Étienne Mollier pushed to branch master at Debian Med / libbpp-seq-omics
Commits: 724651bb by Étienne Mollier at 2025-09-30T19:58:34+02:00 cmake-4.patch: new: bump minimum cmake to 3.10. Closes: #1113122 - - - - - 53f37150 by Étienne Mollier at 2025-09-30T19:59:24+02:00 d/control: declare compliance to standards version 4.7.2. - - - - - 10b131ad by Étienne Mollier at 2025-09-30T19:59:57+02:00 d/s/lintian-overrides: glob d/control line number. - - - - - abc555b5 by Étienne Mollier at 2025-09-30T20:00:21+02:00 d/control: drop redundant Rules-Requires-Root: no. - - - - - 83a626e1 by Étienne Mollier at 2025-09-30T20:01:20+02:00 d/copyright: remove the old FSF address. - - - - - 012b7c41 by Étienne Mollier at 2025-09-30T20:01:57+02:00 d/watch: bump to v5 Github template. - - - - - cd320ef1 by Étienne Mollier at 2025-09-30T20:02:44+02:00 d/changelog: ready for upload to unstable. - - - - - 7 changed files: - debian/changelog - debian/control - debian/copyright - + debian/patches/cmake-4.patch - debian/patches/series - debian/source/lintian-overrides - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,15 @@ +libbpp-seq-omics (2.4.1-13) unstable; urgency=medium + + * Team upload. + * cmake-4.patch: new: bump minimum cmake to 3.10. (Closes: #1113122) + * d/control: declare compliance to standards version 4.7.2. + * d/s/lintian-overrides: glob d/control line number. + * d/control: drop redundant Rules-Requires-Root: no. + * d/copyright: remove the old FSF address. + * d/watch: bump to v5 Github template. + + -- Étienne Mollier <[email protected]> Tue, 30 Sep 2025 20:02:26 +0200 + libbpp-seq-omics (2.4.1-12) unstable; urgency=medium * Since every GCC version bump ends up in a bug caused by the need to ===================================== debian/control ===================================== @@ -8,11 +8,10 @@ Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), libbpp-seq-dev -Standards-Version: 4.7.0 +Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/libbpp-seq-omics Vcs-Git: https://salsa.debian.org/med-team/libbpp-seq-omics.git Homepage: http://biopp.univ-montp2.fr/wiki/index.php/Main_Page -Rules-Requires-Root: no Package: libbpp-seq-omics-dev Architecture: any ===================================== debian/copyright ===================================== @@ -24,10 +24,6 @@ License: GPL-2+ but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - . - You should have received a copy of the GNU General Public License - along with this package; if not, write to the Free Software - Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the complete text of the GNU General Public License can be found in `/usr/share/common-licenses/GPL-2'. ===================================== debian/patches/cmake-4.patch ===================================== @@ -0,0 +1,20 @@ +Description: bump cmake_minimum_required to 3.10. + This fixes errors and warnings caused by the version too low with cmake + 4 onwards. +Author: Étienne Mollier <[email protected]> +Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1113122 +Forwarded: no +Last-Update: 2025-09-30 +--- +This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ +--- libbpp-seq-omics.orig/CMakeLists.txt ++++ libbpp-seq-omics/CMakeLists.txt +@@ -5,7 +5,7 @@ + # Francois Gindraud (2017) + # Created: 30/07/2012 + +-cmake_minimum_required (VERSION 2.8.11) ++cmake_minimum_required (VERSION 3.10) + project (bpp-seq-omics CXX) + + # Compile options ===================================== debian/patches/series ===================================== @@ -1,2 +1,3 @@ spelling unforce-cxxflags.patch +cmake-4.patch ===================================== debian/source/lintian-overrides ===================================== @@ -1,2 +1,2 @@ # false-positive from the t64 transition -libbpp-seq-omics source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-seq-omics3t64 -> libbpp-seq-omics3 [debian/control:37] +libbpp-seq-omics source: version-substvar-for-external-package Conflicts ${source:Version} libbpp-seq-omics3t64 -> libbpp-seq-omics3 [debian/control:*] ===================================== debian/watch ===================================== @@ -1,4 +1,5 @@ -version=4 +Version: 5 -opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE@-$1.tar.gz%" \ - https://github.com/BioPP/bpp-seq-omics/tags .*/v(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz) +Template: Github +Owner: BioPP +Project: bpp-seq-omics View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq-omics/-/compare/1ade411f3032c57bd2a77c404d1c99a40ec20c28...cd320ef17bd5d4a6a5aaf8cfa2775fd67df6bf51 -- View it on GitLab: https://salsa.debian.org/med-team/libbpp-seq-omics/-/compare/1ade411f3032c57bd2a77c404d1c99a40ec20c28...cd320ef17bd5d4a6a5aaf8cfa2775fd67df6bf51 You're receiving this email because of your account on salsa.debian.org.
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