This is an automated email from the git hooks/post-receive script.
plessy pushed a change to annotated tag 0.2.0-rc5
in repository samtools.
at 6319211 (tag)
tagging b140662dec40bf0f87ce34edf147fbf4cbc9f23d (commit)
replaces 0.2.0-rc4
tagged by John Marshall
on Mon Nov 25 13:32:47 2013 +0000
- Log -----------------------------------------------------------------
Test release RC5
John Marshall (5):
Reinstate bam_iter_read(iter=NULL) reading the whole file
Fix CRLF-style line termination
Free the outer struct last
Merge branch master of git://github.com/leecbaker/samtools
Use floor(x+0.5) instead of C99's round()
Lee Baker (2):
Fix compilation with the Clang compiler.
Fix type mismatches between types in sizeof() in malloc/calloc/realloc
calls. This generates a warning in the clang analyzer, designed to catch
incorrectly sized memory allocations.
Martin Pollard (2):
Fix annoying memset warning and bug in md5.c
Fix error in bam.h comment
Petr Danecek (4):
mpileup: Fix SGB numerical underflow; Output correct samtools version on
output
mpileup: Added forgotten #include
mpileup: Prevent under/overflow of the SGB annotation
mpileup: Updated tests to reflect SGB change
-----------------------------------------------------------------------
This annotated tag includes the following new commits:
new 51467d0 Fix compilation with the Clang compiler.
new 4ce9296 Fix type mismatches between types in sizeof() in
malloc/calloc/realloc calls. This generates a warning in the clang analyzer,
designed to catch incorrectly sized memory allocations.
new d0ebd20 Free the outer struct last
new 92a1cb3 Merge branch master of git://github.com/leecbaker/samtools
new b140662 Use floor(x+0.5) instead of C99's round()
The 5 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
--
Alioth's /usr/local/bin/git-commit-notice on
/srv/git.debian.org/git/debian-med/samtools.git
_______________________________________________
debian-med-commit mailing list
[email protected]
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
