Author: osallou Date: 2012-09-21 15:58:05 +0000 (Fri, 21 Sep 2012) New Revision: 12262
Added: trunk/packages/circos/tags/0.62.1-1/ trunk/packages/circos/tags/0.62.1-1/debian/changelog trunk/packages/circos/tags/0.62.1-1/debian/circos.examples trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples Removed: trunk/packages/circos/tags/0.62.1-1/debian/changelog trunk/packages/circos/tags/0.62.1-1/debian/circos.examples trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples Log: [svn-buildpackage] Tagging circos 0.62.1-1 Deleted: trunk/packages/circos/tags/0.62.1-1/debian/changelog =================================================================== --- trunk/packages/circos/trunk/debian/changelog 2012-09-21 15:00:45 UTC (rev 12258) +++ trunk/packages/circos/tags/0.62.1-1/debian/changelog 2012-09-21 15:58:05 UTC (rev 12262) @@ -1,47 +0,0 @@ -circos (0.62.1) UNRELEASED; urgency=low - - * New upstream release - - -- Olivier Sallou <osal...@debian.org> Fri, 21 Sep 2012 17:00:12 +0200 - -circos (0.61-3) unstable; urgency=low - - * debian/control: add missing dependency (Closes: #684977). - - -- Olivier Sallou <osal...@debian.org> Wed, 15 Aug 2012 12:46:11 +0200 - -circos (0.61-2) unstable; urgency=low - - [ Olivier Sallou ] - * debian/control: - - Update description (Closes: #682802). - - Rename otf-symbols-circos to fonts-circos-symbols to fit the Font - Packages Naming Policy. - - Move to Standards 3.9.3 - - -- Olivier Sallou <osal...@debian.org> Thu, 14 Jun 2012 13:46:15 +0200 - -circos (0.61-1) unstable; urgency=low - - [ Olivier Sallou ] - * New upstream release - - [ Charles Plessy ] - * renamed debian/upstream-metadata.yaml to debian/upstream - - [ Andreas Tille ] - * debian/upstream: enhanced citation information - - -- Olivier Sallou <osal...@debian.org> Thu, 14 Jun 2012 12:56:33 +0200 - -circos (0.55-2) unstable; urgency=low - - * Add pre-depends on dpkg to support xz compression (required for Ubuntu) - - -- Olivier Sallou <olivier.sal...@irisa.fr> Wed, 19 Oct 2011 14:16:18 +0200 - -circos (0.55-1) unstable; urgency=low - - * First debian import (Closes: #632174) - - -- Olivier Sallou <olivier.sal...@irisa.fr> Wed, 29 Jun 2011 12:04:57 +0200 Copied: trunk/packages/circos/tags/0.62.1-1/debian/changelog (from rev 12260, trunk/packages/circos/trunk/debian/changelog) =================================================================== --- trunk/packages/circos/tags/0.62.1-1/debian/changelog (rev 0) +++ trunk/packages/circos/tags/0.62.1-1/debian/changelog 2012-09-21 15:58:05 UTC (rev 12262) @@ -0,0 +1,47 @@ +circos (0.62.1-1) unstable; urgency=low + + * New upstream release + + -- Olivier Sallou <osal...@debian.org> Fri, 21 Sep 2012 17:00:12 +0200 + +circos (0.61-3) unstable; urgency=low + + * debian/control: add missing dependency (Closes: #684977). + + -- Olivier Sallou <osal...@debian.org> Wed, 15 Aug 2012 12:46:11 +0200 + +circos (0.61-2) unstable; urgency=low + + [ Olivier Sallou ] + * debian/control: + - Update description (Closes: #682802). + - Rename otf-symbols-circos to fonts-circos-symbols to fit the Font + Packages Naming Policy. + - Move to Standards 3.9.3 + + -- Olivier Sallou <osal...@debian.org> Thu, 14 Jun 2012 13:46:15 +0200 + +circos (0.61-1) unstable; urgency=low + + [ Olivier Sallou ] + * New upstream release + + [ Charles Plessy ] + * renamed debian/upstream-metadata.yaml to debian/upstream + + [ Andreas Tille ] + * debian/upstream: enhanced citation information + + -- Olivier Sallou <osal...@debian.org> Thu, 14 Jun 2012 12:56:33 +0200 + +circos (0.55-2) unstable; urgency=low + + * Add pre-depends on dpkg to support xz compression (required for Ubuntu) + + -- Olivier Sallou <olivier.sal...@irisa.fr> Wed, 19 Oct 2011 14:16:18 +0200 + +circos (0.55-1) unstable; urgency=low + + * First debian import (Closes: #632174) + + -- Olivier Sallou <olivier.sal...@irisa.fr> Wed, 29 Jun 2011 12:04:57 +0200 Deleted: trunk/packages/circos/tags/0.62.1-1/debian/circos.examples =================================================================== --- trunk/packages/circos/trunk/debian/circos.examples 2012-09-21 15:00:45 UTC (rev 12258) +++ trunk/packages/circos/tags/0.62.1-1/debian/circos.examples 2012-09-21 15:58:05 UTC (rev 12262) @@ -1 +0,0 @@ -example/* Copied: trunk/packages/circos/tags/0.62.1-1/debian/circos.examples (from rev 12261, trunk/packages/circos/trunk/debian/circos.examples) =================================================================== --- trunk/packages/circos/tags/0.62.1-1/debian/circos.examples (rev 0) +++ trunk/packages/circos/tags/0.62.1-1/debian/circos.examples 2012-09-21 15:58:05 UTC (rev 12262) @@ -0,0 +1,2 @@ +example/* +data Deleted: trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc =================================================================== --- trunk/packages/circos/trunk/debian/patches/configpath_add_etc 2012-09-21 15:00:45 UTC (rev 12258) +++ trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc 2012-09-21 15:58:05 UTC (rev 12262) @@ -1,32 +0,0 @@ -Description: Add Debian directories in search path -Author: Olivier Sallou <olivier.sal...