Andreas Tille pushed to branch master at Debian Med / pbseqlib
Commits: 5226d6c7 by Andreas Tille at 2026-08-12T13:41:50+02:00 Build with gcc-16 Closes: #1133604 - - - - - 4 changed files: - debian/changelog - debian/copyright - + debian/patches/gcc-16.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +pbseqlib (5.3.5+dfsg-12) UNRELEASED; urgency=medium + + * Build with gcc-16 + Closes: #1133604 + + -- Andreas Tille <[email protected]> Wed, 12 Aug 2026 13:41:31 +0200 + pbseqlib (5.3.5+dfsg-11) unstable; urgency=medium * Team upload. ===================================== debian/copyright ===================================== @@ -23,7 +23,7 @@ Files: pbdata/MD5Utils.cpp pbdata/MD5Utils.hpp Copyright: 1991-1992 RSA Data Security, Inc. 1995 Mordechai T. Abzug -License: RSA +License: PacBio-BSD-3-Clause| BSD-3-clause and/or NTP LICENSE Files: debian/* Copyright: 2016-2017 Afif Elghraoui <[email protected]> ===================================== debian/patches/gcc-16.patch ===================================== @@ -0,0 +1,17 @@ +Author: Andreas Tille <[email protected]> +Last-Update: 2026-08-12 +Description: operator== is bool not int in C++20 which is strictly enforced in GCC 16 +Bug-Debian: https://bugs.debian.org/1133604 + (The bug was filed against package pbdagcon but it was a result of this header file) + +--- a/alignment/tuples/DNATuple.hpp ++++ b/alignment/tuples/DNATuple.hpp +@@ -75,7 +75,7 @@ public: + return 0; + } + +- int operator==(const PositionDNATuple &pTuple) const ++ bool operator==(const PositionDNATuple &pTuple) const + { + return tuple == pTuple.tuple and pos == pTuple.pos; + } ===================================== debian/patches/series ===================================== @@ -5,3 +5,4 @@ static+shared_lib.patch gcc-13.patch pbbam_2.3.0 gcc-14.patch +gcc-16.patch View it on GitLab: https://salsa.debian.org/med-team/pbseqlib/-/commit/5226d6c78ba72b3e448621b1554c8fbbee29628e -- View it on GitLab: https://salsa.debian.org/med-team/pbseqlib/-/commit/5226d6c78ba72b3e448621b1554c8fbbee29628e You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
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