[med-svn] [igraph] 29/31: Merge tag 'upstream/0.7.1'

[Andreas Tille]

This is an automated email from the git hooks/post-receive script.

tille pushed a commit to branch master
in repository igraph.

commit 1b41985f7f44595b83184866932bbf8205166d76
Merge: 850baaf b4326a0
Author: Andreas Tille <ti...@debian.org>
Date:   Tue Aug 19 11:52:22 2014 +0200

    Merge tag 'upstream/0.7.1'
    
    Upstream version 0.7.1

 AUTHORS                                            |     2 +
 COPYING                                            |   340 +
 ChangeLog                                          |     0
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 examples/simple/test.gxl                           |    50 +
 examples/simple/tls1.c                             |    53 +
 examples/simple/tls2.c                             |   230 +
 examples/simple/tls2.out                           |    23 +
 examples/simple/topology.c                         |    63 +
 examples/simple/topology.out                       |     4 +
 examples/simple/vector.c                           |   341 +
 examples/simple/vector.out                         |    26 +
 examples/simple/vector2.c                          |   125 +
 examples/simple/vector2.out                        |    16 +
 examples/simple/vector3.c                          |    46 +
 examples/simple/vector_ptr.c                       |   277 +
 examples/simple/walktrap.c                         |    70 +
 examples/simple/walktrap.out                       |    10 +
 examples/simple/watts_strogatz_game.c              |   112 +
 examples/simple/wikti_en_V_syn.elist               |  8293 +++++++
 igraph.pc                                          |    12 +
 igraph.pc.in                                       |    12 +
 igraph_Info.plist.in                               |    22 +
 include/igraph.h                                   |    97 +
 include/igraph_adjlist.h                           |   238 +
 include/igraph_arpack.h                            |   341 +
 include/igraph_array.h                             |    69 +
 include/igraph_array_pmt.h                         |    51 +
 include/igraph_attributes.h                        |   878 +
 include/igraph_bipartite.h                         |   106 +
 include/igraph_blas.h                              |    72 +
 include/igraph_centrality.h                        |   221 +
 include/igraph_cliques.h                           |    82 +
 include/igraph_cocitation.h                        |    75 +
 include/igraph_cohesive_blocks.h                   |    37 +
 include/igraph_community.h                         |   241 +
 include/igraph_complex.h                           |   111 +
 include/igraph_components.h                        |    69 +
 include/igraph_constants.h                         |   159 +
 include/igraph_constructors.h                      |    85 +
 include/igraph_conversion.h                        |    74 +
 include/igraph_datatype.h                          |    92 +
 include/igraph_dqueue.h                            |    76 +
 include/igraph_dqueue_pmt.h                        |    49 +
 include/igraph_eigen.h                             |   118 +
 include/igraph_epidemics.h                         |    75 +
 include/igraph_error.h                             |   721 +
 include/igraph_flow.h                              |   178 +
 include/igraph_foreign.h                           |    94 +
 include/igraph_games.h                             |   194 +
 include/igraph_graphlets.h                         |    71 +
 include/igraph_heap.h                              |    91 +
 include/igraph_heap_pmt.h                          |    45 +
 include/igraph_hrg.h                               |   123 +
 include/igraph_interface.h                         |    95 +
 include/igraph_interrupt.h                         |   138 +
 include/igraph_iterators.h                         |   410 +
 include/igraph_lapack.h                            |   118 +
 include/igraph_layout.h                            |   253 +
 include/igraph_matching.h                          |    65 +
 include/igraph_matrix.h                            |   107 +
 include/igraph_matrix_pmt.h                        |   234 +
 include/igraph_memory.h                            |    55 +
 include/igraph_microscopic_update.h                |    69 +
 include/igraph_mixing.h                            |    60 +
 include/igraph_motifs.h                            |   104 +
 include/igraph_neighborhood.h                      |    51 +
 include/igraph_nongraph.h                          |   102 +
 include/igraph_operators.h                         |    72 +
 include/igraph_paths.h                             |   135 +
 include/igraph_pmt.h                               |   142 +
 include/igraph_pmt_off.h                           |   158 +
 include/igraph_progress.h                          |   193 +
 include/igraph_psumtree.h                          |    58 +
 include/igraph_qsort.h                             |    46 +
 include/igraph_random.h                            |   129 +
 include/igraph_revolver.h                          |  1200 +
 include/igraph_scg.h                               |   135 +
 include/igraph_separators.h                        |    62 +
 include/igraph_sparsemat.h                         |   264 +
 include/igraph_spmatrix.h                          |   123 +
 include/igraph_stack.h                             |    82 +
 include/igraph_stack_pmt.h                         |    47 +
 include/igraph_statusbar.h                         |   135 +
 include/igraph_structural.h                        |   157 +
 include/igraph_strvector.h                         |   106 +
 include/igraph_threading.h                         |    51 +
 include/igraph_threading.h.in                      |    51 +
 include/igraph_topology.h                          |   290 +
 include/igraph_transitivity.h                      |    73 +
 include/igraph_types.h                             |    99 +
 include/igraph_vector.h                            |   174 +
 include/igraph_vector_pmt.h                        |   265 +
 include/igraph_vector_ptr.h                        |   109 +
 include/igraph_vector_type.h                       |    34 +
 include/igraph_version.h                           |    36 +
 include/igraph_version.h.in                        |    36 +
 include/igraph_visitor.h                           |   141 +
 install-sh                                         |   527 +
 ltmain.sh                                          |  9655 ++++++++
 missing                                            |   215 +
 optional/glpk/amd/amd.h                            |    67 +
 optional/glpk/amd/amd_1.c                          |   181 +
 optional/glpk/amd/amd_2.c                          |  1844 ++
 optional/glpk/amd/amd_aat.c                        |   187 +
 optional/glpk/amd/amd_control.c                    |    64 +
 optional/glpk/amd/amd_defaults.c                   |    38 +
 optional/glpk/amd/amd_dump.c                       |   180 +
 optional/glpk/amd/amd_info.c                       |   120 +
 optional/glpk/amd/amd_internal.h                   |   117 +
 optional/glpk/amd/amd_order.c                      |   203 +
 optional/glpk/amd/amd_post_tree.c                  |   121 +