@irisa.fr> -Last-Update: 2011-08-01 ---- a/lib/Circos/Configuration.pm -+++ b/lib/Circos/Configuration.pm -@@ -569,6 +569,7 @@ - } - - my @configpath = ( -+ "/etc/circos", - dirname($file), - dirname($file)."/etc", - "$FindBin::RealBin/etc", ---- a/lib/Circos/Utils.pm -+++ b/lib/Circos/Utils.pm -@@ -429,7 +429,7 @@ - %params = @_; - } - # look for the file in various directories -- my @dir_1 = (getcwd,$FindBin::RealBin); -+ my @dir_1 = (getcwd,$FindBin::RealBin,"/usr/share/circos"); - my @dir_2 = qw(. .. ../..); - my @dir_3 = qw(. etc data); - ---- a/etc/makehuesteps -+++ b/etc/makehuesteps -@@ -1,4 +1,4 @@ --#!/bin/env perl -+#!/usr/bin/env perl - - use strict; - use Math::Round qw(round); Copied: trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc (from rev 12259, trunk/packages/circos/trunk/debian/patches/configpath_add_etc) =================================================================== --- trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc (rev 0) +++ trunk/packages/circos/tags/0.62.1-1/debian/patches/configpath_add_etc 2012-09-21 15:58:05 UTC (rev 12262) @@ -0,0 +1,33 @@ +Description: Add Debian directories in search path +Author: Olivier Sallou <olivier.sal...@irisa.fr> +Last-Update: 2012-09-21 +Forwarded: not-needed +--- a/lib/Circos/Configuration.pm ++++ b/lib/Circos/Configuration.pm +@@ -591,6 +591,7 @@ + } + + my @configpath = ( ++ "/etc/circos", + dirname($file), + dirname($file)."/etc", + "$FindBin::RealBin/etc", +--- a/lib/Circos/Utils.pm ++++ b/lib/Circos/Utils.pm +@@ -430,7 +430,7 @@ + } + + # look for the file in various directories +- my @dir_1 = (getcwd,$FindBin::RealBin); ++ my @dir_1 = (getcwd,$FindBin::RealBin,"/usr/share/circos"); + my @dir_2 = qw(. .. ../.. ../../..); + my @dir_3 = qw(. etc data); + +--- a/etc/makehuesteps ++++ b/etc/makehuesteps +@@ -1,4 +1,4 @@ +-#!/bin/env perl ++#!/usr/bin/env perl + + use strict; + use Math::Round qw(round); Deleted: trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples =================================================================== --- trunk/packages/circos/trunk/debian/patches/fix_examples 2012-09-21 15:00:45 UTC (rev 12258) +++ trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples 2012-09-21 15:58:05 UTC (rev 12262) @@ -1,40 +0,0 @@ -Subject: change path to conf file for examples -Description: etc sub directory is hard coded - in example conf files. In Debian conf files are - in /etc/circos. This path is already added to search - path. -Author: Olivier Sallou <osal...@debian.org> -Last-Updated: 14/06/12 ---- a/example/etc/circos.conf -+++ b/example/etc/circos.conf -@@ -246,16 +246,16 @@ - <<include ticks.conf>> - - <image> --<<include etc/image.conf>> -+<<include image.conf>> - </image> - --# includes etc/colors.conf --# etc/fonts.conf --# etc/patterns.conf --<<include etc/colors_fonts_patterns.conf>> -+# includes colors.conf -+# fonts.conf -+# patterns.conf -+<<include colors_fonts_patterns.conf>> - - # system and debug settings --<<include etc/housekeeping.conf>> -+<<include housekeeping.conf>> - - anti_aliasing* = no - ---- a/example/run -+++ b/example/run -@@ -1,4 +1,4 @@ - #!/bin/bash - --../bin/circos -conf etc/circos.conf -debug_group summary,timer,textplace > run.out -+circos -conf etc/circos.conf -debug_group summary,timer,textplace > run.out - Copied: trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples (from rev 12259, trunk/packages/circos/trunk/debian/patches/fix_examples) =================================================================== --- trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples (rev 0) +++ trunk/packages/circos/tags/0.62.1-1/debian/patches/fix_examples 2012-09-21 15:58:05 UTC (rev 12262) @@ -0,0 +1,41 @@ +Subject: change path to conf file for examples +Description: etc sub directory is hard coded + in example conf files. In Debian conf files are + in /etc/circos. This path is already added to search + path. +Author: Olivier Sallou <osal...@debian.org> +Last-Updated: 2012-09-21 +Forwarded: not-needed +--- a/example/etc/circos.conf ++++ b/example/etc/circos.conf +@@ -248,16 +248,16 @@ + <<include ticks.conf>> + + <image> +-<<include etc/image.conf>> ++<<include image.conf>> + </image> + +-# includes etc/colors.conf +-# etc/fonts.conf +-# etc/patterns.conf +-<<include etc/colors_fonts_patterns.conf>> ++# includes colors.conf ++# fonts.conf ++# patterns.conf ++<<include colors_fonts_patterns.conf>> + + # system and debug settings +-<<include etc/housekeeping.conf>> ++<<include housekeeping.conf>> + + anti_aliasing* = no + +--- a/example/run ++++ b/example/run +@@ -1,4 +1,4 @@ + #!/bin/bash + +-../bin/circos -conf etc/circos.conf -debug_group summary,timer > run.out ++circos -conf etc/circos.conf -debug_group summary,timer > run.out + _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit