Andreas Tille pushed to branch master at Debian Med / busco
Commits: ad3df6ab by Andreas Tille at 2026-06-01T16:29:25+02:00 d/watch: version=5 - - - - - d039b458 by Andreas Tille at 2026-06-01T16:29:39+02:00 New upstream version 6.0.0 - - - - - 641c32b6 by Andreas Tille at 2026-06-01T16:29:39+02:00 New upstream version - - - - - 5b84f54f by Andreas Tille at 2026-06-01T16:29:40+02:00 Update upstream source from tag 'upstream/6.0.0' Update to upstream version '6.0.0' with Debian dir 746d7e646fd5e909a742df7c80b1ac6aeecf7432 - - - - - 5bfec549 by Andreas Tille at 2026-06-01T16:29:40+02:00 Standards-Version: 4.7.4 (routine-update) - - - - - e986eb8b by Andreas Tille at 2026-06-01T16:29:44+02:00 Changes made by cme - - - - - 3c502a6c by Andreas Tille at 2026-06-01T16:29:54+02:00 debputy lint --auto-fix (routine-update) - - - - - 49a2c91d by Andreas Tille at 2026-06-01T16:43:03+02:00 Refresh patches - - - - - 05009ba0 by Andreas Tille at 2026-06-01T17:18:47+02:00 Adapt test to new upstream version - - - - - f43e39ae by Andreas Tille at 2026-06-01T17:19:19+02:00 DEP3 - - - - - 51 changed files: - CHANGELOG - LICENSE - README.md - bin/busco - config/config.ini - debian/changelog - debian/control - debian/patches/find-bbmap-instead-of-bbtools.patch - debian/patches/fix-and-disable-tests.patch - − debian/patches/python3.12-syntax.patch - debian/patches/series - debian/rules - debian/watch - − scripts/generate_plot.py - setup.py - src/busco/Actions.py - src/busco/AutoLineage.py - src/busco/BuscoConfig.py - src/busco/BuscoDownloadManager.py - src/busco/BuscoLogger.py - src/busco/BuscoPlacer.py - + src/busco/BuscoPlot.py - src/busco/BuscoRunner.py - src/busco/ConfigManager.py - src/busco/Exceptions.py - src/busco/__init__.py - src/busco/_version.py - src/busco/analysis/Analysis.py - src/busco/analysis/BuscoAnalysis.py - src/busco/analysis/GeneSetAnalysis.py - src/busco/analysis/GenomeAnalysis.py - src/busco/analysis/TranscriptomeAnalysis.py - src/busco/busco_tools/Toolset.py - src/busco/busco_tools/augustus.py - src/busco/busco_tools/base.py - src/busco/busco_tools/bbtools.py - src/busco/busco_tools/blast.py - src/busco/busco_tools/hmmer.py - src/busco/busco_tools/metaeuk.py - src/busco/busco_tools/miniprot.py - src/busco/busco_tools/prodigal.py - src/busco/busco_tools/sepp.py - src/busco/run_BUSCO.py - test_data/bacteria/expected_log.txt - test_data/eukaryota/expected_log.txt - tests/unittest_runner.py - tests/unittests/AutoLineage_unittests.py - tests/unittests/BuscoConfig_unittests.py - tests/unittests/ConfigManager_unittests.py - tests/unittests/GenomeAnalysis_unittests.py - tests/unittests/run_BUSCO_unittests.py The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/busco/-/compare/c3476492e7351affa7e9059ef533da365a4b8a1f...f43e39ae70075b52f9e85281ffa01808bdb2acb1 -- View it on GitLab: https://salsa.debian.org/med-team/busco/-/compare/c3476492e7351affa7e9059ef533da365a4b8a1f...f43e39ae70075b52f9e85281ffa01808bdb2acb1 You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
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