 optional/glpk/amd/amd_postorder.c                  |   207 +
 optional/glpk/amd/amd_preprocess.c                 |   119 +
 optional/glpk/amd/amd_valid.c                      |    93 +
 optional/glpk/colamd/colamd.c                      |  3625 +++
 optional/glpk/colamd/colamd.h                      |    69 +
 optional/glpk/glpapi.h                             |   314 +
 optional/glpk/glpapi01.c                           |  1575 ++
 optional/glpk/glpapi02.c                           |   495 +
 optional/glpk/glpapi03.c                           |   166 +
 optional/glpk/glpapi04.c                           |   156 +
 optional/glpk/glpapi05.c                           |   172 +
 optional/glpk/glpapi06.c                           |   810 +
 optional/glpk/glpapi07.c                           |   451 +
 optional/glpk/glpapi08.c                           |   389 +
 optional/glpk/glpapi09.c                           |   741 +
 optional/glpk/glpapi10.c                           |   282 +
 optional/glpk/glpapi11.c                           |  1221 +
 optional/glpk/glpapi12.c                           |  2224 ++
 optional/glpk/glpapi13.c                           |   702 +
 optional/glpk/glpapi14.c                           |   274 +
 optional/glpk/glpapi15.c                           |   614 +
 optional/glpk/glpapi16.c                           |   329 +
 optional/glpk/glpapi17.c                           |  1048 +
 optional/glpk/glpapi18.c                           |   126 +
 optional/glpk/glpapi19.c                           |  1201 +
 optional/glpk/glpavl.c                             |   357 +
 optional/glpk/glpavl.h                             |   123 +
 optional/glpk/glpbfd.c                             |   485 +
 optional/glpk/glpbfd.h                             |    75 +
 optional/glpk/glpbfx.c                             |    91 +
 optional/glpk/glpbfx.h                             |    71 +
 optional/glpk/glpcpx.c                             |  1244 +
 optional/glpk/glpdmp.c                             |   259 +
 optional/glpk/glpdmp.h                             |    80 +
 optional/glpk/glpdmx.c                             |  1472 ++
 optional/glpk/glpenv.h                             |   228 +
 optional/glpk/glpenv01.c                           |   234 +
 optional/glpk/glpenv02.c                           |    73 +
 optional/glpk/glpenv03.c                           |   233 +
 optional/glpk/glpenv04.c                           |   118 +
 optional/glpk/glpenv05.c                           |   229 +
 optional/glpk/glpenv06.c                           |   172 +
 optional/glpk/glpenv07.c                           |   676 +
 optional/glpk/glpenv08.c                           |   156 +
 optional/glpk/glpfhv.c                             |   778 +
 optional/glpk/glpfhv.h                             |   170 +
 optional/glpk/glpgmp.c                             |  1113 +
 optional/glpk/glpgmp.h                             |   190 +
 optional/glpk/glphbm.c                             |   519 +
 optional/glpk/glphbm.h                             |   127 +
 optional/glpk/glpini01.c                           |   581 +
 optional/glpk/glpini02.c                           |   273 +
 optional/glpk/glpios.h                             |   593 +
 optional/glpk/glpios01.c                           |  1618 ++
 optional/glpk/glpios02.c                           |   829 +
 optional/glpk/glpios03.c                           |  1160 +
 optional/glpk/glpios04.c                           |   307 +
 optional/glpk/glpios05.c                           |   285 +
 optional/glpk/glpios06.c                           |  1453 ++
 optional/glpk/glpios07.c                           |   554 +
 optional/glpk/glpios08.c                           |   912 +
 optional/glpk/glpios09.c                           |   665 +
 optional/glpk/glpios10.c                           |   353 +
 optional/glpk/glpios11.c                           |   284 +
 optional/glpk/glpios12.c                           |   180 +
 optional/glpk/glpipm.c                             |  1147 +
 optional/glpk/glpipm.h                             |    36 +
 optional/glpk/glpk.h                               |  1750 ++
 optional/glpk/glpk.inc                             |     1 +
 optional/glpk/glplib.h                             |   135 +
 optional/glpk/glplib01.c                           |   287 +
 optional/glpk/glplib02.c                           |   340 +
 optional/glpk/glplib03.c                           |   696 +
 optional/glpk/glplpf.c                             |   983 +
 optional/glpk/glplpf.h                             |   194 +
 optional/glpk/glplpx01.c                           |  1546 ++
 optional/glpk/glplpx02.c                           |   268 +
 optional/glpk/glplpx03.c                           |   302 +
 optional/glpk/glpluf.c                             |  1851 ++
 optional/glpk/glpluf.h                             |   326 +
 optional/glpk/glplux.c                             |  1028 +
 optional/glpk/glplux.h                             |   221 +
 optional/glpk/glpmat.c                             |   929 +
 optional/glpk/glpmat.h                             |   198 +
 optional/glpk/glpmpl.h                             |  2583 ++
 optional/glpk/glpmpl01.c                           |  4721 ++++
 optional/glpk/glpmpl02.c                           |  1205 +
 optional/glpk/glpmpl03.c                           |  6084 +++++
 optional/glpk/glpmpl04.c                           |  1429 ++
 optional/glpk/glpmpl05.c                           |   566 +
 optional/glpk/glpmpl06.c                           |  1008 +
 optional/glpk/glpmps.c                             |  1407 ++
 optional/glpk/glpnet.h                             |    60 +
 optional/glpk/glpnet01.c                           |   301 +
 optional/glpk/glpnet02.c                           |   314 +
 optional/glpk/glpnet03.c                           |   776 +
 optional/glpk/glpnet04.c                           |   772 +
 optional/glpk/glpnet05.c                           |   367 +
 optional/glpk/glpnet06.c                           |   387 +
 optional/glpk/glpnet07.c                           |   222 +
 optional/glpk/glpnet08.c                           |   245 +
 optional/glpk/glpnet09.c                           |   239 +
 optional/glpk/glpnpp.h                             |   520 +
 optional/glpk/glpnpp01.c                           |   932 +
 optional/glpk/glpnpp02.c                           |  1433 ++
 optional/glpk/glpnpp03.c                           |  2865 +++
 optional/glpk/glpnpp04.c                           |  1419 ++
 optional/glpk/glpnpp05.c                           |   809 +
 optional/glpk/glpqmd.c                             |   584 +
 optional/glpk/glpqmd.h                             |    59 +
 optional/glpk/glprgr.c                             |   165 +
 optional/glpk/glprgr.h                             |    34 +
 optional/glpk/glprng.h                             |    68 +
 optional/glpk/glprng01.c                           |   231 +
 optional/glpk/glprng02.c                           |    76 +
 optional/glpk/glpscf.c                             |   638 +
 optional/glpk/glpscf.h                             |   126 +
