This is an automated email from the git hooks/post-receive script. plessy pushed a commit to branch debian/unstable in repository samtools.
commit ab349a269aa8575a64e7d81dd50c5b7a1e1233e4 Author: Joshua Randall <[email protected]> Date: Mon Nov 25 13:41:42 2013 +0000 Fixed GCC section so that read cycle column begins with 1 instead of 0. --- stats.c | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/stats.c b/stats.c index 2bfce6c..7500271 100644 --- a/stats.c +++ b/stats.c @@ -994,7 +994,7 @@ void output_stats(stats_t *stats) uint64_t *ptr = &(stats->acgt_cycles[ibase*4]); uint64_t sum = ptr[0]+ptr[1]+ptr[2]+ptr[3]; if ( ! sum ) continue; - printf("GCC\t%d\t%.2f\t%.2f\t%.2f\t%.2f\n", ibase,100.*ptr[0]/sum,100.*ptr[1]/sum,100.*ptr[2]/sum,100.*ptr[3]/sum); + printf("GCC\t%d\t%.2f\t%.2f\t%.2f\t%.2f\n", ibase+1,100.*ptr[0]/sum,100.*ptr[1]/sum,100.*ptr[2]/sum,100.*ptr[3]/sum); } printf("# Insert sizes. Use `grep ^IS | cut -f 2-` to extract this part. The columns are: pairs total, inward oriented pairs, outward oriented pairs, other pairs\n"); for (isize=0; isize<ibulk; isize++) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/samtools.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
