This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository varscan.
commit a87b07a8bb3cd398ad1d2290ce37fdebbebaa88f Author: Andreas Tille <[email protected]> Date: Tue Sep 16 14:35:41 2014 +0200 patch was applied upstream --- debian/changelog | 2 +- debian/patches/fix_convert.patch | 23 ----------------------- debian/patches/series | 1 - 3 files changed, 1 insertion(+), 25 deletions(-) diff --git a/debian/changelog b/debian/changelog index 4b75055..27ed355 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,6 +1,6 @@ varscan (2.3.7+dfsg-1) UNRELEASED; urgency=medium - * New upstream version + * New upstream version (patch was applied upstream) -- Andreas Tille <[email protected]> Tue, 16 Sep 2014 14:12:50 +0200 diff --git a/debian/patches/fix_convert.patch b/debian/patches/fix_convert.patch deleted file mode 100644 index 8ac6246..0000000 --- a/debian/patches/fix_convert.patch +++ /dev/null @@ -1,23 +0,0 @@ -Author: Olivier Sallou <[email protected]> -Subject: upstream error in conversion -Description: there is a not allowed conversion between double and float -Forwarded: yes -Last-Updated: 2014-04-17 ---- a/net/sf/varscan/CopyCaller.java -+++ b/net/sf/varscan/CopyCaller.java -@@ -253,7 +253,7 @@ public class CopyCaller { - int gcBin = (int) gcContent; - if(gcBin >= 0 && gcBin <= 100) - { -- gcLogSum[gcBin] += logratio; -+ gcLogSum[gcBin] += (float) logratio; - gcLogNum[gcBin]++; - } - } -@@ -576,4 +576,4 @@ public class CopyCaller { - return(regionRef + "\t" + regionStart + "\t" + regionStop + "\t" + regionCalls + "\t" + regionDepthNormal + "\t" + regionDepthTumor + "\t" + log2ratio); - - } --} -\ No newline at end of file -+} diff --git a/debian/patches/series b/debian/patches/series index ff6eedb..209ce4a 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -1,2 +1 @@ -fix_convert.patch usage.patch -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/varscan.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