 optional/glpk/glpscl.c                             |   476 +
 optional/glpk/glpsdf.c                             |   266 +
 optional/glpk/glpspm.c                             |   846 +
 optional/glpk/glpspm.h                             |   165 +
 optional/glpk/glpspx.h                             |    40 +
 optional/glpk/glpspx01.c                           |  2960 +++
 optional/glpk/glpspx02.c                           |  3084 +++
 optional/glpk/glpsql.c                             |  1631 ++
 optional/glpk/glpsql.h                             |    64 +
 optional/glpk/glpssx.h                             |   418 +
 optional/glpk/glpssx01.c                           |   844 +
 optional/glpk/glpssx02.c                           |   479 +
 optional/glpk/glpstd.h                             |    43 +
 optional/glpk/glptsp.c                             |   672 +
 optional/glpk/glptsp.h                             |   104 +
 src/DensityGrid.cpp                                |   275 +
 src/DensityGrid.h                                  |    88 +
 src/DensityGrid_3d.cpp                             |   296 +
 src/DensityGrid_3d.h                               |    88 +
 src/Makefile.am                                    |   306 +
 src/Makefile.in                                    |  7991 ++++++
 src/NetDataTypes.cpp                               |   225 +
 src/NetDataTypes.h                                 |   821 +
 src/NetRoutines.cpp                                |   278 +
 src/NetRoutines.h                                  |    61 +
 src/adjlist.c                                      |   856 +
 src/arpack.c                                       |  1344 +
 src/array.c                                        |    50 +
 src/array.pmt                                      |    90 +
 src/atlas-edges.h                                  |  1294 +
 src/atlas.c                                        |    82 +
 src/attributes.c                                   |   430 +
 src/basic_query.c                                  |    64 +
 src/bfgs.c                                         |   201 +
 src/bigint.c                                       |   315 +
 src/bigint.h                                       |   105 +
 src/bignum.c                                       |  1953 ++
 src/bignum.h                                       |   120 +
 src/bipartite.c                                    |  1118 +
 src/blas.c                                         |   104 +
 src/bliss.cc                                       |   317 +
 src/bliss_bignum.hh                                |    76 +
 src/bliss_defs.hh                                  |    52 +
 src/bliss_eqrefhash.cc                             |   143 +
 src/bliss_eqrefhash.hh                             |    58 +
 src/bliss_graph.cc                                 |  2495 ++
 src/bliss_graph.hh                                 |   236 +
 src/bliss_heap.cc                                  |    95 +
 src/bliss_heap.hh                                  |    47 +
 src/bliss_kqueue.hh                                |   144 +
 src/bliss_kstack.hh                                |    98 +
 src/bliss_orbit.cc                                 |   153 +
 src/bliss_orbit.hh                                 |    53 +
 src/bliss_partition.cc                             |   917 +
 src/bliss_partition.hh                             |   127 +
 src/bliss_timer.cc                                 |   111 +
 src/bliss_timer.hh                                 |    38 +
 src/bliss_utils.cc                                 |    60 +
 src/bliss_utils.hh                                 |    23 +
 src/cattributes.c                                  |  3718 +++
 src/centrality.c                                   |  3380 +++
 src/cliques.c                                      |  1166 +
 src/clustertool.cpp                                |   657 +
 src/cocitation.c                                   |   764 +
 src/cohesive_blocks.c                              |   567 +
 src/community.c                                    |  3520 +++
 src/complex.c                                      |   390 +
 src/components.c                                   |   838 +
 src/conversion.c                                   |   847 +
 src/cores.c                                        |   159 +
 src/cs/UFconfig.h                                  |   118 +
 src/cs/cs.h                                        |   756 +
 src/cs/cs_add.c                                    |    48 +
 src/cs/cs_amd.c                                    |   387 +
 src/cs/cs_chol.c                                   |    79 +
 src/cs/cs_cholsol.c                                |    46 +
 src/cs/cs_compress.c                               |    42 +
 src/cs/cs_counts.c                                 |    81 +
 src/cs/cs_cumsum.c                                 |    37 +
 src/cs/cs_dfs.c                                    |    56 +
 src/cs/cs_dmperm.c                                 |   164 +
 src/cs/cs_droptol.c                                |    29 +
 src/cs/cs_dropzeros.c                              |    29 +
 src/cs/cs_dupl.c                                   |    54 +
 src/cs/cs_entry.c                                  |    33 +
 src/cs/cs_ereach.c                                 |    43 +
 src/cs/cs_etree.c                                  |    50 +
 src/cs/cs_fkeep.c                                  |    45 +
 src/cs/cs_gaxpy.c                                  |    37 +
 src/cs/cs_happly.c                                 |    39 +
 src/cs/cs_house.c                                  |    50 +
 src/cs/cs_ipvec.c                                  |    29 +
 src/cs/cs_leaf.c                                   |    42 +
 src/cs/cs_load.c                                   |    46 +
 src/cs/cs_lsolve.c                                 |    38 +
 src/cs/cs_ltsolve.c                                |    38 +
 src/cs/cs_lu.c                                     |   109 +
 src/cs/cs_lusol.c                                  |    46 +
 src/cs/cs_malloc.c                                 |    57 +
 src/cs/cs_maxtrans.c                               |   112 +
 src/cs/cs_multiply.c                               |    55 +
 src/cs/cs_norm.c                                   |    36 +
 src/cs/cs_permute.c                                |    45 +
 src/cs/cs_pinv.c                                   |    31 +
 src/cs/cs_post.c                                   |    44 +
 src/cs/cs_print.c                                  |    66 +
 src/cs/cs_pvec.c                                   |    29 +
 src/cs/cs_qr.c                                     |    96 +
 src/cs/cs_qrsol.c                                  |    73 +
 src/cs/cs_randperm.c                               |    44 +
 src/cs/cs_reach.c                                  |    39 +
 src/cs/cs_scatter.c                                |    42 +
 src/cs/cs_scc.c                                    |    61 +
 src/cs/cs_schol.c                                  |    46 +
 src/cs/cs_spsolve.c                                |    48 +
 src/cs/cs_sqr.c                                    |   108 +
 src/cs/cs_symperm.c                                |    59 +
 src/cs/cs_tdfs.c                                   |    44 +
