Andreas Tille pushed to branch master at Debian Med / jellyfish1
Commits: 94d5a3c8 by Andreas Tille at 2026-08-12T16:51:23+02:00 Standards-Version: 4.7.4 (routine-update) - - - - - cc3955ed by Andreas Tille at 2026-08-12T17:01:46+02:00 Changes made by cme - - - - - 056e3898 by Andreas Tille at 2026-08-12T17:01:48+02:00 Drop 'Rules-Requires-Root: no' from d/control (routine-update) - - - - - 0b344fad by Andreas Tille at 2026-08-12T16:02:04+01:00 Reformat the Last-Update date as ISO YYYY-MM-DD. Changes-By: lintian-brush Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/man] Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/arm64.patch] Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/mips.patch] See-also: https://lintian.debian.org/tags/invalid-dep3-format-patch-wrong-last-update.html - - - - - ff7212b1 by Andreas Tille at 2026-08-12T17:02:09+02:00 debputy lint --auto-fix (routine-update) - - - - - 0c5de090 by Andreas Tille at 2026-08-12T17:16:03+02:00 Add lrc.config - - - - - 5f82a8c9 by Andreas Tille at 2026-08-12T17:17:28+02:00 Upload to unstable - - - - - 6 changed files: - debian/changelog - debian/control - + debian/lrc.config - debian/patches/arm64.patch - debian/patches/man - debian/patches/mips.patch Changes: ===================================== debian/changelog ===================================== @@ -1,10 +1,17 @@ -jellyfish1 (1.1.11-11) UNRELEASED; urgency=medium +jellyfish1 (1.1.11-11) unstable; urgency=medium * Build with gcc-16 Closes: #1143666 * d/watch: version=5 - - -- Andreas Tille <[email protected]> Wed, 12 Aug 2026 16:50:17 +0200 + * Standards-Version: 4.7.4 (routine-update) + * Reflow Uploaders field (cme) + * Remove Priority field (cme) + * Drop 'Rules-Requires-Root: no' from d/control (routine-update) + * Reformat the Last-Update date as ISO YYYY-MM-DD. + * debputy lint --auto-fix (routine-update) + * Add lrc.config + + -- Andreas Tille <[email protected]> Wed, 12 Aug 2026 17:16:06 +0200 jellyfish1 (1.1.11-10) unstable; urgency=medium ===================================== debian/control ===================================== @@ -1,21 +1,23 @@ Source: jellyfish1 +Standards-Version: 4.7.4 Maintainer: Debian Med Packaging Team <[email protected]> -Uploaders: Shaun Jackman <[email protected]>, - Andreas Tille <[email protected]> +Uploaders: + Shaun Jackman <[email protected]>, + Andreas Tille <[email protected]>, Section: science -Priority: optional -Build-Depends: debhelper-compat (= 13) -Standards-Version: 4.7.0 +Build-Depends: + debhelper-compat (= 14), Vcs-Browser: https://salsa.debian.org/med-team/jellyfish1 Vcs-Git: https://salsa.debian.org/med-team/jellyfish1.git Homepage: https://www.cbcb.umd.edu/software/jellyfish/ -Rules-Requires-Root: no Package: jellyfish1 -Architecture: amd64 arm64 loong64 mips64el ppc64el hppa ia64 kfreebsd-amd64 riscv64 -Depends: ${shlibs:Depends}, - ${misc:Depends} -Enhances: kraken +Architecture: amd64 arm64 loong64 mips64el ppc64el hppa ia64 freebsd-amd64 riscv64 +Depends: + ${shlibs:Depends}, + ${misc:Depends}, +Enhances: + kraken, Description: count k-mers in DNA sequences JELLYFISH is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences ===================================== debian/lrc.config ===================================== @@ -0,0 +1,9 @@ +aclocal.m4 +configure +install-sh +ltmain.sh +m4/libtool.m4 +m4/lt~obsolete.m4 +m4/ltoptions.m4 +m4/ltsugar.m4 +m4/ltversion.m4 ===================================== debian/patches/arm64.patch ===================================== @@ -1,5 +1,5 @@ Author: Edmund Grimley Evans <[email protected]> -Last-Update: Thu, 7 Sep 2017 09:50:56 +0100 +Last-Update: 2017-09-07 Bug-Debian: https://bugs.debian.org/874549 Description: Enable arm64 (Thanks for the patch to Edmund Grimley Evans ===================================== debian/patches/man ===================================== @@ -1,5 +1,5 @@ Author: Andreas Tille <[email protected]> -Last-Update: 2012-03-31 00:26:48 +0200 +Last-Update: 2012-03-31 Description: Fix manpage --- jellyfish.orig/doc/jellyfish.man ===================================== debian/patches/mips.patch ===================================== @@ -1,5 +1,5 @@ Author: Aaron M. Ucko <[email protected]> -Last-Update: Sun, 10 Sep 2017 14:45:11 -0400 +Last-Update: 2017-09-10 Bug-Debian: https://bugs.debian.org/875328 Description: Enable building on architectures mips(el) and others by linking libatomic if needed View it on GitLab: https://salsa.debian.org/med-team/jellyfish1/-/compare/86a95567f345db3da4de69a0ae4b67952b820e48...5f82a8c9aab12d559c972472bac4a759af0c75d1 -- View it on GitLab: https://salsa.debian.org/med-team/jellyfish1/-/compare/86a95567f345db3da4de69a0ae4b67952b820e48...5f82a8c9aab12d559c972472bac4a759af0c75d1 You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
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