Alexandre Detiste pushed to branch master at Debian Med / srst2
Commits: cea9d162 by Alexandre Detiste at 2025-12-13T04:10:15+01:00 rewrite d/rules with newer & shorter syntax - - - - - e4cf9267 by Alexandre Detiste at 2025-12-13T04:10:38+01:00 bump Standards-Version to 4.7.2 - - - - - eb7dcb7e by Alexandre Detiste at 2025-12-13T04:11:04+01:00 drop "Rules-Requires-Root: no": it is now the default - - - - - 3dd7c4e2 by Alexandre Detiste at 2025-12-13T04:11:25+01:00 release - - - - - 3 changed files: - debian/changelog - debian/control - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +srst2 (0.2.0-14) unstable; urgency=medium + + * Team upload. + * Autopkgtest do not need python3-mock + * Rewrite d/rules with newer & shorter syntax + * Bump Standards-Version to 4.7.2 + * Drop "Rules-Requires-Root: no": it is now the default + + -- Alexandre Detiste <[email protected]> Sat, 13 Dec 2025 04:11:08 +0100 + srst2 (0.2.0-13) unstable; urgency=medium * syntax-warning.patch: new: fix Python SyntaxWarning. (Closes: #1087097) ===================================== debian/control ===================================== @@ -13,11 +13,10 @@ Build-Depends: debhelper-compat (= 13), python3-scipy <!nocheck>, bowtie2 <!nocheck>, samtools <!nocheck> -Standards-Version: 4.7.0 +Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/srst2 Vcs-Git: https://salsa.debian.org/med-team/srst2.git Homepage: https://katholt.github.io/srst2/ -Rules-Requires-Root: no Package: srst2 Architecture: any ===================================== debian/rules ===================================== @@ -7,13 +7,11 @@ include /usr/share/dpkg/default.mk %: dh $@ --buildsystem=pybuild -override_dh_auto_build: - dh_auto_build +execute_after_dh_auto_build: markdown README.md > README.html markdown database_clustering/README.md > database_clustering_README.html -override_dh_install: - dh_install +execute_after_dh_install: mv debian/$(DEB_SOURCE)/usr/lib/*/dist-packages/$(DEB_SOURCE)/* debian/$(DEB_SOURCE)/usr/share/$(DEB_SOURCE) rm -rf debian/*/usr/bin/*.py debian/$(DEB_SOURCE)/usr/lib/*/dist-packages/ # fix line endings to make sure Python3 interpreter will be found @@ -21,8 +19,7 @@ override_dh_install: sed -i '1s:^#!/usr/local.*python[.0-9]*$$:#!/usr/bin/python3:' debian/$(DEB_SOURCE)/usr/share/$(DEB_SOURCE)/qsub_srst2.py find debian -name __pycache__ -type d | xargs rm -rf -override_dh_fixperms: - dh_fixperms +execute_after_dh_fixperms: chmod +x debian/$(DEB_SOURCE)/usr/share/srst2/database_clustering/get_genus_vfdb.sh chmod +x debian/$(DEB_SOURCE)/usr/share/srst2/database_clustering/get_all_vfdb.sh chmod -x debian/$(DEB_SOURCE)/usr/share/srst2/database_clustering/align_plot_tree_min3.py @@ -35,6 +32,5 @@ ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) cd tests && python3 test_slurm_srst2.py && python3 test_srst2.py endif -override_dh_installdocs: - dh_installdocs +execute_after_dh_installdocs: sed -i "s?sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__).*scripts.*?sys.path.append(os.path.abspath('/usr/share/$(DEB_SOURCE)'))?" debian/$(DEB_SOURCE)/usr/share/doc/$(DEB_SOURCE)/tests/*.py View it on GitLab: https://salsa.debian.org/med-team/srst2/-/compare/cb8e6b64a87dc4276c5f034b5a546e7d6f5fb809...3dd7c4e2697689c48a1786d1582334488024ae92 -- View it on GitLab: https://salsa.debian.org/med-team/srst2/-/compare/cb8e6b64a87dc4276c5f034b5a546e7d6f5fb809...3dd7c4e2697689c48a1786d1582334488024ae92 You're receiving this email because of your account on salsa.debian.org.
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