 src/cs/cs_transpose.c                              |    45 +
 src/cs/cs_updown.c                                 |    68 +
 src/cs/cs_usolve.c                                 |    38 +
 src/cs/cs_util.c                                   |   139 +
 src/cs/cs_utsolve.c                                |    38 +
 src/decomposition.c                                |   444 +
 src/distances.c                                    |   211 +
 src/dqueue.c                                       |    49 +
 src/dqueue.pmt                                     |   382 +
 src/drl_Node.h                                     |    66 +
 src/drl_Node_3d.h                                  |    66 +
 src/drl_graph.cpp                                  |  1286 +
 src/drl_graph.h                                    |   128 +
 src/drl_graph_3d.cpp                               |   854 +
 src/drl_graph_3d.h                                 |   120 +
 src/drl_layout.cpp                                 |   472 +
 src/drl_layout.h                                   |    65 +
 src/drl_layout_3d.cpp                              |   123 +
 src/drl_layout_3d.h                                |    65 +
 src/drl_parse.cpp                                  |   205 +
 src/drl_parse.h                                    |    70 +
 src/eigen.c                                        |  1453 ++
 src/evolver_cit.c                                  |   179 +
 src/f2c.h                                          |   230 +
 src/f2c/abort_.c                                   |    22 +
 src/f2c/arithchk.c                                 |   245 +
 src/f2c/backspac.c                                 |    76 +
 src/f2c/c_abs.c                                    |    20 +
 src/f2c/c_cos.c                                    |    23 +
 src/f2c/c_div.c                                    |    53 +
 src/f2c/c_exp.c                                    |    25 +
 src/f2c/c_log.c                                    |    23 +
 src/f2c/c_sin.c                                    |    23 +
 src/f2c/c_sqrt.c                                   |    41 +
 src/f2c/cabs.c                                     |    33 +
 src/f2c/close.c                                    |   101 +
 src/f2c/ctype.c                                    |     2 +
 src/f2c/d_abs.c                                    |    18 +
 src/f2c/d_acos.c                                   |    19 +
 src/f2c/d_asin.c                                   |    19 +
 src/f2c/d_atan.c                                   |    19 +
 src/f2c/d_atn2.c                                   |    19 +
 src/f2c/d_cnjg.c                                   |    19 +
 src/f2c/d_cos.c                                    |    19 +
 src/f2c/d_cosh.c                                   |    19 +
 src/f2c/d_dim.c                                    |    16 +
 src/f2c/d_exp.c                                    |    19 +
 src/f2c/d_imag.c                                   |    16 +
 src/f2c/d_int.c                                    |    19 +
 src/f2c/d_lg10.c                                   |    21 +
 src/f2c/d_log.c                                    |    19 +
 src/f2c/d_mod.c                                    |    46 +
 src/f2c/d_nint.c                                   |    20 +
 src/f2c/d_prod.c                                   |    16 +
 src/f2c/d_sign.c                                   |    18 +
 src/f2c/d_sin.c                                    |    19 +
 src/f2c/d_sinh.c                                   |    19 +
 src/f2c/d_sqrt.c                                   |    19 +
 src/f2c/d_tan.c                                    |    19 +
 src/f2c/d_tanh.c                                   |    19 +
 src/f2c/derf_.c                                    |    18 +
 src/f2c/derfc_.c                                   |    20 +
 src/f2c/dfe.c                                      |   151 +
 src/f2c/dolio.c                                    |    26 +
 src/f2c/dtime_.c                                   |    63 +
 src/f2c/due.c                                      |    77 +
 src/f2c/dummy.c                                    |     2 +
 src/f2c/ef1asc_.c                                  |    25 +
 src/f2c/ef1cmc_.c                                  |    20 +
 src/f2c/endfile.c                                  |   160 +
 src/f2c/erf_.c                                     |    22 +
 src/f2c/erfc_.c                                    |    22 +
 src/f2c/err.c                                      |   293 +
 src/f2c/etime_.c                                   |    57 +
 src/f2c/exit_.c                                    |    43 +
 src/f2c/f77_aloc.c                                 |    44 +
 src/f2c/f77vers.c                                  |    97 +
 src/f2c/fio.h                                      |   141 +
 src/f2c/fmt.c                                      |   530 +
 src/f2c/fmt.h                                      |   105 +
 src/f2c/fmtlib.c                                   |    51 +
 src/f2c/fp.h                                       |    28 +
 src/f2c/ftell_.c                                   |    52 +
 src/f2c/getenv_.c                                  |    62 +
 src/f2c/h_abs.c                                    |    18 +
 src/f2c/h_dim.c                                    |    16 +
 src/f2c/h_dnnt.c                                   |    19 +
 src/f2c/h_indx.c                                   |    32 +
 src/f2c/h_len.c                                    |    16 +
 src/f2c/h_mod.c                                    |    16 +
 src/f2c/h_nint.c                                   |    19 +
 src/f2c/h_sign.c                                   |    18 +
 src/f2c/hl_ge.c                                    |    18 +
 src/f2c/hl_gt.c                                    |    18 +
 src/f2c/hl_le.c                                    |    18 +
 src/f2c/hl_lt.c                                    |    18 +
 src/f2c/i77vers.c                                  |   343 +
 src/f2c/i_abs.c                                    |    18 +
 src/f2c/i_dim.c                                    |    16 +
 src/f2c/i_dnnt.c                                   |    19 +
 src/f2c/i_indx.c                                   |    32 +
 src/f2c/i_len.c                                    |    16 +
 src/f2c/i_mod.c                                    |    16 +
 src/f2c/i_nint.c                                   |    19 +
 src/f2c/i_sign.c                                   |    18 +
 src/f2c/iio.c                                      |   159 +
 src/f2c/ilnw.c                                     |    83 +
 src/f2c/inquire.c                                  |   117 +
 src/f2c/l_ge.c                                     |    18 +
 src/f2c/l_gt.c                                     |    18 +
 src/f2c/l_le.c                                     |    18 +
 src/f2c/l_lt.c                                     |    18 +
 src/f2c/lbitbits.c                                 |    68 +
 src/f2c/lbitshft.c                                 |    17 +
 src/f2c/lio.h                                      |    74 +
 src/f2c/lread.c                                    |   806 +
 src/f2c/lwrite.c                                   |   314 +
 src/f2c/open.c                                     |   301 +
 src/f2c/pow_ci.c                                   |    26 +
