Nilesh Patra pushed to branch fiddle-salsa at Debian Med / blasr
Commits:
502cd60e by Nilesh Patra at 2024-12-08T15:17:16+05:30
Build with updated pbseqlib
- - - - -
2 changed files:
- debian/control
- debian/salsa-ci.yml
Changes:
=====================================
debian/control
=====================================
@@ -16,7 +16,7 @@ Build-Depends: debhelper-compat (= 13),
libpbdata-dev,
libpbcopper-dev,
libgtest-dev,
- libblasr-dev (>= 5.3.4+dfsg-4~)
+ libblasr-dev (>= 5.3.5+dfsg-9~)
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/blasr
Vcs-Git: https://salsa.debian.org/med-team/blasr.git
@@ -27,7 +27,7 @@ Package: blasr
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
- libpbseq (>= 5.3.5+dfsg-4~)
+ libpbseq (>= 5.3.5+dfsg-9~)
Description: mapping single-molecule sequencing reads
Basic local alignment with successive refinement (BLASR) is a method
for mapping single-molecule sequencing reads against a reference genome.
=====================================
debian/salsa-ci.yml
=====================================
@@ -1,8 +1,11 @@
----
include:
- - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
- -
https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
-
- #i386 CI disabled due to unavailable libpb*-dev for i386 architecture
+- https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml
+
variables:
- SALSA_CI_DISABLE_BUILD_PACKAGE_I386: "true"
+ SALSA_CI_ENABLE_WRAP_AND_SORT: 'true'
+ SALSA_CI_WRAP_AND_SORT_ARGS: '-asbkt'
+ SALSA_CI_DISABLE_APTLY: 0
+
+before_script:
+ - echo "deb [trusted=yes]
https://salsa.debian.org/med-team/pbseqlib/-/jobs/6719829/artifacts/raw/aptly
unstable main" | tee --append /etc/apt/sources.list.d/add.list
+ - apt-get update && eatmydata apt-get upgrade -y
View it on GitLab:
https://salsa.debian.org/med-team/blasr/-/commit/502cd60ec57ec2eb953abb9a308600201f3df3f1
--
View it on GitLab:
https://salsa.debian.org/med-team/blasr/-/commit/502cd60ec57ec2eb953abb9a308600201f3df3f1
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