Andreas Tille pushed to branch master at Debian Med / sniffles


Commits:
91315fe1 by Andreas Tille at 2026-07-07T21:26:15+02:00
New upstream version 2.8.0
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f95a25b1 by Andreas Tille at 2026-07-07T21:26:15+02:00
New upstream version

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38c70cf9 by Andreas Tille at 2026-07-07T21:26:34+02:00
Update upstream source from tag 'upstream/2.8.0'

Update to upstream version '2.8.0'
with Debian dir 55e1a419806ec997afc7f64b25353c1ab1b865ed
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7e71077d by Andreas Tille at 2026-07-07T21:26:34+02:00
Standards-Version: 4.7.4 (routine-update)

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d8e41c25 by Andreas Tille at 2026-07-07T21:26:55+02:00
Changes made by cme

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84ece085 by Andreas Tille at 2026-07-07T21:26:59+02:00
Drop 'Rules-Requires-Root: no' from d/control (routine-update)

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8bea4d97 by Andreas Tille at 2026-07-07T21:34:05+02:00
New upstream version closes bug

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ca181eaa by Andreas Tille at 2026-07-07T21:36:34+02:00
d/watch: version=5

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db2e850f by Andreas Tille at 2026-07-07T21:37:11+02:00
d/copyright: No Files-Excluded needed any more

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510d52bb by Andreas Tille at 2026-07-07T21:45:14+02:00
Team upload to unstable

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31 changed files:

- README.md
- debian/changelog
- debian/control
- debian/copyright
- debian/watch
- setup.cfg
- setup.py
- src/sniffles/cluster.py
- src/sniffles/config.py
- src/sniffles/genotyping.py
- src/sniffles/leadprov.py
- + src/sniffles/local_asm.py
- src/sniffles/parallel.py
- src/sniffles/postprocessing.py
- src/sniffles/region.py
- src/sniffles/result.py
- src/sniffles/snf.py
- src/sniffles/sniffles
- src/sniffles/sv.py
- src/sniffles/util.py
- src/sniffles/utils/resmon.py
- src/sniffles/vcf.py
- + src/tests/common.py
- + src/tests/data/hg002.bam
- + src/tests/data/hg002.bam.csi
- + src/tests/data/hg008.bam
- + src/tests/data/hg008.bam.csi
- + src/tests/test_bnd.py
- + src/tests/test_bnd_leads.py
- + src/tests/test_params.py
- src/tests/test_vcf.py


The diff was not included because it is too large.


View it on GitLab: 
https://salsa.debian.org/med-team/sniffles/-/compare/771fe2cd79a89c50487a46d103fb79b3d47720bc...510d52bbba081ec1b6a0128410f0590d3d9f6ae6

-- 
View it on GitLab: 
https://salsa.debian.org/med-team/sniffles/-/compare/771fe2cd79a89c50487a46d103fb79b3d47720bc...510d52bbba081ec1b6a0128410f0590d3d9f6ae6
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