 src/f2c/pow_dd.c                                   |    19 +
 src/f2c/pow_di.c                                   |    41 +
 src/f2c/pow_hh.c                                   |    39 +
 src/f2c/pow_ii.c                                   |    39 +
 src/f2c/pow_ri.c                                   |    41 +
 src/f2c/pow_zi.c                                   |    60 +
 src/f2c/pow_zz.c                                   |    29 +
 src/f2c/r_abs.c                                    |    18 +
 src/f2c/r_acos.c                                   |    19 +
 src/f2c/r_asin.c                                   |    19 +
 src/f2c/r_atan.c                                   |    19 +
 src/f2c/r_atn2.c                                   |    19 +
 src/f2c/r_cnjg.c                                   |    18 +
 src/f2c/r_cos.c                                    |    19 +
 src/f2c/r_cosh.c                                   |    19 +
 src/f2c/r_dim.c                                    |    16 +
 src/f2c/r_exp.c                                    |    19 +
 src/f2c/r_imag.c                                   |    16 +
 src/f2c/r_int.c                                    |    19 +
 src/f2c/r_lg10.c                                   |    21 +
 src/f2c/r_log.c                                    |    19 +
 src/f2c/r_mod.c                                    |    46 +
 src/f2c/r_nint.c                                   |    20 +
 src/f2c/r_sign.c                                   |    18 +
 src/f2c/r_sin.c                                    |    19 +
 src/f2c/r_sinh.c                                   |    19 +
 src/f2c/r_sqrt.c                                   |    19 +
 src/f2c/r_tan.c                                    |    19 +
 src/f2c/r_tanh.c                                   |    19 +
 src/f2c/rdfmt.c                                    |   553 +
 src/f2c/rewind.c                                   |    30 +
 src/f2c/rsfe.c                                     |    91 +
 src/f2c/rsli.c                                     |   109 +
 src/f2c/rsne.c                                     |   618 +
 src/f2c/s_cat.c                                    |    86 +
 src/f2c/s_cmp.c                                    |    50 +
 src/f2c/s_copy.c                                   |    57 +
 src/f2c/s_paus.c                                   |    96 +
 src/f2c/s_rnge.c                                   |    32 +
 src/f2c/s_stop.c                                   |    48 +
 src/f2c/sfe.c                                      |    47 +
 src/f2c/sig_die.c                                  |    51 +
 src/f2c/signal1.h                                  |    35 +
 src/f2c/signal1.h0                                 |    35 +
 src/f2c/signal_.c                                  |    21 +
 src/f2c/signbit.c                                  |    24 +
 src/f2c/sue.c                                      |    90 +
 src/f2c/sysdep1.h                                  |    71 +
 src/f2c/sysdep1.h0                                 |    71 +
 src/f2c/system_.c                                  |    42 +
 src/f2c/typesize.c                                 |    18 +
 src/f2c/uio.c                                      |    75 +
 src/f2c/uninit.c                                   |   463 +
 src/f2c/util.c                                     |    57 +
 src/f2c/wref.c                                     |   294 +
 src/f2c/wrtfmt.c                                   |   377 +
 src/f2c/wsfe.c                                     |    78 +
 src/f2c/wsle.c                                     |    42 +
 src/f2c/wsne.c                                     |    32 +
 src/f2c/xwsne.c                                    |    77 +
 src/f2c/z_abs.c                                    |    18 +
 src/f2c/z_cos.c                                    |    21 +
 src/f2c/z_div.c                                    |    50 +
 src/f2c/z_exp.c                                    |    23 +
 src/f2c/z_log.c                                    |   121 +
 src/f2c/z_sin.c                                    |    21 +
 src/f2c/z_sqrt.c                                   |    35 +
 src/fast_community.c                               |   921 +
 src/feedback_arc_set.c                             |   643 +
 src/flow.c                                         |  2476 ++
 src/foreign-dl-header.h                            |    41 +
 src/foreign-dl-lexer.c                             |  2231 ++
 src/foreign-dl-lexer.l                             |   142 +
 src/foreign-dl-parser.c                            |  2148 ++
 src/foreign-dl-parser.h                            |   105 +
 src/foreign-dl-parser.y                            |   313 +
 src/foreign-gml-header.h                           |    30 +
 src/foreign-gml-lexer.c                            |  2054 ++
 src/foreign-gml-lexer.l                            |   102 +
 src/foreign-gml-parser.c                           |  1859 ++
 src/foreign-gml-parser.h                           |    95 +
 src/foreign-gml-parser.y                           |   262 +
 src/foreign-graphml.c                              |  1511 ++
 src/foreign-lgl-header.h                           |    35 +
 src/foreign-lgl-lexer.c                            |  2013 ++
 src/foreign-lgl-lexer.l                            |   102 +
 src/foreign-lgl-parser.c                           |  1698 ++
 src/foreign-lgl-parser.h                           |    85 +
 src/foreign-lgl-parser.y                           |   152 +
 src/foreign-ncol-header.h                          |    34 +
 src/foreign-ncol-lexer.c                           |  2008 ++
 src/foreign-ncol-lexer.l                           |   100 +
 src/foreign-ncol-parser.c                          |  1687 ++
 src/foreign-ncol-parser.h                          |    83 +
 src/foreign-ncol-parser.y                          |   146 +
 src/foreign-pajek-header.h                         |    43 +
 src/foreign-pajek-lexer.c                          |  2469 ++
 src/foreign-pajek-lexer.l                          |   148 +
 src/foreign-pajek-parser.c                         |  2817 +++
 src/foreign-pajek-parser.h                         |   179 +
 src/foreign-pajek-parser.y                         |   758 +
 src/foreign.c                                      |  3334 +++
 src/forestfire.c                                   |   264 +
 src/fortran_intrinsics.c                           |    53 +
 src/games.c                                        |  3866 +++
 src/gengraph_box_list.cpp                          |    87 +
 src/gengraph_box_list.h                            |    75 +
 src/gengraph_definitions.h                         |   191 +
 src/gengraph_degree_sequence.cpp                   |   375 +
 src/gengraph_degree_sequence.h                     |    88 +
 src/gengraph_graph_molloy_hash.cpp                 |  1043 +
 src/gengraph_graph_molloy_hash.h                   |   198 +
 src/gengraph_graph_molloy_optimized.cpp            |  2013 ++
 src/gengraph_graph_molloy_optimized.h              |   263 +
 src/gengraph_hash.h                                |   278 +
 src/gengraph_header.h                              |    86 +
 src/gengraph_mr-connected.cpp                      |   186 +
 src/gengraph_powerlaw.cpp                          |   222 +
