82b4f30...2f7254e9b2ab0411d50ad78196dc2dc6080605b3
--
View it on GitLab:
https://salsa.debian.org/med-team/q2-metadata/-/compare/c12f8dd8b765349ce5900ee9d9efab1cc82b4f30...2f7254e9b2ab0411d50ad78196dc2dc6080605b3
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