 src/gengraph_powerlaw.h                            |    84 +
 src/gengraph_qsort.h                               |   402 +
 src/gengraph_random.cpp                            |   278 +
 src/gengraph_random.h                              |   212 +
 src/gengraph_vertex_cover.h                        |    64 +
 src/glet.c                                         |   860 +
 src/glpk_support.c                                 |    78 +
 src/gml_tree.c                                     |   259 +
 src/hacks.c                                        |    53 +
 src/heap.c                                         |  1061 +
 src/heap.pmt                                       |   345 +
 src/hrg_dendro.h                                   |   302 +
 src/hrg_graph.h                                    |   167 +
 src/hrg_graph_simp.h                               |   162 +
 src/hrg_rbtree.h                                   |   164 +
 src/hrg_splittree_eq.h                             |   185 +
 src/igraph_arpack_internal.h                       |   219 +
 src/igraph_blas_internal.h                         |    55 +
 src/igraph_buckets.c                               |   190 +
 src/igraph_error.c                                 |   285 +
 src/igraph_estack.c                                |    67 +
 src/igraph_estack.h                                |    47 +
 src/igraph_fixed_vectorlist.c                      |    76 +
 src/igraph_flow_internal.h                         |    41 +
 src/igraph_glpk_support.h                          |    48 +
 src/igraph_gml_tree.h                              |    87 +
 src/igraph_grid.c                                  |   541 +
 src/igraph_hacks_internal.h                        |    57 +
 src/igraph_hashtable.c                             |   128 +
 src/igraph_heap.c                                  |    64 +
 src/igraph_hrg.cc                                  |  1025 +
 src/igraph_hrg_types.cc                            |  3470 +++
 src/igraph_interrupt_internal.h                    |    69 +
 src/igraph_lapack_internal.h                       |   178 +
 src/igraph_marked_queue.c                          |   115 +
 src/igraph_marked_queue.h                          |    70 +
 src/igraph_math.h                                  |    82 +
 src/igraph_psumtree.c                              |    98 +
 src/igraph_set.c                                   |   310 +
 src/igraph_stack.c                                 |    83 +
 src/igraph_strvector.c                             |   590 +
 src/igraph_trie.c                                  |   389 +
 src/igraph_types_internal.h                        |   395 +
 src/infomap.cc                                     |   317 +
 src/infomap_FlowGraph.cc                           |   403 +
 src/infomap_FlowGraph.h                            |    78 +
 src/infomap_Greedy.cc                              |   609 +
 src/infomap_Greedy.h                               |    85 +
 src/infomap_Node.cc                                |    69 +
 src/infomap_Node.h                                 |    55 +
 src/interrupt.c                                    |    47 +
 src/iterators.c                                    |  1903 ++
 src/lad.c                                          |  1568 ++
 src/lapack.c                                       |   924 +
 src/lapack/arpack.inc                              |     1 +
 src/lapack/blas.inc                                |     1 +
 src/lapack/dasum.c                                 |    89 +
 src/lapack/daxpy.c                                 |    97 +
 src/lapack/dcopy.c                                 |    97 +
 src/lapack/ddot.c                                  |    99 +
 src/lapack/dgebak.c                                |   223 +
 src/lapack/dgebal.c                                |   399 +
 src/lapack/dgeev.c                                 |   552 +
 src/lapack/dgeevx.c                                |   687 +
 src/lapack/dgehd2.c                                |   180 +
 src/lapack/dgehrd.c                                |   329 +
 src/lapack/dgemm.c                                 |   378 +
 src/lapack/dgemv.c                                 |   302 +
 src/lapack/dgeqr2.c                                |   150 +
 src/lapack/dger.c                                  |   185 +
 src/lapack/dgesv.c                                 |   131 +
 src/lapack/dgetf2.c                                |   179 +
 src/lapack/dgetrf.c                                |   206 +
 src/lapack/dgetrs.c                                |   172 +
 src/lapack/dgetv0.c                                |   480 +
 src/lapack/dhseqr.c                                |   471 +
 src/lapack/disnan.c                                |    48 +
 src/lapack/dlabad.c                                |    68 +
 src/lapack/dlacn2.c                                |   253 +
 src/lapack/dlacpy.c                                |   115 +
 src/lapack/dladiv.c                                |    72 +
 src/lapack/dlae2.c                                 |   134 +
 src/lapack/dlaebz.c                                |   612 +
 src/lapack/dlaev2.c                                |   180 +
 src/lapack/dlaexc.c                                |   443 +
 src/lapack/dlagtf.c                                |   210 +
 src/lapack/dlagts.c                                |   337 +
 src/lapack/dlahqr.c                                |   614 +
 src/lapack/dlahr2.c                                |   310 +
 src/lapack/dlaisnan.c                              |    57 +
 src/lapack/dlaln2.c                                |   556 +
 src/lapack/dlamch.c                                |   169 +
 src/lapack/dlaneg.c                                |   206 +
 src/lapack/dlange.c                                |   185 +
 src/lapack/dlanhs.c                                |   191 +
 src/lapack/dlanst.c                                |   152 +
 src/lapack/dlansy.c                                |   225 +
 src/lapack/dlanv2.c                                |   225 +
 src/lapack/dlapy2.c                                |    65 +
 src/lapack/dlaqr0.c                                |   746 +
 src/lapack/dlaqr1.c                                |   116 +
 src/lapack/dlaqr2.c                                |   683 +
 src/lapack/dlaqr3.c                                |   701 +
 src/lapack/dlaqr4.c                                |   742 +
 src/lapack/dlaqr5.c                                |  1012 +
 src/lapack/dlaqrb.c                                |   602 +
 src/lapack/dlaqtr.c                                |   816 +
 src/lapack/dlar1v.c                                |   429 +
 src/lapack/dlarf.c                                 |   181 +
 src/lapack/dlarfb.c                                |   787 +
 src/lapack/dlarfg.c                                |   156 +
 src/lapack/dlarft.c                                |   345 +
 src/lapack/dlarfx.c                                |   718 +
 src/lapack/dlarnv.c                                |   132 +
 src/lapack/dlarra.c                                |   146 +
 src/lapack/dlarrb.c                                |   338 +
 src/lapack/dlarrc.c                                |   173 +
 src/lapack/dlarrd.c                                |   777 +
 src/lapack/dlarre.c                                |   848 +
 src/lapack/dlarrf.c                                |   419 +
 src/lapack/dlarrj.c                                |   328 +
 src/lapack/dlarrk.c                                |   181 +
 src/lapack/dlarrr.c                                |   164 +
 src/lapack/dlarrv.c                                |   973 +
 src/lapack/dlartg.c                                |   176 +
 src/lapack/dlaruv.c                                |   178 +
 src/lapack/dlascl.c                                |   340 +
 src/lapack/dlaset.c                                |   142 +
 src/lapack/dlasq2.c                                |   588 +
 src/lapack/dlasq3.c                                |   348 +
 src/lapack/dlasq4.c                                |   395 +
 src/lapack/dlasq5.c                                |   229 +
 src/lapack/dlasq6.c                                |   199 +
 src/lapack/dlasr.c                                 |   439 +
 src/lapack/dlasrt.c                                |   272 +
 src/lapack/dlassq.c                                |   106 +
 src/lapack/dlaswp.c                                |   152 +
 src/lapack/dlasy2.c                                |   460 +
 src/lapack/dlatrd.c                                |   341 +
 src/lapack/dmout.c                                 |   393 +
 src/lapack/dnaitr.c                                |   950 +
 src/lapack/dnapps.c                                |   795 +
 src/lapack/dnaup2.c                                |   978 +
 src/lapack/dnaupd.c                                |   794 +
 src/lapack/dnconv.c                                |   178 +
 src/lapack/dneigh.c                                |   377 +
 src/lapack/dneupd.c                                |  1195 +
 src/lapack/dngets.c                                |   275 +
 src/lapack/dnrm2.c                                 |    88 +
 src/lapack/dorg2r.c                                |   163 +
 src/lapack/dorghr.c                                |   203 +
 src/lapack/dorgqr.c                                |   269 +
 src/lapack/dorm2l.c                                |   217 +
 src/lapack/dorm2r.c                                |   221 +
 src/lapack/dormhr.c                                |   247 +
 src/lapack/dormql.c                                |   313 +
 src/lapack/dormqr.c                                |   313 +
 src/lapack/dormtr.c                                |   287 +
 src/lapack/drot.c                                  |    81 +
 src/lapack/dsaitr.c                                |   950 +
 src/lapack/dsapps.c                                |   621 +
 src/lapack/dsaup2.c                                |   976 +
 src/lapack/dsaupd.c                                |   792 +
 src/lapack/dscal.c                                 |    86 +
 src/lapack/dsconv.c                                |   168 +
 src/lapack/dseigt.c                                |   221 +
 src/lapack/dsesrt.c                                |   288 +
 src/lapack/dseupd.c                                |  1046 +
 src/lapack/dsgets.c                                |   259 +
 src/lapack/dsortc.c                                |   406 +
 src/lapack/dsortr.c                                |   268 +
 src/lapack/dstatn.c                                |    83 +
 src/lapack/dstats.c                                |    64 +
 src/lapack/dstebz.c                                |   758 +
 src/lapack/dstein.c                                |   436 +
 src/lapack/dstemr.c                                |   713 +
 src/lapack/dsteqr.c                                |   607 +
 src/lapack/dsterf.c                                |   453 +
 src/lapack/dstqrb.c                                |   691 +
 src/lapack/dswap.c                                 |   104 +
 src/lapack/dsyevr.c                                |   644 +
 src/lapack/dsymv.c                                 |   303 +
 src/lapack/dsyr2.c                                 |   264 +
 src/lapack/dsyr2k.c                                |   396 +
 src/lapack/dsytd2.c                                |   292 +
 src/lapack/dsytrd.c                                |   348 +
 src/lapack/dtrevc.c                                |  1212 +
 src/lapack/dtrexc.c                                |   389 +
 src/lapack/dtrmm.c                                 |   442 +
 src/lapack/dtrmv.c                                 |   335 +
 src/lapack/dtrsen.c                                |   514 +
 src/lapack/dtrsm.c                                 |   479 +
 src/lapack/dtrsna.c                                |   590 +
 src/lapack/dtrsyl.c                                |  1302 +
 src/lapack/dvout.c                                 |   277 +
 src/lapack/idamax.c                                |    82 +
 src/lapack/ieeeck.c                                |   164 +
 src/lapack/iladlc.c                                |    79 +
 src/lapack/iladlr.c                                |    78 +
 src/lapack/ilaenv.c                                |   644 +
 src/lapack/iparmq.c                                |   275 +
 src/lapack/ivout.c                                 |   278 +
 src/lapack/lapack.inc                              |     2 +
 src/lapack/len_trim.c                              |    36 +
 src/lapack/lsame.c                                 |   111 +
 src/lapack/second.c                                |    42 +
 src/lapack/xerbla.c                                |    78 +
 src/layout.c                                       |  3193 +++
 src/matching.c                                     |   991 +
 src/math.c                                         |   248 +
 src/matrix.c                                       |   150 +
 src/matrix.pmt                                     |  1607 ++
 src/maximal_cliques.c                              |   406 +
 src/maximal_cliques_template.h                     |   346 +
 src/memory.c                                       |    75 +
 src/microscopic_update.c                           |  1191 +
 src/mixing.c                                       |   298 +
 src/motifs.c                                       |  1088 +
 src/operators.c                                    |  1215 +
 src/optimal_modularity.c                           |   260 +
 src/other.c                                        |   417 +
 src/plfit/arithmetic_ansi.h                        |   133 +
 src/plfit/arithmetic_sse_double.h                  |   294 +
 src/plfit/arithmetic_sse_float.h                   |   291 +
 src/plfit/error.c                                  |    74 +
 src/plfit/error.h                                  |    86 +
 src/plfit/gss.c                                    |   154 +
 src/plfit/gss.h                                    |   146 +
 src/plfit/kolmogorov.c                             |    66 +
 src/plfit/kolmogorov.h                             |    43 +
 src/plfit/lbfgs.c                                  |  1378 ++
 src/plfit/lbfgs.h                                  |   736 +
 src/plfit/options.c                                |    47 +
 src/plfit/platform.h                               |    54 +
 src/plfit/plfit.c                                  |   778 +
 src/plfit/plfit.h                                  |   109 +
 src/plfit/plfit.inc                                |     9 +
 src/plfit/zeta.c                                   |   154 +
 src/plfit/zeta.h                                   |    53 +
 src/pottsmodel_2.cpp                               |  2302 ++
 src/pottsmodel_2.h                                 |   165 +
 src/progress.c                                     |   152 +
 src/prpack.cpp                                     |    98 +
 src/prpack.h                                       |    54 +
 src/prpack/prpack.h                                |    11 +
 src/prpack/prpack.inc                              |    23 +
 src/prpack/prpack_base_graph.cpp                   |   333 +
 src/prpack/prpack_base_graph.h                     |    42 +
 src/prpack/prpack_csc.h                            |    25 +
 src/prpack/prpack_csr.h                            |    16 +
 src/prpack/prpack_edge_list.h                      |    16 +
 src/prpack/prpack_igraph_graph.cpp                 |   146 +
 src/prpack/prpack_igraph_graph.h                   |    26 +
 src/prpack/prpack_preprocessed_ge_graph.cpp        |    64 +
 src/prpack/prpack_preprocessed_ge_graph.h          |    26 +
 src/prpack/prpack_preprocessed_graph.h             |    17 +
 src/prpack/prpack_preprocessed_gs_graph.cpp        |    81 +
 src/prpack/prpack_preprocessed_gs_graph.h          |    30 +
 src/prpack/prpack_preprocessed_scc_graph.cpp       |   202 +
 src/prpack/prpack_preprocessed_scc_graph.h         |    39 +
 src/prpack/prpack_preprocessed_schur_graph.cpp     |   121 +
 src/prpack/prpack_preprocessed_schur_graph.h       |    33 +
 src/prpack/prpack_result.cpp                       |    12 +
 src/prpack/prpack_result.h                         |    27 +
 src/prpack/prpack_solver.cpp                       |   877 +
 src/prpack/prpack_solver.h                         |   178 +
 src/prpack/prpack_utils.cpp                        |    61 +
 src/prpack/prpack_utils.h                          |    34 +
 src/qsort.c                                        |   212 +
 src/qsort_r.c                                      |     8 +
 src/random.c                                       |  2094 ++
 src/revolver_cit.c                                 |  6479 +++++
 src/revolver_grow.c                                |  1284 +
 src/revolver_ml_cit.c                              |  3548 +++
 src/sbm.c                                          |   214 +
 src/scg.c                                          |  2252 ++
 src/scg_approximate_methods.c                      |   167 +
 src/scg_exact_scg.c                                |    66 +
 src/scg_headers.h                                  |   128 +
 src/scg_kmeans.c                                   |    93 +
 src/scg_optimal_method.c                           |   228 +
 src/scg_utils.c                                    |    92 +
 src/separators.c                                   |   814 +
 src/sir.c                                          |   257 +
 src/spanning_trees.c                               |   368 +
 src/sparsemat.c                                    |  2673 ++
 src/spectral_properties.c                          |   435 +
 src/spmatrix.c                                     |  1004 +
 src/st-cuts.c                                      |  1510 ++
 src/stack.pmt                                      |   291 +
 src/statusbar.c                                    |   130 +
 src/structural_properties.c                        |  6771 +++++
 src/structure_generators.c                         |  2288 ++
 src/sugiyama.c                                     |  1309 +
 src/topology.c                                     |  2955 +++
 src/triangles.c                                    |   925 +
 src/triangles_template.h                           |   110 +
 src/triangles_template1.h                          |    93 +
 src/type_indexededgelist.c                         |  1702 ++
 src/types.c                                        |   146 +
 src/vector.c                                       |   434 +
 src/vector.pmt                                     |  2644 ++
 src/vector_ptr.c                                   |   620 +
 src/version.c                                      |    67 +
 src/visitors.c                                     |   533 +
 src/walktrap.cpp                                   |   173 +
 src/walktrap_communities.cpp                       |   843 +
 src/walktrap_communities.h                         |   175 +
 src/walktrap_graph.cpp                             |   240 +
 src/walktrap_graph.h                               |   107 +
 src/walktrap_heap.cpp                              |   223 +
 src/walktrap_heap.h                                |   133 +
 src/zeroin.c                                       |   203 +
 tests/Makefile.am                                  |    44 +
 tests/Makefile.in                                  |   484 +
 tests/arpack.at                                    |    68 +
 tests/atlocal.in                                   |    11 +
 tests/attributes.at                                |    44 +
 tests/basic.at                                     |    81 +
 tests/bipartite.at                                 |    33 +
 tests/centralization.at                            |    27 +
 tests/cliques.at                                   |    61 +
 tests/community.at                                 |    91 +
 tests/components.at                                |    34 +
 tests/conversion.at                                |    40 +
 tests/eigen.at                                     |    59 +
 tests/flow.at                                      |    66 +
 tests/foreign.at                                   |   114 +
 tests/hrg.at                                       |    37 +
 tests/iterators.at                                 |    57 +
 tests/layout.at                                    |    69 +
 tests/matching.at                                  |    26 +
 tests/microscopic.at                               |    41 +
 tests/motifs.at                                    |    27 +
 tests/mt.at                                        |    33 +
 tests/operators.at                                 |    65 +
 tests/other.at                                     |    32 +
 tests/package.m4                                   |     6 +
 tests/qsort.at                                     |    32 +
 tests/random.at                                    |    48 +
 tests/scg.at                                       |    79 +
 tests/separators.at                                |    53 +
 tests/structural_properties.at                     |   213 +
 tests/structure_generators.at                      |   122 +
 tests/testsuite                                    | 17988 ++++++++++++++
 tests/testsuite.at                                 |    62 +
 tests/topology.at                                  |    48 +
 tests/types.at                                     |   199 +
 tests/version.at                                   |    29 +
 tests/visitors.at                                  |    33 +
 tools/autoconf/ax_tls.m4                           |    76 +
 ylwrap                                             |   247 +
 1374 files changed, 510999 insertions(+), 190 deletions(-)

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